Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g0056 | ATGTCAAAACCCTGGGGCGGAATCGGAGCCTGGGCCGCCGATGCGGAGCGTGCCGAAGCTGAGGAGCGAGAGGCGCAAGCTGCTGCGGCCGCCTCCCAAGCAGAATCCAAGAATTTCCCCAGCCTTAGGGAAGCTGCCAACACCAAGCCCAAGAAGAAGAAGATGACGCTCTCGGAATTCAATATGGGGACCTTTGCGGCTCCTGGCGCCGGCAGCAGGCATACTGAGCACCAGGGCTTGACGCCGGAGGAGATGATTCGCCTACCCACTGGTCCAAAAGACCGCTCTGCTGAGGAGATGCAGTATGGGCGGCTCGGTGGGGGATTTCCCACTTATGGTCGCTCCAGTCTGCCTCCTGGTCGATCTCGAGACCGTGATGAAGGCGATGGCTCTTGGGGTGGTGGTCGACGATCGTATGGTGGGTTCGATGAGGAGCGCAGGGGTCCATCTCCTAGGGTTTCCAATTTCGATCAACCATCGAGGGCTGACGAGGTGGATAATTGGGCAATGACGAAGAAATCTCCTACATTGGATTCAGGTCGACAAAATAGGTATGGGTCGCTCGGAGGTGGCATGGGTGGAGTTTCATCTAGGGCCGACGAGGTAGATAGCTGGGCGAGTGGAAAAAAACCTATTCCATCGAGATCCTCCACATTTGGTTCTGGTTATCGTGAGGCGAATGAGCCTGATCGCTGGACTAGAGGCCGTTCACGTGATGGTGACACAGAACGGCCCCGATTAGTATTGGATCCACCGAAAGGTGATGTTGGTACAAATGAAGCAATAAGGACGAACAAGCCAAATCCTTTTGGAGCAGCAAGGCCAAGAGAGGAGGTTTTGGCTGACAAGGGGTTGGATTGGAAGAAGCTGGACACAGAAATTGAGGCCAAAAGGACGAGTAGGCCAACGAGTGCTCACTCTAGCAGGCCTTCGAGTGCTCAATCAAGCCATTCGGAGGGTCCAGGATTGCAGGGGATCGAAAATGTGGTGAAGCAGAGGCCAAAAGTCAATCCATTTGGGAATGCCAAACCTAGGGAAGTTTTGCTGGAGGAACGAGGCAAGGACTGGCGAAAGATAGATCTTCAACTTGAGCATCGTGCTGTTGACAGGCCTGAAGCTGAAGAGGAAAAGATATTGAAAGAGGAAATTGATATTCTAAGAAAGGAACTTGAGGAAGGCTTATCTCTCAATACTAACAAAGAATCGGAGCAAGAATCTGCTGGGGACGTACAAAATCTGCGTGACAGAATAAAAAAGAAAGAACACGAACTGGAGATGTTGATCCTTGATTTGGATGATAAAGTTCGATTTGGGAAGAAAGCTACTGAGAGACCTGGCTCTGGGGCAGGTAGGGCTGCTGTCTTTCCAGAGAGACCACCCTCTCAAGGATCCTTTGATGAGTCCAGAAGCTTTGAGTCTATGGACAGGCCTCGATCACGTGGCACTGCAGATGTATGGAGTAGACCTGCTGATGATAAAAAACCATTCCAAGGTGCCAGAGATAGAGGATTTTTGGGCAACAGAGACATGGAGAGGTTAGAATTTGTTTGTCATTTTGCTCTTCTCTTTGTTGATACTTGA | 1581 | 51.11 | MSKPWGGIGAWAADAERAEAEEREAQAAAAASQAESKNFPSLREAANTKPKKKKMTLSEFNMGTFAAPGAGSRHTEHQGLTPEEMIRLPTGPKDRSAEEMQYGRLGGGFPTYGRSSLPPGRSRDRDEGDGSWGGGRRSYGGFDEERRGPSPRVSNFDQPSRADEVDNWAMTKKSPTLDSGRQNRYGSLGGGMGGVSSRADEVDSWASGKKPIPSRSSTFGSGYREANEPDRWTRGRSRDGDTERPRLVLDPPKGDVGTNEAIRTNKPNPFGAARPREEVLADKGLDWKKLDTEIEAKRTSRPTSAHSSRPSSAQSSHSEGPGLQGIENVVKQRPKVNPFGNAKPREVLLEERGKDWRKIDLQLEHRAVDRPEAEEEKILKEEIDILRKELEEGLSLNTNKESEQESAGDVQNLRDRIKKKEHELEMLILDLDDKVRFGKKATERPGSGAGRAAVFPERPPSQGSFDESRSFESMDRPRSRGTADVWSRPADDKKPFQGARDRGFLGNRDMERLEFVCHFALLFVDT | 526 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 326399 | 330977 | - | MC08g0050 | Mch8g0056 | 693677 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g0056 | 526 | MobiDBLite | consensus disorder prediction | 303 | 322 | - | - | |
Mch8g0056 | 526 | MobiDBLite | consensus disorder prediction | 227 | 250 | - | - | |
Mch8g0056 | 526 | MobiDBLite | consensus disorder prediction | 469 | 502 | - | - | |
Mch8g0056 | 526 | MobiDBLite | consensus disorder prediction | 276 | 302 | - | - | |
Mch8g0056 | 526 | Pfam | Plant specific eukaryotic initiation factor 4B | 1 | 503 | IPR010433 | GO:0003743(InterPro) | |
Mch8g0056 | 526 | Coils | Coil | 410 | 430 | - | - | |
Mch8g0056 | 526 | Coils | Coil | 15 | 37 | - | - | |
Mch8g0056 | 526 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B | 1 | 441 | IPR010433 | GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER) | |
Mch8g0056 | 526 | MobiDBLite | consensus disorder prediction | 1 | 344 | - | - | |
Mch8g0056 | 526 | MobiDBLite | consensus disorder prediction | 440 | 502 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g1018 | Mch-Chr2:6881534 | Mch8g0056 | Mch-Chr8:326399 | 3.69E-30 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch8g0056 | K03258 | - | csv:101206526 | 808.52 |