Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0141 ATGCTAGGGGTAAAGAAGAGGGGCCATGGAAATCGTTCTTGGATAAAGATTGATCAGAATGGGGACTCGGAGGTTTTGGAACTTGAGAAGGCTACAATAATGAGGCATTGTTCTTTACCTTCAAGAGATATGCGACTTTTAGATCCTCTCTTCCTTTGTCCGTCCACAATACTAGGAAGGGAGAAGGCAATCGTTGTCAGTCTCGAGCAAATTCGGTGTATAATCACATCTGATGAGGTTATTCTGATGAACTCCTTAGATGGATGTGCTGCACAGTACAAGTCAGAACTATGCAAGCGTCTCCAAGCAAATAAAGATCAATCAGGTAAAGAATTAAAATCCATGTACAATTATTTTGTACATCTATCTGACGATTTGCCCTTTGAATTTAGGGCACTGGAGCTGGCATTGGAACTTACTTGCTCGTTTCTTGACACACAGGTGAGGGAGATGGAAATGGAGATATACCCTCTGTTGGATGATTTAGCATCTTCAATAAACACCCTTAATCTCGAAAGAGTTCGAAGATTTAAAGGCAACCTTCTGACCTTGACTCAACAAGTGCAAAAGGTGCATGACGAAATTGAACATCTGGTGGATGATGATGGGGATATGGCTGAGATGTATCTAACAGAGAAGAAACAAAGGTTGGAGTCTAATATCCGAAGTAACTCGTATCTCGAAACCAATTACTTTGGGAAACAGCTACCGAAATCGGCTCCCATTTCGCCAGTGGGTTCTTCCAATGGAACTCATAAATTACAGAGGGCTTTTAGCAGTATTGTGAACTCAAGCAGCTTGATGAGTTCATCGAACAGCGGAGATAACATCGAACAATTGGAGATGCTGCTCGAAGCATACTTTGTGGTCATAGACGACATGCTCAGTAAATTGCTCTCGCTCAAAGAATCTATAGACGACACTGAAGATCTGATCAACATTAAACTGGGCAACGTTCAGAACCAGCTGATACAATTTCAGTTGCTTTTTACTGCAGCTACATTCTTGGCTACGATGTTTGCAGCGTTAACAGCAGTTTTTGGCATGAATTTTGTCGACGATGTCTTCGAGCATCCAACTAGTTTCCATTGGATAGTTTACTTGACCTTGATTGCCTGTGGTTTTGTGTATGTCTCTTTTCTATTATATTTTAGGTACAAGAAAATCTTCCCATTGTAA 1179 41.05 MLGVKKRGHGNRSWIKIDQNGDSEVLELEKATIMRHCSLPSRDMRLLDPLFLCPSTILGREKAIVVSLEQIRCIITSDEVILMNSLDGCAAQYKSELCKRLQANKDQSGKELKSMYNYFVHLSDDLPFEFRALELALELTCSFLDTQVREMEMEIYPLLDDLASSINTLNLERVRRFKGNLLTLTQQVQKVHDEIEHLVDDDGDMAEMYLTEKKQRLESNIRSNSYLETNYFGKQLPKSAPISPVGSSNGTHKLQRAFSSIVNSSSLMSSSNSGDNIEQLEMLLEAYFVVIDDMLSKLLSLKESIDDTEDLINIKLGNVQNQLIQFQLLFTAATFLATMFAALTAVFGMNFVDDVFEHPTSFHWIVYLTLIACGFVYVSFLLYFRYKKIFPL 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 881381 884223 - MC08g0129 Mch8g0141 693762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0141 392 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 5 389 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Mch8g0141 392 Gene3D - 3 85 - -
Mch8g0141 392 FunFam Magnesium transporter MRS2-1 2 85 - -
Mch8g0141 392 Pfam Magnesium transporter MRS2-like 17 218 - -
Mch8g0141 392 CDD Mrs2_Mfm1p-like 14 389 IPR039204 -
Mch8g0141 392 Gene3D Magnesium transport protein CorA, transmembrane region 89 323 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g0141 Mch-Chr8:881381 Mch8g1060 Mch-Chr8:7453566 8.64E-139 dispersed
Mch8g0141 Mch-Chr8:881381 Mch7g1013 Mch-Chr7:14312521 2.90E-85 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0141 K16075 - csv:101220835 613.994