Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0056 ATGTCAAAACCCTGGGGCGGAATCGGAGCCTGGGCCGCCGATGCGGAGCGTGCCGAAGCTGAGGAGCGAGAGGCGCAAGCTGCTGCGGCCGCCTCCCAAGCAGAATCCAAGAATTTCCCCAGCCTTAGGGAAGCTGCCAACACCAAGCCCAAGAAGAAGAAGATGACGCTCTCGGAATTCAATATGGGGACCTTTGCGGCTCCTGGCGCCGGCAGCAGGCATACTGAGCACCAGGGCTTGACGCCGGAGGAGATGATTCGCCTACCCACTGGTCCAAAAGACCGCTCTGCTGAGGAGATGCAGTATGGGCGGCTCGGTGGGGGATTTCCCACTTATGGTCGCTCCAGTCTGCCTCCTGGTCGATCTCGAGACCGTGATGAAGGCGATGGCTCTTGGGGTGGTGGTCGACGATCGTATGGTGGGTTCGATGAGGAGCGCAGGGGTCCATCTCCTAGGGTTTCCAATTTCGATCAACCATCGAGGGCTGACGAGGTGGATAATTGGGCAATGACGAAGAAATCTCCTACATTGGATTCAGGTCGACAAAATAGGTATGGGTCGCTCGGAGGTGGCATGGGTGGAGTTTCATCTAGGGCCGACGAGGTAGATAGCTGGGCGAGTGGAAAAAAACCTATTCCATCGAGATCCTCCACATTTGGTTCTGGTTATCGTGAGGCGAATGAGCCTGATCGCTGGACTAGAGGCCGTTCACGTGATGGTGACACAGAACGGCCCCGATTAGTATTGGATCCACCGAAAGGTGATGTTGGTACAAATGAAGCAATAAGGACGAACAAGCCAAATCCTTTTGGAGCAGCAAGGCCAAGAGAGGAGGTTTTGGCTGACAAGGGGTTGGATTGGAAGAAGCTGGACACAGAAATTGAGGCCAAAAGGACGAGTAGGCCAACGAGTGCTCACTCTAGCAGGCCTTCGAGTGCTCAATCAAGCCATTCGGAGGGTCCAGGATTGCAGGGGATCGAAAATGTGGTGAAGCAGAGGCCAAAAGTCAATCCATTTGGGAATGCCAAACCTAGGGAAGTTTTGCTGGAGGAACGAGGCAAGGACTGGCGAAAGATAGATCTTCAACTTGAGCATCGTGCTGTTGACAGGCCTGAAGCTGAAGAGGAAAAGATATTGAAAGAGGAAATTGATATTCTAAGAAAGGAACTTGAGGAAGGCTTATCTCTCAATACTAACAAAGAATCGGAGCAAGAATCTGCTGGGGACGTACAAAATCTGCGTGACAGAATAAAAAAGAAAGAACACGAACTGGAGATGTTGATCCTTGATTTGGATGATAAAGTTCGATTTGGGAAGAAAGCTACTGAGAGACCTGGCTCTGGGGCAGGTAGGGCTGCTGTCTTTCCAGAGAGACCACCCTCTCAAGGATCCTTTGATGAGTCCAGAAGCTTTGAGTCTATGGACAGGCCTCGATCACGTGGCACTGCAGATGTATGGAGTAGACCTGCTGATGATAAAAAACCATTCCAAGGTGCCAGAGATAGAGGATTTTTGGGCAACAGAGACATGGAGAGGTTAGAATTTGTTTGTCATTTTGCTCTTCTCTTTGTTGATACTTGA 1581 51.11 MSKPWGGIGAWAADAERAEAEEREAQAAAAASQAESKNFPSLREAANTKPKKKKMTLSEFNMGTFAAPGAGSRHTEHQGLTPEEMIRLPTGPKDRSAEEMQYGRLGGGFPTYGRSSLPPGRSRDRDEGDGSWGGGRRSYGGFDEERRGPSPRVSNFDQPSRADEVDNWAMTKKSPTLDSGRQNRYGSLGGGMGGVSSRADEVDSWASGKKPIPSRSSTFGSGYREANEPDRWTRGRSRDGDTERPRLVLDPPKGDVGTNEAIRTNKPNPFGAARPREEVLADKGLDWKKLDTEIEAKRTSRPTSAHSSRPSSAQSSHSEGPGLQGIENVVKQRPKVNPFGNAKPREVLLEERGKDWRKIDLQLEHRAVDRPEAEEEKILKEEIDILRKELEEGLSLNTNKESEQESAGDVQNLRDRIKKKEHELEMLILDLDDKVRFGKKATERPGSGAGRAAVFPERPPSQGSFDESRSFESMDRPRSRGTADVWSRPADDKKPFQGARDRGFLGNRDMERLEFVCHFALLFVDT 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 326399 330977 - MC08g0050 Mch8g0056 693677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0056 526 MobiDBLite consensus disorder prediction 303 322 - -
Mch8g0056 526 MobiDBLite consensus disorder prediction 227 250 - -
Mch8g0056 526 MobiDBLite consensus disorder prediction 469 502 - -
Mch8g0056 526 MobiDBLite consensus disorder prediction 276 302 - -
Mch8g0056 526 Pfam Plant specific eukaryotic initiation factor 4B 1 503 IPR010433 GO:0003743(InterPro)
Mch8g0056 526 Coils Coil 410 430 - -
Mch8g0056 526 Coils Coil 15 37 - -
Mch8g0056 526 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 441 IPR010433 GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)
Mch8g0056 526 MobiDBLite consensus disorder prediction 1 344 - -
Mch8g0056 526 MobiDBLite consensus disorder prediction 440 502 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1018 Mch-Chr2:6881534 Mch8g0056 Mch-Chr8:326399 3.69E-30 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0056 K03258 - csv:101206526 808.52