Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0138 ATGTCTTCCGCCGAGAAGGAGAGAGAGACCCAGGTCTACATGGCCAAGCTCGCCGAGCAGGCCGAGCGCTATGACGAAATGGTTGAGTGTATGAAGAATATCGCGAAGCTGGACCTTGAGCTAACTGTAGAGGAGAGGAACCTTCTTTCTGTGGGGTACAAAAATGTGATTGGAGCTCGGCGAGCCTCTTGGCGCATCATGTCTTCGATTGAGCAGAAAGAGGAGTCCAAGGGGAACGAGAACATTGTGAAATTGATAAAGGGCTACCGCCAGAAAGTAGAGGAGGAGCTTTCGAAGATTTGTGGTGATATTCTTTCTATCATAGACAAGCATTTAATCCCTCATTCCACATCTGCAGAAGCCACTGTTTTCTACTACAAGATGAAAGGTGACTACTATCGTTATCTTGCTGAGTTCAAGACAGATCAAGATAGAAAAGAGGCTGCTGATCAGTCGTTGAAGGGATATGAGGCATTTATTTTCTTCATAACATTCAAGTTCACATTAAAGATTACAAACAGCCTTTGCAATTATTTGAGGTGCTCCATGTTTTGCACTGCGAATACCGAACTCCCATCGACCCACCCCATCCGTCTTGGCCTCGCTCTCAACTTTTCTGTCTTCTACTACGAGATTATGAATTCGCCTGAGAGAGCTTGCCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCGGAGTTGGATACCTTGAGTGAGGAATCATACAAGGATAGCACTCTGATCATGCAGCTGTTGAGAGACAACCTCACCCTCTGGACCTCAGATTTGCCTGAAGATGGCGGTGAAGAAAACTTCAAACCTGAGGATTCCAAGCCTGCTGAACCTGAGGCCCAGCAAGCCAAATGA 867 46.14 MSSAEKERETQVYMAKLAEQAERYDEMVECMKNIAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENIVKLIKGYRQKVEEELSKICGDILSIIDKHLIPHSTSAEATVFYYKMKGDYYRYLAEFKTDQDRKEAADQSLKGYEAFIFFITFKFTLKITNSLCNYLRCSMFCTANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEENFKPEDSKPAEPEAQQAK 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 862837 865282 - MC08g0126 Mch8g0138 693759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0138 288 Coils Coil 14 34 - -
Mch8g0138 288 Gene3D - 1 274 IPR036815 -
Mch8g0138 288 SMART 1433_4 8 273 IPR023410 -
Mch8g0138 288 Pfam 14-3-3 protein 14 158 IPR023410 -
Mch8g0138 288 Pfam 14-3-3 protein 186 260 IPR023410 -
Mch8g0138 288 ProSitePatterns 14-3-3 proteins signature 2. 242 261 IPR023409 -
Mch8g0138 288 SUPERFAMILY 14-3-3 protein 7 262 IPR036815 -
Mch8g0138 288 MobiDBLite consensus disorder prediction 266 282 - -
Mch8g0138 288 PIRSF 14-3-3 2 175 IPR000308 -
Mch8g0138 288 PIRSF 14-3-3 166 272 IPR000308 -
Mch8g0138 288 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Mch8g0138 288 MobiDBLite consensus disorder prediction 262 288 - -
Mch8g0138 288 PANTHER 14-3-3 PROTEIN 7 265 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Mch8g0138 288 Coils Coil 220 240 - -
Mch8g0138 288 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Mch8g0138 288 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Mch8g0138 288 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g1654 Mch-Chr6:18343771 Mch8g0138 Mch-Chr8:862837 8.20E-16 dispersed
Mch8g0138 Mch-Chr8:862837 Mch8g0211 Mch-Chr8:1401452 9.39E-127 dispersed
Mch8g1744 Mch-Chr8:16573526 Mch8g0138 Mch-Chr8:862837 1.06E-10 transposed
Mch8g0138 Mch-Chr8:862837 Mch9g2079 Mch-Chr9:21845413 1.41E-163 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0138 K06630 - csv:101221858 493.426