Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0144 ATGCCGAGCATCTCGAACCTATATTCGATTCAAGAAATCTCACACCACAGTTCCAACGACGACTGTTGGATTGTTATCGATGGCAAGGTATACGATTTGACGTCATATTTGGACGAGCATCCTGGTGGAGATGATGTTATTCTTGCAGCAACTGGCAGAGATGCCACAGATGACTTTGAAGATGCCGGCCATAGCAAAGACGCAAGAGAACTGATGCAGAAGTTCTATATTGGTGAGCTTGATGCATCTTCTTCAGCAATCCCAGAACTCAAAACGGAGCAACTCGACGATTATGCAGCTCGGGTTCAGGGCTTGGCAAAGCAATACTGGGCTGCTCCTGTTGCAATGCTTGGTATTTCTGTGGTAATTGGCTGGTTATTCTTGCGCAACAAATGA 396 45.96 MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAARVQGLAKQYWAAPVAMLGISVVIGWLFLRNK 131
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 897967 900221 + MC08g0132 Mch8g0144 693765

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0144 131 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Mch8g0144 131 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Mch8g0144 131 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Mch8g0144 131 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Mch8g0144 131 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Mch8g0144 131 SMART Cyt_b5_2 8 81 IPR001199 -
Mch8g0144 131 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 85 IPR036400 -
Mch8g0144 131 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Mch8g0144 131 PANTHER CYTOCHROME B5 6 120 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Mch8g0144 131 Gene3D - 3 86 IPR036400 -
Mch8g0144 131 FunFam Cytochrome b5 type B 3 85 - -
Mch8g0144 131 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 81 IPR001199 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0144 K23490 - - csv:101220127 218.394
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2268 Mch-Chr6:24772305 Mch8g0144 Mch-Chr8:897967 5.28E-32 dispersed
Mch7g0872 Mch-Chr7:13249802 Mch8g0144 Mch-Chr8:897967 3.65E-34 dispersed
Mch8g0144 Mch-Chr8:897967 Mch8g3179 Mch-Chr8:33995153 3.16E-15 dispersed
Mch8g0144 Mch-Chr8:897967 Mch5g0194 Mch-Chr5:1248593 5.73E-36 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Mch6g1825 . 1 135 NADPH P450 reductases AT5G53560 78.5 1.1e-58 222.6
Mch5g0194 . 1 133 NADPH P450 reductases AT5G53560 68.4 1.0e-51 199.5
Mch7g0872 . 50 184 NADPH P450 reductases AT5G53560 66.7 9.7e-50 193.0
Mch6g2268 . 8 136 NADPH P450 reductases AT5G53560 65.9 1.3e-46 182.6
Mch6g2268 . 3 134 NADPH P450 reductases AT5G48810 62.7 7.3e-48 186.8
Mch7g0872 . 50 182 NADPH P450 reductases AT5G48810 63.0 2.1e-47 185.3
Mch5g0194 . 1 132 NADPH P450 reductases AT5G48810 64.2 2.8e-47 184.9
Mch6g1825 . 1 134 NADPH P450 reductases AT5G48810 58.1 3.7e-44 174.5
Mch5g0510 . 176 312 NADPH P450 reductases AT5G48810 51.1 7.6e-37 150.2
Mch5g0194 . 22 135 NADPH P450 reductases AT2G32720 84.2 6.7e-51 196.8
Mch7g0872 . 71 182 NADPH P450 reductases AT2G32720 78.6 1.3e-46 182.6
Mch6g2268 . 23 134 NADPH P450 reductases AT2G32720 69.6 3.4e-42 167.9
Mch6g1825 . 22 133 NADPH P450 reductases AT2G32720 66.1 7.0e-40 160.2
Mch8g0144 . 1 130 NADPH P450 reductases AT1G26340 59.7 1.1e-40 162.9
Mch5g1349 . 2 243 NADPH P450 reductases AT5G17770 87.6 1.9e-124 442.2
Mch6g1825 . 1 135 NADPH P450 reductases AT5G53560 78.5 1.1e-58 222.6
Mch5g0194 . 1 133 NADPH P450 reductases AT5G53560 68.4 1.0e-51 199.5
Mch7g0872 . 50 184 NADPH P450 reductases AT5G53560 66.7 9.7e-50 193.0
Mch6g2268 . 8 136 NADPH P450 reductases AT5G53560 65.9 1.3e-46 182.6
Mch6g2268 . 3 134 NADPH P450 reductases AT5G48810 62.7 7.3e-48 186.8
Mch7g0872 . 50 182 NADPH P450 reductases AT5G48810 63.0 2.1e-47 185.3
Mch5g0194 . 1 132 NADPH P450 reductases AT5G48810 64.2 2.8e-47 184.9
Mch6g1825 . 1 134 NADPH P450 reductases AT5G48810 58.1 3.7e-44 174.5
Mch5g0510 . 176 312 NADPH P450 reductases AT5G48810 51.1 7.6e-37 150.2
Mch5g0194 . 22 135 NADPH P450 reductases AT2G32720 84.2 6.7e-51 196.8
Mch7g0872 . 71 182 NADPH P450 reductases AT2G32720 78.6 1.3e-46 182.6
Mch6g2268 . 23 134 NADPH P450 reductases AT2G32720 69.6 3.4e-42 167.9
Mch6g1825 . 22 133 NADPH P450 reductases AT2G32720 66.1 7.0e-40 160.2
Mch8g0144 . 1 130 NADPH P450 reductases AT1G26340 59.7 1.1e-40 162.9
Mch5g1349 . 2 243 NADPH P450 reductases AT5G17770 87.6 1.9e-124 442.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013997 0 1 0 0 1 1 1 1 1 1 0 1 1 1 1 1 1 2 0 1 1 0 1 0 1 0 1 1 2 1 24