Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0075 ATGGAAAATGGTTTCTCTTCTCCTAGATGCGATGCGTTTCCTGTTGGGCTTCGTGTTCTTGTCGTTGATGATGACCCAACGTGGCTGAAAATCCTGGAAAAGATGCTCAAGAAGTGCTCTTATGAAGTGACAACATGTTGTTTGGCAAGGGAGGCTCTGAACTTGCTTAGGGAGAGAAAAGATGGATATGATATTGTAATCAGCGATGTAAACATGCCCGATATGGATGGTTTTAAACTTCTCGAGCATGTTGGACTCGAAATGGACCTGCCAGTTATCATGATGTCAGTCGACGGAGAAACAAGCAGAGTAATGAAAGGGGTTCAGCATGGGGCTTGTGATTATCTTCTAAAGCCGATACGAATGAAAGAACTTAGGAATATATGGCAGCACGTACTCCGAAAGAAGATACAAGAGGGGAGAGACATTGAAGGCCATGATATTATTGAAGGCATCCATATCCTAAGAAATGGGTCAGACAGATATGATGATAGCCAGTTTCTAAGAGGAGAGGAACTATTTTCAGTGAGGAAAAGAAAAGATGTTGATAAACATGATGACAAAGACTTTGGAGATACTTCTACAAAGAAAGCAAGAGTTGTTTGGTCAGTTGATCTGCATCAAAAATTTGTAAAAGCAGTAAACCAGATAGGTTTTGACAAAGTAGGCCCTAAAAAGATTCTTGATCTGATGAATGTCCCATGGCTGACTAGGGAGAATGTAGCTAGCCACTTGCAGAAATATCGCCTCTATTTGAGTCGGCTGCAGAAAGAAAATGATCCTAAAGCTTGTTTTGTTGTTGGGATGAAACATACTGATTCAAGTTCGAAGGATGGAGATGGCAACTTTGGCCTTCGTAGCTCGTTAGTCGTGCAACAAAATGATGTTACAAATAGCAGCTTCAGTTTTTCAGGTGATAACTTTCTTCTTCAAAATGTAGACTCCATAGGCTGTGAAGTTGATAGGAAAAGGATTGTTCAAGAGCACACATCAGAGCCAAAAAGACCTGCTGCTAGGAGTGTTCCTGAACCAATCAAGACGCGAAGTACGCAGATGAAATTTAATAACTCTTTTGAATCTGAGGGAAAATTTGCAGCATTTGATCCAAACAACCGAACATGTTACCCTTGGGTCGAAGCTCCAGAAATACAGTTCAAACAAGAAAGTAAGCCACTCGTGCATTTAGAAAGAGATTTCAGCCAGTTTCCTCCCAAGGTTTCGCCACATCAAGTTCAAATCGACCAACTACAGTCGATTTCATCCATTAGTTCTGGGCGGTCAGCAACAGAGAAAGATATAGCAAGCTCCATTGAAAGTAAGCCTCCATATTCTGAGGACTGTAGCCAGCAGATTATCCATATAAATCTACCAAAAACTTCAACTGATTCATTTTCAGGCAAGTCTAAGAGTTTTAATGGGATGAATGACCAATTTAAGCCCATTTCAACTACTACCACTCCATTGGGAATGACAGACCAGAATTTCAATCTTAGCTGCAATTCTGATTTGGGAAGTGGGTTACCTAAAACAACCTTTGATGAAGACTTGCAAATTTATTTGCTTCAAGATGTTTGTTATCCAAAGAATCTTGAAGATCAGATTATAGAGTTTCCAGATTACGGCGATCCTGGTATCTTCACTGATGTTCCGCCTCACCTTTACGATGCATTAAGGTACGGGTATGAGTATTCCTATGACCCAACTGAATATCCAGTGATAGATGAAGGCCTATTCATCGCA 1740 40.63 MENGFSSPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLAREALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVLRKKIQEGRDIEGHDIIEGIHILRNGSDRYDDSQFLRGEELFSVRKRKDVDKHDDKDFGDTSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLQKENDPKACFVVGMKHTDSSSKDGDGNFGLRSSLVVQQNDVTNSSFSFSGDNFLLQNVDSIGCEVDRKRIVQEHTSEPKRPAARSVPEPIKTRSTQMKFNNSFESEGKFAAFDPNNRTCYPWVEAPEIQFKQESKPLVHLERDFSQFPPKVSPHQVQIDQLQSISSISSGRSATEKDIASSIESKPPYSEDCSQQIIHINLPKTSTDSFSGKSKSFNGMNDQFKPISTTTTPLGMTDQNFNLSCNSDLGSGLPKTTFDEDLQIYLLQDVCYPKNLEDQIIEFPDYGDPGIFTDVPPHLYDALRYGYEYSYDPTEYPVIDEGLFIA 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 417170 420143 + MC08g0068 Mch8g0075 693696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0075 580 Pfam Response regulator receiver domain 19 128 IPR001789 GO:0000160(InterPro)
Mch8g0075 580 Gene3D - 193 256 - -
Mch8g0075 580 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 328 IPR045279 GO:0009736(InterPro)
Mch8g0075 580 PIRSF RR_ARR_type-B 1 522 IPR017053 GO:0003677(InterPro)|GO:0003700(InterPro)|GO:0009736(InterPro)
Mch8g0075 580 SMART REC_2 17 129 IPR001789 GO:0000160(InterPro)
Mch8g0075 580 Pfam Myb-like DNA-binding domain 199 249 IPR001005 -
Mch8g0075 580 FunFam Two-component response regulator 193 256 - -
Mch8g0075 580 MobiDBLite consensus disorder prediction 422 445 - -
Mch8g0075 580 NCBIfam myb-like DNA-binding domain, SHAQKYF class 197 250 IPR006447 GO:0003677(InterPro)
Mch8g0075 580 SUPERFAMILY Homeodomain-like 195 254 IPR009057 -
Mch8g0075 580 FunFam Two-component response regulator 17 172 - -
Mch8g0075 580 ProSiteProfiles Response regulatory domain profile. 18 133 IPR001789 GO:0000160(InterPro)
Mch8g0075 580 CDD REC_typeB_ARR-like 19 133 - -
Mch8g0075 580 SUPERFAMILY CheY-like 16 140 IPR011006 -
Mch8g0075 580 Gene3D - 17 160 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g1811 Mch-Chr6:20717752 Mch8g0075 Mch-Chr8:417170 2.91E-21 dispersed
Mch7g1214 Mch-Chr7:15730654 Mch8g0075 Mch-Chr8:417170 4.63E-85 dispersed
Mch8g0075 Mch-Chr8:417170 Mch8g3032 Mch-Chr8:32922850 1.41E-68 dispersed
Mch8g0075 Mch-Chr8:417170 Mch5g0747 Mch-Chr5:5033128 3.88E-90 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43750 PF00072 Response_reg 7.80E-25 CL0304 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0075 K14491 - csv:101204370 965.681