Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0003 ATGGATCTGGAAAGCGGAGTTTATCCGAAATACGCCAAGAAGGAATCATGGAAGACAGTTCTGACTCTAGCTTTTCAAAGTCTTGGTGTTGTCTATGGTGATTTAAGCACTTCACCTCTTTACGTGTATAGGAACACTTTTGCTGAAGAAGACATTGAGCATTCAAAGACCAACGAAGAGATATATGGCGTTCTGTCATTCGTTTTCTGGACCCTTACCATTGTCCCTTTGCTCAAATATGTATTTATTGTGCTCAAAGCCGACGATAATGGTGAAGGAGGGACTTTTGCTCTCTACTCATTGTTGTGTCGACACGCCCGAGTCAGCTCGCTGCCCAATGTTCAAGCAGCAGACGAGGAGCTAGCTGAGTACAAGAAGGAAAGCATAATTTTACCACCCAAAAAAAGCTTCGCATGCAAGCTGAAATCCTCGTTAGAAACGTATAAGGTATTGCAGAGATTTTTGCTCATTCTGGCGTTGATTGGGACATGTATGGTGATTGGCGATGGCATCCTAACGCCTGCTATTTCTGTTTTTTCCGCTGTCTCTGGGCTGGAGTTTACGATGTCAAAAGAGCATCATAAATATGTGGAAGTTCCAGCTGCGTGCATCATACTGATAGGCTTGTTCGCCCTTCAACATTATGGAACCCACAGGGTCGGATTCTTGTTTGCTCCTATAGTTACAACATGGCTTTTGTGCATTTGTGCAATTGGTTTATACAATGTCATTCACTGGAACCCTCATGTTTATCAAGCACTTTCACCTTATTATATGTTCCAATTCTTGAAGAAAACACAAAGAGGAGGTTGGATGTCACTAGGAGGGATTCTGCTTTGTATAACTGGTTCAGAAGCTATGTTTGCTGATCTTGGACACTTTTCACAATCATCCATCCAGATGGCATTTACCTTCATGGTCTATCCATCTTTGGTTCTAGCTTATATGGGACAGGCTGCCTATCTTTCTCAACATCATTCGATACCAAGTGATTATCGAATTGGATTCTATATATCTGTTCCAGAGAAGTTACGATGGCCTGTTCTGGTAATTGCCATACTTGCTGCTGTAGTAGGAAGCCAGGCCATTATCACTGGAACTTTCTCGATCATTAAGCAATGTTCTGCATTGAATTGCTTCCCCAGAGTCAAAATAGTTCATACATCATCTAAAATGCACGGTCAAATTTATATCCCTGAGATAAATTGGATCTTGATGCTGTTATGCCTGGCTGTAACAATTGGTTTCAGAGATACAAAGCGCTTGGGTAATGCATCAGGCTTGGCAGTAATCACAGTGATGTTGGTCACTACCTGCTTAATGTCTTTAGTCATTGTCCTTTGCTGGCACCGGAGTGTTGTCCTTGCAATTTGCTTTGTGCTCTTCTTTGGCTCTATTGAAGCCATGTATTTTTCAGCTTCTCTCATTAAGTTTCTAGAAGGAGCATGGGTTCCCATCGCGCTTGCTATGGTCTTCATGATTATTATGTATGTCTGGCACTATGGGACACTGAAGAAGTACGAATTTGATTTTCAAAACAAGGTCTCAATCAATTGGTTGCTTAGTGCGGGATCCAGCCTGGGCATTGTACGTGTCCGTGGGATTGGCATTGTGCATACTGAACTTGTGTCAGGAATCCCAGCAATATTTTCACACTTCGTCACCAACCTTCCTGCCTTTCACCAGGTCCTTGTTTTTCTTTGCATCAAATCTGTCCCAGTTCCACACGTTCAACCTGAAGAGCGTTTCCTAGTTGGTCGAATTGGGCCTGATGAGTTTAGGTTGTATAGGTGCATTGTTCGATATGGATACAGAGATGTGCACAAGGATGATACAGAGTTTGAAAAGGATCTTGTATGTAGTATAGCTGAGTTGATTAGGTCGGAGAACATGGAATCCAGTTGTGATGATATTTTGAAGGAAAATGACAAAATGACAGTAGTTGGAACGTGTTGTACGCATACGGATGGAATTCAAATGAAAGAGGATGATGAAGAGTTCGGTGGAACATCGGAGCAGAGGGAAATAAGGTCACCGAGGAAGAGGGTGAGGTTTATTCTCCCAGAGAGTCCAAAAATTGAGCAGACAGCAATGGAGGAACTGCAGGAGCTAATGGAAGCAAGGGAAGCAGGAGTTGCATACATTTTGGGTCGCGCGCACACGAAAGCAAAGCAAGGATCGAGCATGATAAGAAAGCTTATAATTAATTATGGGTATGAATTGTTGAGGAGGAATAGCAAGGGACCAAACTACCCCCTCAATTCACCACATGCGTCTACTCTGGAGGTAGGAATGATGTACCATCTCTGA 2310 42.77 MDLESGVYPKYAKKESWKTVLTLAFQSLGVVYGDLSTSPLYVYRNTFAEEDIEHSKTNEEIYGVLSFVFWTLTIVPLLKYVFIVLKADDNGEGGTFALYSLLCRHARVSSLPNVQAADEELAEYKKESIILPPKKSFACKLKSSLETYKVLQRFLLILALIGTCMVIGDGILTPAISVFSAVSGLEFTMSKEHHKYVEVPAACIILIGLFALQHYGTHRVGFLFAPIVTTWLLCICAIGLYNVIHWNPHVYQALSPYYMFQFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQSSIQMAFTFMVYPSLVLAYMGQAAYLSQHHSIPSDYRIGFYISVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALNCFPRVKIVHTSSKMHGQIYIPEINWILMLLCLAVTIGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHRSVVLAICFVLFFGSIEAMYFSASLIKFLEGAWVPIALAMVFMIIMYVWHYGTLKKYEFDFQNKVSINWLLSAGSSLGIVRVRGIGIVHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVQPEERFLVGRIGPDEFRLYRCIVRYGYRDVHKDDTEFEKDLVCSIAELIRSENMESSCDDILKENDKMTVVGTCCTHTDGIQMKEDDEEFGGTSEQREIRSPRKRVRFILPESPKIEQTAMEELQELMEAREAGVAYILGRAHTKAKQGSSMIRKLIINYGYELLRRNSKGPNYPLNSPHASTLEVGMMYHL 769
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 16589 25517 - MC08g0003 Mch8g0003 693624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0003 769 NCBIfam potassium uptake protein 23 768 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch8g0003 769 Pfam K+ potassium transporter C-terminal domain 534 768 IPR053952 -
Mch8g0003 769 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 768 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch8g0003 769 Pfam K+ potassium transporter integral membrane domain 23 521 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g2231 Mch-Chr4:23901843 Mch8g0003 Mch-Chr8:16589 0 dispersed
Mch8g0003 Mch-Chr8:16589 Mch8g1541 Mch-Chr8:12004197 0 dispersed
Mch8g0003 Mch-Chr8:16589 Mch8g0004 Mch-Chr8:31398 1.34E-225 tandem
Mch3g0086 Mch-Chr3:999555 Mch8g0003 Mch-Chr8:16589 5.37E-286 transposed
Mch9g1394 Mch-Chr9:16369844 Mch8g0003 Mch-Chr8:16589 0 transposed
Mch8g0003 Mch-Chr8:16589 Mch9g2225 Mch-Chr9:22729277 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0003 K03549 - rcu:8261016 1270.76