Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0191 ATGGCGTTGCAGAATATTGGTGCCTCAAACCGTGATGATGCCTTCTATAGGTATAAGATGCCTAAGATGGTTACTAAAATTGAAGGTAGAGGTAATGGCATCAAGACTAACGTTGTTAATATGGTTGAAATTGCTAAAGCCTTGGGCAGACCTGCCTCTTACACTACCAAGTACTTTGGATGTGAGCTTGGAGCACAATCCAAGTTTGATGAGAAAACTGGAACTTCTCTTGTAAATGGCGCTCATGATACAGCAAAGCTTGCTGGGCTTCTTGAGAACTTCATCAAGAAATATGTTCAATGCTATGGTTGTGGAAACCCTGAAACTGAGATAATCATTACAAAGACGCAGATGATCACTATGAAATGTGCTGCCTGTGGATTCATATCTGATGTTGACATGAGAGATAAGCTCACAACATTTATTCTCAAGAATCCTCCTGAACAGAAGAAAGGATCAAAAGACAAGAAAGCAATGAGGAGGGCTGAGAAGGAACGGCTTAAGGAGGGAGAGGCTGCAGATGAAGAACAGAAGAAACTGAAGAAGGATTCAGTAAAGAAGAAAAGCACTGCTGGTAATACAAAGGATGCTGTAACCAAAGTGCCCAGCAAGAAGAAGAACAATGGCTCGGATGAGGATCATTCCCCAACTCGTAGCCAAGCTGGTGATAATGACCACGCAGCTGATGACGATGAGGATGAGGATGATGTACAGTGGCAAACAGACACATCTTTGGAAGCAGCTAAGCAGCGTATTCAGGAGCAGTTGAGTGCTGTCACTGCTGATATGGTCATGCTCTCTACTACAGAAGAGAACAAGTCATCAAAGAAGTCCACCGAGAATGAGAAGTCACAGGTCAATGGAAACAAGAATGGAAATGGAATCTCCGCCCATGGAGCGCTAGTTCATGAGATCAAAGATTATTTGAAGAAAGGTTCCTCCGCAGCTGAGCTTAAATCATTTTTGGAATCTCTTTCTGGAACTCGCCAAGAGGTTGTGAATGCCTTAGTCGAGTGTCTATTTGATGGAGTTGGGAAAGGCTTTTCAAAGGAGGTGTTGAAAAAGAAGAGCTTCTTGGCTGCAGCTGCCGCTCAGGAGGGATCGTCGCAGATAATTCTTCTACGTGCCATTGAATCTTTGTGTCTCAATACTAATCCCGAGGCTGGTAAGGAGGTTGCCCTTGTCCTGAAATCACTATATGATGGCGATGTGCTAGAGGAGGAATTTGTATTAGAATGGTACCAACAGGGTCTGGCTGGCGAAAACAAAAGTTCTCAAATCTGGAAGCATGTGAAGCCCTTCATTGAATGGCTCCAGAATGCCGAGTCGGAGACAGAAGAAGAAGAGTAA 1350 43.85 MALQNIGASNRDDAFYRYKMPKMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKCAACGFISDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLKEGEAADEEQKKLKKDSVKKKSTAGNTKDAVTKVPSKKKNNGSDEDHSPTRSQAGDNDHAADDDEDEDDVQWQTDTSLEAAKQRIQEQLSAVTADMVMLSTTEENKSSKKSTENEKSQVNGNKNGNGISAHGALVHEIKDYLKKGSSAAELKSFLESLSGTRQEVVNALVECLFDGVGKGFSKEVLKKKSFLAAAAAQEGSSQIILLRAIESLCLNTNPEAGKEVALVLKSLYDGDVLEEEFVLEWYQQGLAGENKSSQIWKHVKPFIEWLQNAESETEEEE 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1259309 1262939 - MC08g0175 Mch8g0191 693812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0191 449 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743(InterPro)|GO:0006413(InterPro)
Mch8g0191 449 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743(InterPro)|GO:0006413(InterPro)
Mch8g0191 449 Coils Coil 159 179 - -
Mch8g0191 449 Gene3D - 2 104 - -
Mch8g0191 449 Pfam eIF4-gamma/eIF5/eIF2-epsilon 370 448 IPR003307 GO:0005515(InterPro)
Mch8g0191 449 FunFam Eukaryotic translation initiation factor 5 105 145 - -
Mch8g0191 449 Gene3D - 105 145 - -
Mch8g0191 449 MobiDBLite consensus disorder prediction 269 295 - -
Mch8g0191 449 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 444 IPR045196 GO:0001731(PANTHER)|GO:0001732(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0005092(PANTHER)|GO:0005829(PANTHER)|GO:0006413(InterPro)|GO:0071074(PANTHER)
Mch8g0191 449 Gene3D - 296 449 - -
Mch8g0191 449 CDD W2_eIF5 296 441 - -
Mch8g0191 449 SMART 542_3 356 444 IPR003307 GO:0005515(InterPro)
Mch8g0191 449 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743(InterPro)|GO:0006413(InterPro)
Mch8g0191 449 MobiDBLite consensus disorder prediction 148 190 - -
Mch8g0191 449 ProSiteProfiles W2 domain profile. 291 448 IPR003307 GO:0005515(InterPro)
Mch8g0191 449 MobiDBLite consensus disorder prediction 199 225 - -
Mch8g0191 449 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743(InterPro)|GO:0006413(InterPro)
Mch8g0191 449 SUPERFAMILY ARM repeat 299 442 IPR016024 -
Mch8g0191 449 MobiDBLite consensus disorder prediction 143 238 - -
Mch8g0191 449 FunFam Eukaryotic translation initiation factor 5 1 104 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0191 K03262 - csv:101210873 736.102