Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch7g1280 | ATGTGGGAGCAGCCCGCCTCCGTGTTGTGGTCATTACTTTCCATTCTTACACTAATGTTGTCCATTCTATTCCTGGCAAGAACTCTAAAAAATAAAAAGTATAGGGAAGGGGGAGATGAGGATCAGAGGGCATACAGATTTCCTCCAGGGAGAAGAAGCTGGCCTGTTATAGGTGATAGCTTCAACTGGTACAGTGCTGTTGCAAGCTCTCACCCCCCCAAGTATGTTGAAGAACAGGTCAAAAGGTACGGGAAGATCTTCTCGTGCCGTGTGTTTGGAAAGTGGGCAGTGGTATCCGCAGATCCAGTGTTTAACCGTTATGTGATGCAAAACGAAGGGAAATTGTTCCAATCCAGCTATCCCAAATCTTTCAGAGATTTGGTAGGGATGAACGGTGTCATCACAGTACAAGGGGAACAACAAAGAAAACTGCATGCAATTGCCTGCAATATGATGCGTGTGCACAAGCACAAAGTACTCAACTTTCCGTTCCTACAACATATTCAAACCATAATCATCCATACCTTGTGCAGTTTCAGTTTCCCTAACCATCAAGTGGTATATCTACAAGATGTTTGCAGAAAGGCTACAATTAATCTGATGGTAACTCAGCTATTGGGTGTGTCGAGTGACTCGGAAGTGAATGAGATAAGTCGGTTATTTTACGACTTCGTTGATGGCTGTCTATCTATTCCTATCAACTTACCCGGCTTTGCTTATTACACGGCCATGAAGGCAAGGGAGCAAATCATAAGCATAATTAATAAGAAAATAGAGATGCACAAGTCGGGCGTAGCACTGGAAGCGAGTGGACAGGGAGTGCTCGCAACACTATTAGAGGAGCAAAACTTATCTGATGAGGCAGTTTCAGATTTCATCATCAATCTTCTTTTCGCCGGTAACGAAACAACTTCTAAAACAATGCTTTTCGCGGTCTATTTCCTAACCCACTCGCCTAAAGCAACGCAGCAACTATTGGATGAACAAGATACTTTAAGAAACAAGTATGGAGATAATACGATCACGTGGCAAGATTACGAATCAATGCCCTTTACCCAGTGTGTTATTGATGAGACACTTCGACTTGGTGGAATTGCAATTTGGTTGATGAGAGAGGCAAAAGAAGAGATTAAGTATTTAGATTACGTGATTCCGAAGGGATCCTTTGTTGTTCCGTTTCTTTCTGCCGTACATTTGGACGAGAGTGTATATGAGGGAGCTTTAACTTTCAACCCCTGGAGATGGATGGAGCTTAAAAATCAGAAAACGAGGAATTGGAGGAGTAGCCCATTCTTTGCTCCATTCGGAGGAGGTGCCAGATTTTGTCCGGGGGCAGAATTAGCACGTCTTCAAATTGCTTTATTTCTGCACCACTTTGTTACCAAGTATAGGTGGACCCAACTTAAAGCAGATCGGATGTCTTTCTTTCCCTCTGCTCGGCTAGTCAATGGCTTCCAAATTCGTTTGGAGAGATGGGAGCACTAA | 1485 | 43.43 | MWEQPASVLWSLLSILTLMLSILFLARTLKNKKYREGGDEDQRAYRFPPGRRSWPVIGDSFNWYSAVASSHPPKYVEEQVKRYGKIFSCRVFGKWAVVSADPVFNRYVMQNEGKLFQSSYPKSFRDLVGMNGVITVQGEQQRKLHAIACNMMRVHKHKVLNFPFLQHIQTIIIHTLCSFSFPNHQVVYLQDVCRKATINLMVTQLLGVSSDSEVNEISRLFYDFVDGCLSIPINLPGFAYYTAMKAREQIISIINKKIEMHKSGVALEASGQGVLATLLEEQNLSDEAVSDFIINLLFAGNETTSKTMLFAVYFLTHSPKATQQLLDEQDTLRNKYGDNTITWQDYESMPFTQCVIDETLRLGGIAIWLMREAKEEIKYLDYVIPKGSFVVPFLSAVHLDESVYEGALTFNPWRWMELKNQKTRNWRSSPFFAPFGGGARFCPGAELARLQIALFLHHFVTKYRWTQLKADRMSFFPSARLVNGFQIRLERWEH | 494 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 16283943 | 16288402 | - | MC07g0871 | Mch7g1280 | 693618 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch7g1280 | 494 | CDD | CYP90-like | 79 | 491 | - | - | |
| Mch7g1280 | 494 | Gene3D | Cytochrome P450 | 38 | 491 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g1280 | 494 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 435 | 444 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch7g1280 | 494 | PRINTS | E-class P450 group IV signature | 290 | 316 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g1280 | 494 | PRINTS | E-class P450 group IV signature | 398 | 416 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g1280 | 494 | PRINTS | E-class P450 group IV signature | 426 | 442 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g1280 | 494 | PRINTS | E-class P450 group IV signature | 349 | 365 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g1280 | 494 | PRINTS | E-class P450 group IV signature | 442 | 460 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g1280 | 494 | PRINTS | E-class P450 group IV signature | 382 | 396 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g1280 | 494 | PRINTS | E-class P450 group IV signature | 74 | 97 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g1280 | 494 | PANTHER | CYTOCHROME P450 26 | 46 | 463 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER) | |
| Mch7g1280 | 494 | Pfam | Cytochrome P450 | 48 | 471 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g1280 | 494 | SUPERFAMILY | Cytochrome P450 | 43 | 490 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g1280 | 494 | PRINTS | P450 superfamily signature | 442 | 453 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g1280 | 494 | PRINTS | P450 superfamily signature | 299 | 316 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g1280 | 494 | PRINTS | P450 superfamily signature | 354 | 365 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch7g1280 | 494 | PRINTS | P450 superfamily signature | 433 | 442 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch1g2021 | Mch-Chr1:19686684 | Mch7g1280 | Mch-Chr7:16283943 | 4.32E-16 | dispersed | |
| Mch7g1280 | Mch-Chr7:16283943 | Mch9g1476 | Mch-Chr9:17187767 | 1.89E-90 | dispersed | |
| Mch7g1280 | Mch-Chr7:16283943 | Mch9g0259 | Mch-Chr9:1937654 | 1.25E-83 | transposed |
Pathway information