Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0038 TTCAAATACTCTACCCTTGAAAAGGCAACAGGGTCCTTCGCTGAGGCTAACAAGCTTGGACAGGGAGGATTTGGCACAGTTTATAAGGCAATTCTGTCGGACGGAAGAGAGATAGCTGTGAAGAGGCTTTTCTTCAATAACAAACATAGAGCAGCAGACTTCTACAATGAAGTGAACATAATTAGCAGTGTGGAGCACAAAAATTTAGTAAGGTTGCTTGGTTGTAGTTGCTCTGGGCCTGAAAGTCTGCTCGTCTATGAGTTCCTTCCCAACAAGAGTCTCGACCGCTTCATTTTTGATCGTGAAAAGGGTAAATCACTGAATTGGGAGAAGAGATTTGATATAATCGTGGGAACAGTTGAAGGCCTGGCTTACCTGCATGAAAACTCGAAAACCAAGATCATTCACAGAGACATCAAGGCTAGTAACATCCTGCTAGATTCCAAACTACGAGCTAAAATTGCTGATTTTGGATTGGCTAGATCCTTCGAAGAGGATGAGAGTCACATCAGCACTGCCATTGCCGGGACCTTGGGATACATGGCGCCAGAGTACTTGGCTCACGGCCAGCTAACAGACAAGGCGGATGTGTACAGTTTTGGAGTTGTTTTACTGGAGACCATCACAGGGATGCAAAACAGTAGGAGCAAAACCTCGGACTACTTGGAAAGCATAGTGATAATTGCATGGAAGCATTTTCAATGTGGAACATTGGAGAGGATATACGATCCGAACCTTGTGGCGGAGGTGGAGGAAGACGGTAGCGTAGTAAAAGTGAAAGAGGAGATAGGGAGAGTGGTGCAGATAGGGCTTCTGTGCACACAGGAGATTGCATCTCTGCGGCCCACCATGCGTAGGGTACTGCAGATGCTGACGAGGAAGGAAGAGCAACTTCCAGCGCCCACCAATCCGCCCTTCATGGACGAGAGGACAATGGAACTCAACGACACCACCGACGGCGACGACCCATCATACCTCAACGTCACGGAAGCTTCTTCCTCAGCTGCCACTCTCACCCACAGTTCATTCCATCCCAGCCTACAAATTACGATACTAATACTACTCTCCGTCTCCCTTTCACAACGGCTAGTATGGAAATTCGTCAAAATTTTCCCAAATCTTAGAATAAATATTCTTATTTATGTCTCTTTTCCTTGTGGAAAAAAACTACCTACCTCTTTTATAAATACAACATACACCTGCTCTGCAAATATAAGCTTACAAAAATGTAATTTTTTTTCTCGCACTCGTATAATCAGCTTAAGGTCATGGGTGATGGAAATCCCGAGTCGTCCAATGTTGAAAAAAAGGAAGAAAGTAATGGCCTTGTCAATTGCGTTAGGTTTTCGTTTCTCCGGTTCTCTTTTTCTAGAACATCCAGAGAATTTTGAGAAGAGAGAGAGCTCCAGCACCGCAACCCCAGATTCAATGGGGATCCACCTTGTTTATGCTTCCAAATATGTTCTATTCTCAGCTCTCGCTATTCTTCTCATGCTCGCAACTTCGACTATGGGAAAGCCAAGAGATCAAACTGTCAGAGTGATTTGCGGGAAGGAACTCGAGCACAATACCACAGCCTACGTCCCAAATTTTTTTGGGTCCATGGAAAAAGTACGACAGCAAATCGGAACTTCGGGATTTGGGACGGCTGGTACGGGAACAGGACCTGATGCCAGCTATGGGCTCGCCCAATGCCATGAAGATCTCTCGTCCCACGAATGTGTGCTGTGTCATTCTCAAGCACGCACAGTGCTTCCTCAATGCTTCCCTTTCAACGGCGGCCGAGCATTCATCGATGGCTGCTTCCTGAGGTTTGAAAACTATACCTTTTTTGACGAGTATAAAGGCCCCGAAGATGCTGCAGTTTGCGGGAACTTGACCCAAAAGGACCCCAGGTATGACCAAGCGGCCAGGGAGGCGGTGATGCAAGTGGTCAGCACTGCACCGGGCAAACGAGGCTTTGCAAAAGCTCGAGTGGCTGTGGCTGTGGCCGGGATGGCAAACGAGTCCATGTCCACGGCTTATGCGCTGGGTCAGTGCTGGAGAAGTTTAAACAGCAGCTCTTGCACCGTATGCTTGCAAAATGCTTCTGCTTCAATGTTACGATGTTTACCTCGCTCGGAAGGGCGAGCATTAAACACAGGCTGCTTCATGAGATACTCGAACACAGACTTCCTCAATAAGGACATCAAAAATAGTTCCAGGGGTGGAACTCGAACCTTATTGATTGTTTCAATCTTGAGTTCTGTTGTCGTTTTGATAATCGGAGTGGCGATTGGTGCTTTTATCTGGAAGCATAGATACGTACAAAAGAAAAGAAAAGGAGGTTCAACTGATGTGAAGAAGTTGGCAAAAACTCTTCAAGATAGTAACTTGAACTTCAAGTACTCAACCCTTGAAAAAGCTACCAACAATTTCAGCCTTGATAACAAGATTGGACAAGGGGGGTTTGGCACTGTTTATAAGGGAGCTCTACCTGACGGAAGAGAGATTGCTGTCAAGAGATTCTTCTTCAATAACAGGCATCGAGCAGCAGATTTCTACAATGAAGTAAACATGATCAGCAGTGTCGAACATAAAAATCTGGTGAGGTTGCTAGGATGCAGTTGTTCTGGACCTGAAAGCCTACTTGTTTACGAATTCCTACCTAACAAGAGTCTCGATCGCTTCATCTTCGATACCAGTAACAGTAAAGCTCTTGATTGGGATAAGAGATATAACATCATCATCGGAACAGTTGAAGGTTTAATATATCTACATGAAAATCCAAAGATCAAGATCATACACAGAGATATAAAGGCCAGTAATATCTTGCTCGATCTAAAGCTCCAAGCAAAAATAGCAGATTTTGGACTAGCAAGGTCTTTCCAAGAAAACAAGAGTCATATTAGCACCGCCATTGCAGGAACCCTAGGATATATGGCTCCAGAGTATCTAGCTTATGGTCAATTAACCGAAAAGGCTGATGTCTATAGTTTCGGCGTGCTTTTGTTAGAAATTGTTGCTGGGGTTCAATATAATGGCATTCAAGTCTCAGGAAAC 3042 44.9 FKYSTLEKATGSFAEANKLGQGGFGTVYKAILSDGREIAVKRLFFNNKHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDRFIFDREKGKSLNWEKRFDIIVGTVEGLAYLHENSKTKIIHRDIKASNILLDSKLRAKIADFGLARSFEEDESHISTAIAGTLGYMAPEYLAHGQLTDKADVYSFGVVLLETITGMQNSRSKTSDYLESIVIIAWKHFQCGTLERIYDPNLVAEVEEDGSVVKVKEEIGRVVQIGLLCTQEIASLRPTMRRVLQMLTRKEEQLPAPTNPPFMDERTMELNDTTDGDDPSYLNVTEASSSAATLTHSSFHPSLQITILILLSVSLSQRLVWKFVKIFPNLRINILIYVSFPCGKKLPTSFINTTYTCSANISLQKCNFFSRTRIISLRSWVMEIPSRPMLKKRKKVMALSIALGFRFSGSLFLEHPENFEKRESSSTATPDSMGIHLVYASKYVLFSALAILLMLATSTMGKPRDQTVRVICGKELEHNTTAYVPNFFGSMEKVRQQIGTSGFGTAGTGTGPDASYGLAQCHEDLSSHECVLCHSQARTVLPQCFPFNGGRAFIDGCFLRFENYTFFDEYKGPEDAAVCGNLTQKDPRYDQAAREAVMQVVSTAPGKRGFAKARVAVAVAGMANESMSTAYALGQCWRSLNSSSCTVCLQNASASMLRCLPRSEGRALNTGCFMRYSNTDFLNKDIKNSSRGGTRTLLIVSILSSVVVLIIGVAIGAFIWKHRYVQKKRKGGSTDVKKLAKTLQDSNLNFKYSTLEKATNNFSLDNKIGQGGFGTVYKGALPDGREIAVKRFFFNNRHRAADFYNEVNMISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDRFIFDTSNSKALDWDKRYNIIIGTVEGLIYLHENPKIKIIHRDIKASNILLDLKLQAKIADFGLARSFQENKSHISTAIAGTLGYMAPEYLAYGQLTEKADVYSFGVLLLEIVAGVQYNGIQVSGN 1014
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 233794 238853 - MC08g0035 Mch8g0038 693659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0038 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 927 939 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g0038 1014 ProSiteProfiles Protein kinase domain profile. 806 1014 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0038 1014 SMART serkin_6 806 1014 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0038 1014 SMART serkin_6 13 307 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0038 1014 Gene3D Transferase(Phosphotransferase) domain 1 882 1010 - -
Mch8g0038 1014 Gene3D Transferase(Phosphotransferase) domain 1 89 300 - -
