Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g0168 | CCTCCCGCCTCCGCCTCCGCCGCCGGCGTCGGCCTCGGCTACGGCATCGCCATCGCTGTCAGCATCCTCGTCTTCATCTCCACCATCATGCTCGTCTCCTACGCCTGCATTCGAGTCAAATCCAACCGCCCCCGCACCGCCGCCGCCGCCCCTCCCCCTCCCCCTCCCTCCGCCGACAATGTCGTCGTCCTCATGCTCGGATTAGATGGATCGATCATCGAATCGTACCCTAAATTGGTGCTCGGAGAGAGCCGCCGCCTCCCCGCGCCCAACCACGGCACCTGCTCGATTTGCTTGTCCGATTACCAGCCCAAGGATAGCCTCCGCTGCATTCCGGAGTGCCGTCACTGTTTCCATGCGGATTGCATCGACGAATGGCTGCGTATGAGCGCGACTTGTCCGTTATGTAGAAATTCCCCTGCTCCTACGCCTGTTGCTACTCCTCTCTCCGAGTTCGCTCCTCTGGCT | 468 | 62.18 | PPASASAAGVGLGYGIAIAVSILVFISTIMLVSYACIRVKSNRPRTAAAAPPPPPPSADNVVVLMLGLDGSIIESYPKLVLGESRRLPAPNHGTCSICLSDYQPKDSLRCIPECRHCFHADCIDEWLRMSATCPLCRNSPAPTPVATPLSEFAPLA | 156 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 1082346 | 1082813 | + | MC08g0154 | Mch8g0168 | 693789 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g0168 | 156 | PANTHER | RING-H2 FINGER PROTEIN ATL67 | 7 | 47 | IPR044289 | GO:0016567(InterPro)|GO:0016740(InterPro) | |
Mch8g0168 | 156 | SMART | ring_2 | 95 | 136 | IPR001841 | - | |
Mch8g0168 | 156 | Pfam | Ring finger domain | 94 | 137 | IPR001841 | - | |
Mch8g0168 | 156 | ProSiteProfiles | Zinc finger RING-type profile. | 95 | 137 | IPR001841 | - | |
Mch8g0168 | 156 | SUPERFAMILY | RING/U-box | 94 | 141 | - | - | |
Mch8g0168 | 156 | CDD | RING-H2_EL5-like | 95 | 137 | - | - | |
Mch8g0168 | 156 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 64 | 142 | IPR013083 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g0887 | Mch-Chr10:6267128 | Mch8g0168 | Mch-Chr8:1082346 | 3.03E-35 | dispersed | |
Mch10g1222 | Mch-Chr10:9793283 | Mch8g0168 | Mch-Chr8:1082346 | 1.12E-24 | dispersed | |
Mch1g0982 | Mch-Chr1:12934982 | Mch8g0168 | Mch-Chr8:1082346 | 2.75E-30 | dispersed | |
Mch5g1335 | Mch-Chr5:14304949 | Mch8g0168 | Mch-Chr8:1082346 | 2.31E-10 | dispersed | |
Mch5g1527 | Mch-Chr5:16258227 | Mch8g0168 | Mch-Chr8:1082346 | 1.49E-30 | dispersed | |
Mch8g0168 | Mch-Chr8:1082346 | Mch9g1446 | Mch-Chr9:16852177 | 2.82E-13 | dispersed | |
Mch8g0168 | Mch-Chr8:1082346 | Mch5g0473 | Mch-Chr5:3192583 | 2.90E-37 | transposed |
Pathway information
