Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0225 ATGGCTGCCGCCCCCTCGCTTCGTGAGGAAAATGTTTACATGGCGAAGCTTGCCGAGCAGGCCGAGCGCTACGAAGAGATGGTCGAGTTTATGGAGAAGGTTTCCGCTTCCATCGACAAAGAGGAGCTCACCGTTGAGGAGAGAAATCTCCTTTCCGTCGCCTACAAGAACGTCATCGGTGCTCGCAGGGCTTCCTGGCGAATCATTTCCTCCATCGAGCAGAAGGAGGAGAGCCGAGGCAACGACGACCATGTCTCTGTGATCCGTGACTACAGATCCAAAATTGAGACCGAGCTCTCCAATATCTGTGATGGAATCCTCAAACTCCTCGATTCCAGACTCATTCCCTCTGCCGCCTCCGGAGATTCCAAGGTCTTTTACCTCAAAATGAAGGGCGATTACCACAGATACCTCGCTGAATTCAAGACCGGAGCCGAAAGGAAGGAGGCCGCCGAAAGTACCCTCACTGCTTACAAAGCCGCTCAGGATATTGCAAATGCTGAGTTACCTCCTACACATCCGATCCGACTTGGATTGGCCCTTAACTTCTCTGTATTCTACTATGAAATTTTGAATTCACCTGACCGTGCCTGCAATCTTGCAAAACAGGCCTTTGATGAAGCTATCGCTGAGTTAGATACCCTTGGCGAGGAATCCTACAAAGATAGTACTTTGATTATGCAACTTCTTCGCGATAACCTCACCCTCTGGACCTCCGATATGCAGGATGACGGTGCCGATGAGATTAAAGAAGCTCCTCCGAAGCGCGAGGATGAAAAGCAGTGA 786 50.51 MAAAPSLREENVYMAKLAEQAERYEEMVEFMEKVSASIDKEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIRDYRSKIETELSNICDGILKLLDSRLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPPKREDEKQ 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1504843 1507184 + MC08g0208 Mch8g0225 693846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0225 261 MobiDBLite consensus disorder prediction 243 261 - -
Mch8g0225 261 FunFam 14-3-3 protein epsilon 5 251 - -
Mch8g0225 261 PIRSF 14-3-3 2 250 IPR000308 -
Mch8g0225 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Mch8g0225 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Mch8g0225 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Mch8g0225 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Mch8g0225 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Mch8g0225 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Mch8g0225 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Mch8g0225 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Mch8g0225 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Mch8g0225 261 Coils Coil 7 34 - -
Mch8g0225 261 SUPERFAMILY 14-3-3 protein 8 240 IPR036815 -
Mch8g0225 261 MobiDBLite consensus disorder prediction 242 261 - -
Mch8g0225 261 Gene3D - 2 251 IPR036815 -
Mch8g0225 261 SMART 1433_4 8 251 IPR023410 -
Mch8g0225 261 PANTHER 14-3-3 PROTEIN 8 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g0225 Mch-Chr8:1504843 Mch8g0290 Mch-Chr8:2009044 2.67E-123 dispersed
Mch8g2395 Mch-Chr8:27032396 Mch8g0225 Mch-Chr8:1504843 6.92E-151 transposed
Mch11g0676 Mch-Chr11:4418215 Mch8g0225 Mch-Chr8:1504843 3.72E-166 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0225 K06630 - csv:101220164 505.753