Mch8g0038 1014 SUPERFAMILY Protein kinase-like (PK-like) 789 1005 IPR011009 -
Mch8g0038 1014 FunFam Cysteine-rich receptor-like protein kinase 2 509 610 - -
Mch8g0038 1014 ProSiteProfiles Gnk2-homologous domain profile. 509 610 IPR002902 -
Mch8g0038 1014 FunFam Cysteine-rich receptor-like protein kinase 3 619 725 - -
Mch8g0038 1014 Pfam Salt stress response/antifungal 523 608 IPR002902 -
Mch8g0038 1014 Pfam Salt stress response/antifungal 628 722 IPR002902 -
Mch8g0038 1014 MobiDBLite consensus disorder prediction 298 323 - -
Mch8g0038 1014 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 319 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Mch8g0038 1014 FunFam cysteine-rich receptor-like protein kinase 10 882 1014 - -
Mch8g0038 1014 Pfam Protein kinase domain 15 219 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0038 1014 Pfam Protein kinase domain 807 1004 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0038 1014 CDD STKc_IRAK 19 293 - -
Mch8g0038 1014 FunFam Cysteine-rich receptor-like protein kinase 2 89 299 - -
Mch8g0038 1014 SUPERFAMILY Protein kinase-like (PK-like) 2 312 IPR011009 -
Mch8g0038 1014 Gene3D Phosphorylase Kinase; domain 1 1 88 - -
Mch8g0038 1014 Gene3D Phosphorylase Kinase; domain 1 766 881 - -
Mch8g0038 1014 Gene3D - 621 725 IPR038408 -
Mch8g0038 1014 Gene3D - 509 610 IPR038408 -
Mch8g0038 1014 ProSiteProfiles Protein kinase domain profile. 13 307 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0038 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g0038 1014 FunFam Putative DUF26-domain receptor-like protein kinase family protein 776 881 - -
Mch8g0038 1014 FunFam Putative DUF26-domain receptor-like protein kinase family protein 1 88 - -
Mch8g0038 1014 ProSitePatterns Protein kinases ATP-binding region signature. 812 834 IPR017441 GO:0005524(InterPro)
Mch8g0038 1014 ProSiteProfiles Gnk2-homologous domain profile. 615 725 IPR002902 -
Mch8g0038 1014 ProSitePatterns Protein kinases ATP-binding region signature. 19 41 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1208 Mch-Chr3:15262262 Mch8g0038 Mch-Chr8:233794 6.21E-131 dispersed
Mch8g0038 Mch-Chr8:233794 Mch9g2261 Mch-Chr9:22937256 7.44E-135 dispersed
Mch8g0038 Mch-Chr8:233794 Mch3g1207 Mch-Chr3:15244862 3.75E-139 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77565 PF00069 Pkinase 8.60E-47 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0038 - - - 0.0