Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0086 ATGTACTTGCCTGATAAGCCTCGCCCAATCGATATTTACAAGGAAGAAGGTAGCAGAGATATGATGATCGAGGTCGCCTCTAATGGCGACCACCATCTTCCTCCTCACCAGCATCAGCAGCAGCAGCAGCAGCAGCAGACTCATCCGCAGCACCAACTTATGCTCGGCGATAGCAGTGGGGAGGATCACGAAGTCAAGGCTCCGAAGAAACGGGCGGAGACTTGGGTTCAGGACGAGACTCGGAGCTTAATTTCCCTACGCCGGGAGATGGATGGCTTGTTCAATACCTCCAAATCCAACAAGCATTTGTGGGAGCAGATATCCTCCAAGATGAGGGAAAGGGGCTTCGATCGCTCCCCGACTATGTGTACTGATAAGTGGAGGAACTTGCTCAAGGAGTTCAAGAAGGCAAAGCACCATGACAGGGGAAGTGGCTCTGCCAAGATGTCGTATTACAAGGAGATTGAAGAAATCTTGAAGGAGAGAAGCAAGAGTGCGCATTACAAGAGCCCCACACCACCCAAGATTGATTCATATATGCAATTCTCAGACAAAGGAATTGAGGATAATGGTCTATCGTTCGGACCTGTTGAAGCTGGTGGCAGACCATCGCTCAATCTTGAAAGACAGTTAGATCACGATGGACATCCCCTTGCCATCACAGCTGCTGATGCAGTTGCTGCGACGGGTATTCCACCATGGAATTGGAGAGAGGCACCTGGAAATGGTGGTGAGAGTCAGGCATTTGGCGGGAGAGTTATATCAGTCAAGTGGGGGGATTACACAAGAAGAATCGGTATTGATGGCACCTCAGATGCCATCAAGGAGGCAATTAAATCTGCTTTTAGGTTAAGAACTAAACGGGCATTTTGGTTAGAGGATGAGGACCAGGTTGTCAGAAGTCTGGACCGGGACATGCCTTTAGGAAACTACACTCTTCACCTCGATGAAGGGTTGGCTGTTAAAATCTGCCTCTATGATGAATCTGACCACTTACCAGTACATACTGAAGATAAAATTTTTTACGTTGAAGATGATTACCGGGAGTTTTTAGCTCGTCGGGGCTGGACATGCCTACGGGAGTTTGATGGGTATAGAAACATCGATAATATGGATGATCTCCGTCCTGGTGCGATATATCGCGGAGTGAGTTGA 1155 48.31 MYLPDKPRPIDIYKEEGSRDMMIEVASNGDHHLPPHQHQQQQQQQQTHPQHQLMLGDSSGEDHEVKAPKKRAETWVQDETRSLISLRREMDGLFNTSKSNKHLWEQISSKMRERGFDRSPTMCTDKWRNLLKEFKKAKHHDRGSGSAKMSYYKEIEEILKERSKSAHYKSPTPPKIDSYMQFSDKGIEDNGLSFGPVEAGGRPSLNLERQLDHDGHPLAITAADAVAATGIPPWNWREAPGNGGESQAFGGRVISVKWGDYTRRIGIDGTSDAIKEAIKSAFRLRTKRAFWLEDEDQVVRSLDRDMPLGNYTLHLDEGLAVKICLYDESDHLPVHTEDKIFYVEDDYREFLARRGWTCLREFDGYRNIDNMDDLRPGAIYRGVS 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 478504 484197 + MC08g0079 Mch8g0086 693707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0086 384 MobiDBLite consensus disorder prediction 57 72 - -
Mch8g0086 384 MobiDBLite consensus disorder prediction 33 54 - -
Mch8g0086 384 Gene3D - 75 137 - -
Mch8g0086 384 FunFam trihelix transcription factor GT-1 75 137 - -
Mch8g0086 384 ProSiteProfiles Myb-like domain profile. 67 131 IPR001005 -
Mch8g0086 384 SMART sant 71 133 IPR001005 -
Mch8g0086 384 PANTHER FI21293P1 36 376 - -
Mch8g0086 384 Pfam Myb/SANT-like DNA-binding domain 74 158 IPR044822 -
Mch8g0086 384 MobiDBLite consensus disorder prediction 24 72 - -
Mch8g0086 384 CDD GT1 73 138 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43751 PF13837 Myb_DNA-bind_4 3.40E-21 CL0123 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0086 - - - 0.0