Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0004 ATGGACCAAGGAGATCGAATTGAAGAAGGTAGCTCGAGATTGCTGGGGGATAATAGCTTTGGTGGCAGCAGTAATGATTACAGGTGGGTTGACGGCAGTGAACTGGACTCCGAGTCGCCTCCATGGTCTCTGTTTGAAGAAAGAGAAAGTGGGGAAGGATATGGATCTGTGAGAAGGAGGTTGGTAAAGAAGCCCAAGAGAGTTGATTCTTTTGATGTTGAAGCAATGGAGATTGCCGGTGCCAACTATCACCATTTAAAGGATGTTTCCACTTGGCAAACTCTTGCTATAGCATTCCAAACGCTTGGCGTTGTGTATGGTGACATGGGTACAAGTCCATTGTACGTCTTTTCTGATGTATTCAGCAAGGTGCATATTGAGGCAGATGTTGACGTCCTGGGGGCTCTATCCTTAGTGATTTACACAATTGCTCTTATTCCTTTGGCAAAGTATGTTTTTGTAGTGCTTAGAGCCAACGACAATGGTGAAGGAGGAACATTCGCGTTGTATTCACTGATCTGTAGGTATGCGAAAGTTAACTTGCTGCCCAACCGTCAGCCAGCTGACGAACATATCTCAAGTTTTAAGCTCAAACTACCCACTCCAGAGTTGGAAAGGGCTTTACATATTAAAGAGACTCTGGAGAAGAGATCGTCCTTGAAAACTCTTTTATTACTGCTGGTTCTGATGGGCACTTCACTGATTATAGGGGATGGTATTCTGACCCCAGCAATATCAGTGATGTCTGCTGTGAGTGGTCTGCAGGGACAGATAAAGGAATTTGATACAAATGCTGTTGTTATTGTTTCAATTATAGTCCTTGTGGTTTTATTCAGCATACAGAAATTTGGGACCGGTAGAGTGGGATTTATGTTTGCTCCTGTGCTTGCTTTGTGGTTTTTTAGTCTAGGATCTATTGGAACTTACAATCTAGTGAAGTATGATATCACCGTCGTAAGGGCTCTCAATCCTGCTTACATCTATTTATTTTTCAAGAAGAATTCAAAGAATGCATGGTCAGCCCTCGGTGGTTGTGTTTTGTGCGTAACAGGAGCTGAAGCAATGTTTGCTGATCTAGGCCATTTCACTGTGCCAGCCATACAGATTGCCTTCACATGTGTGGTTTTCCCATGCCTTCTCTTGGCTTACATGGGTCAGGCTGCTTATCTTATGAAACATCCAGATTCTGCAGCAAGAATATTCTATGATTCTGTGCCAGCAAGTCTTTTTTGGCCAGTCTTTGTGGTAGCAGCACTTGCTGCTATGATTGCGAGTCAAGCAATGATATCTGCAACCTTCTCTTGTGTCAAGCAATCTATGGCTCTTGGATGTTTTCCGAGAATGAAGATAGTTCACACCTCTAAGAGACGAATGGGTCAAATTTACATCCCTGTGATCAATTGGTTTTTGATGATAATGTGCGTACTTGTCGTTGCAATATTTCGAAGGACCACAGACATTGCAAATGCTTATGGTATTGCTGAAGTTGGTGTGATGATGGTGAGCACTGTCCTAGTGACTCTAGTAATGCTGCTGATATGGCAGACTAATCTGTTTCTTGCGTTGTGTTTCCCACTTGTATTTGGGTTTGTGGAATTCATCTACTTATCTGCAGTGTTATCAAAAATCAGAGAGGGTGGGTGGCTGCCACTTGCTTTTGCTTCTGTCTTCCTCTCTGTGATGTACACGTGGAACTATGGGAGTGTGTTGAAGTACCAAAGTGAGGTGAGAGAGAAGATATCCATGGATTTCTTGCTCGAACTCGGATCTACCCTCGGAACTGTTAGAGTTCCAGGAATTGGTCTCCTCTACAATGAGCTTGTCCAAGGCATTCCTGCAATTTTTGGGCAGTTTCTTCTTAGCCTTCCAGCCATCCACTCGACGATTGTGTTTGTGTGCATCAAATATGTTCCAATCCCAGTGGTCCCGCAAGAGGAAAGGTTTTTGTTTAGAAGGGTTGGGCCAAAGGATTACCATATATTTCGTTGCATAGCGAGATATGGATACAAGGATGTGCGGAAGGAAGATCACCATGCATTTGAGCAACTTTTGATGGAAAGCCTTGAGCAATTCTTAAGAAAGGAGGCTCAGGATCTTGCCCTGGAGAGCAACTTGAATGAGTTGGAATTTGATAATATTTCAGAGAGGTCGCGGGATTCTCCAACTCCAGGTATTGTTGACGTGAATGAGCAGCTAAGAATTCCATTGATCGAAGAGGCAAAAACTATTAGCTCGGAAGAAGCTTTTGGGGTACGGTTGCCATCCAGTATTATGGCATCAGATGAAGACCCTAGTTTGGAGTATGATCTTTCAGCTCTTCGGGAAGCAATGGATTCAGGATTTACGTATCTGCTGGCACAAGGGGATGTCCGAGCCAAAAAAAACTCATTTTTTATTAAGAAGCTTCTTATAAACTATTTCTATGCCTTCTTAAGGAGGAACTGTAGAGGTGGTGCAGCGACAATGCGAGTTCCTCACATGAATATCATGCAAGTTGGGATGACCTACATGGTTTGA 2517 43.35 MDQGDRIEEGSSRLLGDNSFGGSSNDYRWVDGSELDSESPPWSLFEERESGEGYGSVRRRLVKKPKRVDSFDVEAMEIAGANYHHLKDVSTWQTLAIAFQTLGVVYGDMGTSPLYVFSDVFSKVHIEADVDVLGALSLVIYTIALIPLAKYVFVVLRANDNGEGGTFALYSLICRYAKVNLLPNRQPADEHISSFKLKLPTPELERALHIKETLEKRSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGQIKEFDTNAVVIVSIIVLVVLFSIQKFGTGRVGFMFAPVLALWFFSLGSIGTYNLVKYDITVVRALNPAYIYLFFKKNSKNAWSALGGCVLCVTGAEAMFADLGHFTVPAIQIAFTCVVFPCLLLAYMGQAAYLMKHPDSAARIFYDSVPASLFWPVFVVAALAAMIASQAMISATFSCVKQSMALGCFPRMKIVHTSKRRMGQIYIPVINWFLMIMCVLVVAIFRRTTDIANAYGIAEVGVMMVSTVLVTLVMLLIWQTNLFLALCFPLVFGFVEFIYLSAVLSKIREGGWLPLAFASVFLSVMYTWNYGSVLKYQSEVREKISMDFLLELGSTLGTVRVPGIGLLYNELVQGIPAIFGQFLLSLPAIHSTIVFVCIKYVPIPVVPQEERFLFRRVGPKDYHIFRCIARYGYKDVRKEDHHAFEQLLMESLEQFLRKEAQDLALESNLNELEFDNISERSRDSPTPGIVDVNEQLRIPLIEEAKTISSEEAFGVRLPSSIMASDEDPSLEYDLSALREAMDSGFTYLLAQGDVRAKKNSFFIKKLLINYFYAFLRRNCRGGAATMRVPHMNIMQVGMTYMV 838
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 31398 37913 - MC08g0004 Mch8g0004 693625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0004 838 NCBIfam potassium uptake protein 97 838 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch8g0004 838 Pfam K+ potassium transporter C-terminal domain 598 836 IPR053952 -
Mch8g0004 838 Pfam K+ potassium transporter integral membrane domain 98 586 IPR053951 -
Mch8g0004 838 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 78 838 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch8g0004 838 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0337 Mch-Chr10:2237423 Mch8g0004 Mch-Chr8:31398 1.98e-312 dispersed
Mch8g0004 Mch-Chr8:31398 Mch8g2202 Mch-Chr8:25070505 1.44E-229 dispersed
Mch8g0003 Mch-Chr8:16589 Mch8g0004 Mch-Chr8:31398 1.34E-225 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0004 K03549 - csv:101202804 1461.05