Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0123 ATGGACGACGGAGGAGCTGCTCAGCCGGACGACACCGTCATGTCGGAGGCGGCGTCTGTTCCGCCGCAGCAGCACGACCCCGCGGCGCACCAGCACCAGCCGCCGCCGATGGGGATGGAAAATATTCCGGCGACTTTAAGCCACGGAGGGAGATTCATTCAGTACAACATCTTTGGCAACATCTTCGAAGTTACGGCCAAGTACAAGCCTCCCATCATGCCTATTGGCAAAGGCGCTTACGGCATCGTCTGTTCCGCTCTGAACTCCGAGACAAACGAGCACGTTGCGATCAAGAAGATTGCGAATGCGTTCGACAACAAGATCGATGCCAAGAGAACTCTTCGTGAGATCAAGCTTCTCCGGCATATGGATCATGAAAACGTCAGTGTTGCAATTAGGGATATCATACCTCCGCCTCAAAGGGCAACGTTTAATGATGTTTATATAGCATATGAGCTAATGGATACTGACCTTCATCAAATAATTCGTTCAAACCAAGCATTATCAGAGGAGCATTGTCAGTACTTCCTGTACCAGATTCTTCGTGGATTGAAGTACATACATTCAGCAAATGTTTTGCACAGAGATTTGAAGCCCTCCAATCTGCTATTAAATGCCAACTGTGACCTGAAAATATGTGATTTTGGACTTGCTCGTGTTACTTCAGAAACTGACTTTATGACAGAATATGTGGTTACAAGATGGTACCGTGCACCAGAGCTATTACTTAACTCATCTGATTACACAGCAGCTATTGATGTCTGGTCTGTTGGTTGTATTTTTATGGAACTGATGGATCGGAAGCCCTTGTTTCCTGGTCGAGATCATGTGCATCAGTTACGCTTGCTTTTGGAGCTGATTGGCACTCCATCAGAGGCTGATCTTGGTTTCTTGAACGAGAATGCTAAAAGATATATACGGCAACTTCCTATATACCAACGGCAGTCATTCACTGAAAAGTTTCCACATGTCCATCCTGCAGCCATTGATCTGGTGGAGAAGATGCTAACATTCGATCCAGGACGGAGAATTACCGTTGAAGATGCTCTAGCTCATCCTTATTTGACTTCATTGCATGACATTAGTGATGAGCCCGTGTGCATGACGCCCTTCAGCTTTGATTTTGAGCAGCACGCACTTACGGAGGACCAGATGAAAGAGCTGATCTATCGAGAGGCACTTGCATTTAACCCTGAGTATCATCACCAATAA 1212 46.37 MDDGGAAQPDDTVMSEAASVPPQQHDPAAHQHQPPPMGMENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVSVAIRDIIPPPQRATFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLLELIGTPSEADLGFLNENAKRYIRQLPIYQRQSFTEKFPHVHPAAIDLVEKMLTFDPGRRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQHALTEDQMKELIYREALAFNPEYHHQ 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 720477 728751 + MC08g0114 Mch8g0123 693744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0123 403 Pfam Protein kinase domain 74 355 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0123 403 Gene3D Phosphorylase Kinase; domain 1 52 392 - -
Mch8g0123 403 FunFam Mitogen-activated protein kinase 154 382 - -
Mch8g0123 403 SUPERFAMILY Protein kinase-like (PK-like) 74 363 IPR011009 -
Mch8g0123 403 ProSitePatterns Protein kinases ATP-binding region signature. 75 99 IPR017441 GO:0005524(InterPro)
Mch8g0123 403 CDD STKc_TEY_MAPK 62 398 - -
Mch8g0123 403 FunFam Mitogen-activated protein kinase 54 164 - -
Mch8g0123 403 ProSiteProfiles Protein kinase domain profile. 69 355 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0123 403 SMART serkin_6 69 355 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0123 403 MobiDBLite consensus disorder prediction 17 39 - -
Mch8g0123 403 ProSitePatterns MAP kinase signature. 104 208 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0123 403 Gene3D Transferase(Phosphotransferase) domain 1 154 382 - -
Mch8g0123 403 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 62 393 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Mch8g0123 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g0123 Mch-Chr8:720477 Mch9g1264 Mch-Chr9:14505988 5.29E-111 dispersed
Mch10g0774 Mch-Chr10:5386568 Mch8g0123 Mch-Chr8:720477 2.52E-141 transposed
Mch3g0415 Mch-Chr3:7463936 Mch8g0123 Mch-Chr8:720477 6.55E-214 transposed
Mch3g0431 Mch-Chr3:7742664 Mch8g0123 Mch-Chr8:720477 1.09E-193 transposed
Mch3g1400 Mch-Chr3:16515382 Mch8g0123 Mch-Chr8:720477 1.37E-21 transposed
Mch6g1983 Mch-Chr6:22242782 Mch8g0123 Mch-Chr8:720477 6.78E-11 transposed
Mch6g2418 Mch-Chr6:26093958 Mch8g0123 Mch-Chr8:720477 2.22E-201 transposed
Mch7g0643 Mch-Chr7:11080539 Mch8g0123 Mch-Chr8:720477 8.21E-193 transposed
Mch8g0355 Mch-Chr8:2554194 Mch8g0123 Mch-Chr8:720477 7.53E-24 transposed
Mch8g0797 Mch-Chr8:5630872 Mch8g0123 Mch-Chr8:720477 2.11E-137 transposed
Mch9g1973 Mch-Chr9:21102582 Mch8g0123 Mch-Chr8:720477 2.01E-28 transposed
Mch3g1720 Mch-Chr3:18719533 Mch8g0123 Mch-Chr8:720477 7.43E-43 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77567 PF00069 Pkinase 8.70E-71 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0123 K14512 - csv:101204301 775.778