Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0005 ATGGCTGCTCGGAGGATATCCTCGCTCTTATCTCGTTCCCTCGCTTCTTCATCTGCTCTCCTTTCCAAAGGGAGGAGACCTTCCGGTGGCAGATATAGCACTGCGGCTGCTGTTGAAGACCCGATTACTCCATCTGTGAAAGTAAATTACACCCAGCTATTAATCAACGGACAGTTTGTCGACTCGGTGTCAGGAAAAACTTTTCCTACGCTGGACCCAAGGACTGGGGAAGTGATTGCGCAAGTGGCTGAAGGTGACGCCAGAGATATTGATCTTGCAGTTTCCGCTGCACGCAACGCATTTGATGAAGGGCCTTGGCCTAGGATGACTGCTTATGAAAGATCGAAGATACTTCTGCGATTTGCTGATTTGGTTGAAAAGCATGCTGATGAAGTTGCTGCCCTGGAGACTTGGGACAACGGGAAGACCTTCGAACAGTCGGTCAAACTGGAAGTCCCAATGTTTGTACGCCTGTTTCGATACTACGGTGGATGGGCCGATAAGATTCATGGACTCACTGTTCCAGCCGATGGCTCATATCATGTGCAGACCTTGCACGAACCAATTGGCGTTGCGGGTCAGATAATTCCATGGAACTTTCCTCTGCTCATGTTTGCCTGGAAGGTTGGTCCAGCACTAGCATGTGGCAATACTATTGTTCTCAAGACAGCCGAGCAGACACCTTTGTCTGGTCTCTTTGTGGCTAAGCTATTGCACGAGGCTGGACTTCCTGAGGGCGTTCTCAACATCGTTTCTGGTTATGGGCCCACCGCTGGTGCTGCTCTTGCCAGCCATATGGAAGTTGATAAGCTTGCTTTTACTGGATCGACGGAAACAGGGAAGATTGTACTTGAACTAGCTTCAAAGAGCAATCTGAAGCCAGTAACGTTGGAGCTTGGCGGAAAATCCCCTTTCATTGTATGTGAGGATGCTGATGTGGATAAGGCTGTCGAGATGGCACACTTTGCTCTCTTCTTCAACCAGGGACAATGCTGCTGTGCTGGTTCTCGTACTTTTGTTCATGAAAAAGTATATGATGAGTTTCTAGAAAAAGCTAGGAAACGAGCTGCAAACCGTGTTGTTGGTGATCCATTCCTGGGTGGAATTGAGCAAGGTCCTCAGGTCGATGGCGAACAATTCAAAAAGATTTTGAGATATATAAAATATGGGATTGAAGGTGGAGCCACTCTTGAAGCTGGAGGAGAGAGGTTTGGTTCCAAGGGTTACTATATCCAACCAACAGTTTTCTCAGACGTTAAGGATGACATGAAAATTGCACAGGAGGAGATTTTTGGTCCTGTACAGACAATCTTGAAATTCAAAGAGCTTGAGGAGGTGATAAGGAGAGCAAATGCTAGTCGCTATGGGCTGGCCGCTGGGATCTTTACTCACAATATCGACACAGCCAACAGGCTTACACGTGCGCTGAGAGTTGGGTCTGTGTGGATCAATTGCTTTGACATATTTGATGCCGCAATTCCTTTTGGTGGGTACAAGATGAGCGGACATGGACGAGAAAAGGGCATCTACAGCCTCAGCAATTACCTGCAAGTGAAGGCTGTTGTCACTCCTTTGAACAACCCTGCTTGGCTTTAG 1596 47.68 MAARRISSLLSRSLASSSALLSKGRRPSGGRYSTAAAVEDPITPSVKVNYTQLLINGQFVDSVSGKTFPTLDPRTGEVIAQVAEGDARDIDLAVSAARNAFDEGPWPRMTAYERSKILLRFADLVEKHADEVAALETWDNGKTFEQSVKLEVPMFVRLFRYYGGWADKIHGLTVPADGSYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSGLFVAKLLHEAGLPEGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTETGKIVLELASKSNLKPVTLELGGKSPFIVCEDADVDKAVEMAHFALFFNQGQCCCAGSRTFVHEKVYDEFLEKARKRAANRVVGDPFLGGIEQGPQVDGEQFKKILRYIKYGIEGGATLEAGGERFGSKGYYIQPTVFSDVKDDMKIAQEEIFGPVQTILKFKELEEVIRRANASRYGLAAGIFTHNIDTANRLTRALRVGSVWINCFDIFDAAIPFGGYKMSGHGREKGIYSLSNYLQVKAVVTPLNNPAWL 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 44312 51615 + MC08g0005 Mch8g0005 693626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0005 531 SUPERFAMILY ALDH-like 47 526 IPR016161 GO:0016491(InterPro)
Mch8g0005 531 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 47 523 - GO:0004029(PANTHER)
Mch8g0005 531 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 301 490 IPR016163 GO:0016620(InterPro)
Mch8g0005 531 CDD ALDH_F2BC 48 523 - -
Mch8g0005 531 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491(InterPro)
Mch8g0005 531 FunFam Mitochondrial aldehyde dehydrogenase 2 303 492 - -
Mch8g0005 531 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 55 519 IPR016162 GO:0016491(InterPro)
Mch8g0005 531 Pfam Aldehyde dehydrogenase family 59 521 IPR015590 GO:0016491(InterPro)
Mch8g0005 531 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491(InterPro)
Mch8g0005 531 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 55 328 - -
Mch8g0005 531 FunFam Aldehyde dehydrogenase, putative 493 519 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1365 Mch-Chr1:15591048 Mch8g0005 Mch-Chr8:44312 3.14E-44 transposed
Mch2g0759 Mch-Chr2:5207277 Mch8g0005 Mch-Chr8:44312 1.56E-104 transposed
Mch4g0868 Mch-Chr4:6230668 Mch8g0005 Mch-Chr8:44312 1.06E-55 transposed
Mch6g0791 Mch-Chr6:5504644 Mch8g0005 Mch-Chr8:44312 1.44E-206 transposed
Mch7g1231 Mch-Chr7:15892344 Mch8g0005 Mch-Chr8:44312 2.78E-66 transposed
Mch6g0160 Mch-Chr6:1068521 Mch8g0005 Mch-Chr8:44312 2.19e-316 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0005 K00128 - csv:101202756 972.23