Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g0191 | ATGGCGTTGCAGAATATTGGTGCCTCAAACCGTGATGATGCCTTCTATAGGTATAAGATGCCTAAGATGGTTACTAAAATTGAAGGTAGAGGTAATGGCATCAAGACTAACGTTGTTAATATGGTTGAAATTGCTAAAGCCTTGGGCAGACCTGCCTCTTACACTACCAAGTACTTTGGATGTGAGCTTGGAGCACAATCCAAGTTTGATGAGAAAACTGGAACTTCTCTTGTAAATGGCGCTCATGATACAGCAAAGCTTGCTGGGCTTCTTGAGAACTTCATCAAGAAATATGTTCAATGCTATGGTTGTGGAAACCCTGAAACTGAGATAATCATTACAAAGACGCAGATGATCACTATGAAATGTGCTGCCTGTGGATTCATATCTGATGTTGACATGAGAGATAAGCTCACAACATTTATTCTCAAGAATCCTCCTGAACAGAAGAAAGGATCAAAAGACAAGAAAGCAATGAGGAGGGCTGAGAAGGAACGGCTTAAGGAGGGAGAGGCTGCAGATGAAGAACAGAAGAAACTGAAGAAGGATTCAGTAAAGAAGAAAAGCACTGCTGGTAATACAAAGGATGCTGTAACCAAAGTGCCCAGCAAGAAGAAGAACAATGGCTCGGATGAGGATCATTCCCCAACTCGTAGCCAAGCTGGTGATAATGACCACGCAGCTGATGACGATGAGGATGAGGATGATGTACAGTGGCAAACAGACACATCTTTGGAAGCAGCTAAGCAGCGTATTCAGGAGCAGTTGAGTGCTGTCACTGCTGATATGGTCATGCTCTCTACTACAGAAGAGAACAAGTCATCAAAGAAGTCCACCGAGAATGAGAAGTCACAGGTCAATGGAAACAAGAATGGAAATGGAATCTCCGCCCATGGAGCGCTAGTTCATGAGATCAAAGATTATTTGAAGAAAGGTTCCTCCGCAGCTGAGCTTAAATCATTTTTGGAATCTCTTTCTGGAACTCGCCAAGAGGTTGTGAATGCCTTAGTCGAGTGTCTATTTGATGGAGTTGGGAAAGGCTTTTCAAAGGAGGTGTTGAAAAAGAAGAGCTTCTTGGCTGCAGCTGCCGCTCAGGAGGGATCGTCGCAGATAATTCTTCTACGTGCCATTGAATCTTTGTGTCTCAATACTAATCCCGAGGCTGGTAAGGAGGTTGCCCTTGTCCTGAAATCACTATATGATGGCGATGTGCTAGAGGAGGAATTTGTATTAGAATGGTACCAACAGGGTCTGGCTGGCGAAAACAAAAGTTCTCAAATCTGGAAGCATGTGAAGCCCTTCATTGAATGGCTCCAGAATGCCGAGTCGGAGACAGAAGAAGAAGAGTAA | 1350 | 43.85 | MALQNIGASNRDDAFYRYKMPKMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKCAACGFISDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLKEGEAADEEQKKLKKDSVKKKSTAGNTKDAVTKVPSKKKNNGSDEDHSPTRSQAGDNDHAADDDEDEDDVQWQTDTSLEAAKQRIQEQLSAVTADMVMLSTTEENKSSKKSTENEKSQVNGNKNGNGISAHGALVHEIKDYLKKGSSAAELKSFLESLSGTRQEVVNALVECLFDGVGKGFSKEVLKKKSFLAAAAAQEGSSQIILLRAIESLCLNTNPEAGKEVALVLKSLYDGDVLEEEFVLEWYQQGLAGENKSSQIWKHVKPFIEWLQNAESETEEEE | 449 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 1259309 | 1262939 | - | MC08g0175 | Mch8g0191 | 693812 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g0191 | 449 | Pfam | Domain found in IF2B/IF5 | 11 | 127 | IPR002735 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Mch8g0191 | 449 | SMART | eIF2Bneu4 | 15 | 129 | IPR002735 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Mch8g0191 | 449 | Coils | Coil | 159 | 179 | - | - | |
Mch8g0191 | 449 | Gene3D | - | 2 | 104 | - | - | |
Mch8g0191 | 449 | Pfam | eIF4-gamma/eIF5/eIF2-epsilon | 370 | 448 | IPR003307 | GO:0005515(InterPro) | |
Mch8g0191 | 449 | FunFam | Eukaryotic translation initiation factor 5 | 105 | 145 | - | - | |
Mch8g0191 | 449 | Gene3D | - | 105 | 145 | - | - | |
Mch8g0191 | 449 | MobiDBLite | consensus disorder prediction | 269 | 295 | - | - | |
Mch8g0191 | 449 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR | 3 | 444 | IPR045196 | GO:0001731(PANTHER)|GO:0001732(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0005092(PANTHER)|GO:0005829(PANTHER)|GO:0006413(InterPro)|GO:0071074(PANTHER) | |
Mch8g0191 | 449 | Gene3D | - | 296 | 449 | - | - | |
Mch8g0191 | 449 | CDD | W2_eIF5 | 296 | 441 | - | - | |
Mch8g0191 | 449 | SMART | 542_3 | 356 | 444 | IPR003307 | GO:0005515(InterPro) | |
Mch8g0191 | 449 | SUPERFAMILY | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 10 | 101 | IPR016189 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Mch8g0191 | 449 | MobiDBLite | consensus disorder prediction | 148 | 190 | - | - | |
Mch8g0191 | 449 | ProSiteProfiles | W2 domain profile. | 291 | 448 | IPR003307 | GO:0005515(InterPro) | |
Mch8g0191 | 449 | MobiDBLite | consensus disorder prediction | 199 | 225 | - | - | |
Mch8g0191 | 449 | SUPERFAMILY | Zinc-binding domain of translation initiation factor 2 beta | 98 | 133 | IPR016190 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Mch8g0191 | 449 | SUPERFAMILY | ARM repeat | 299 | 442 | IPR016024 | - | |
Mch8g0191 | 449 | MobiDBLite | consensus disorder prediction | 143 | 238 | - | - | |
Mch8g0191 | 449 | FunFam | Eukaryotic translation initiation factor 5 | 1 | 104 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch8g0191 | K03262 | - | csv:101210873 | 736.102 |