Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0225 ATGGCTGCCGCCCCCTCGCTTCGTGAGGAAAATGTTTACATGGCGAAGCTTGCCGAGCAGGCCGAGCGCTACGAAGAGATGGTCGAGTTTATGGAGAAGGTTTCCGCTTCCATCGACAAAGAGGAGCTCACCGTTGAGGAGAGAAATCTCCTTTCCGTCGCCTACAAGAACGTCATCGGTGCTCGCAGGGCTTCCTGGCGAATCATTTCCTCCATCGAGCAGAAGGAGGAGAGCCGAGGCAACGACGACCATGTCTCTGTGATCCGTGACTACAGATCCAAAATTGAGACCGAGCTCTCCAATATCTGTGATGGAATCCTCAAACTCCTCGATTCCAGACTCATTCCCTCTGCCGCCTCCGGAGATTCCAAGGTCTTTTACCTCAAAATGAAGGGCGATTACCACAGATACCTCGCTGAATTCAAGACCGGAGCCGAAAGGAAGGAGGCCGCCGAAAGTACCCTCACTGCTTACAAAGCCGCTCAGGATATTGCAAATGCTGAGTTACCTCCTACACATCCGATCCGACTTGGATTGGCCCTTAACTTCTCTGTATTCTACTATGAAATTTTGAATTCACCTGACCGTGCCTGCAATCTTGCAAAACAGGCCTTTGATGAAGCTATCGCTGAGTTAGATACCCTTGGCGAGGAATCCTACAAAGATAGTACTTTGATTATGCAACTTCTTCGCGATAACCTCACCCTCTGGACCTCCGATATGCAGGATGACGGTGCCGATGAGATTAAAGAAGCTCCTCCGAAGCGCGAGGATGAAAAGCAGTGA 786 50.51 MAAAPSLREENVYMAKLAEQAERYEEMVEFMEKVSASIDKEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIRDYRSKIETELSNICDGILKLLDSRLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPPKREDEKQ 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1504843 1507184 + MC08g0208 Mch8g0225 693846

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0225 261 MobiDBLite consensus disorder prediction 243 261 - -
Mch8g0225 261 FunFam 14-3-3 protein epsilon 5 251 - -
Mch8g0225 261 PIRSF 14-3-3 2 250 IPR000308 -
Mch8g0225 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Mch8g0225 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Mch8g0225 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Mch8g0225 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Mch8g0225 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Mch8g0225 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Mch8g0225 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Mch8g0225 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Mch8g0225 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Mch8g0225 261 Coils Coil 7 34 - -
Mch8g0225 261 SUPERFAMILY 14-3-3 protein 8 240 IPR036815 -
Mch8g0225 261 MobiDBLite consensus disorder prediction 242 261 - -
Mch8g0225 261 Gene3D - 2 251 IPR036815 -
Mch8g0225 261 SMART 1433_4 8 251 IPR023410 -
Mch8g0225 261 PANTHER 14-3-3 PROTEIN 8 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0225 K06630 - - csv:101220164 505.753
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g0225 Mch-Chr8:1504843 Mch8g0290 Mch-Chr8:2009044 2.67E-123 dispersed
Mch8g2395 Mch-Chr8:27032396 Mch8g0225 Mch-Chr8:1504843 6.92E-151 transposed
Mch11g0676 Mch-Chr11:4418215 Mch8g0225 Mch-Chr8:1504843 3.72E-166 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Mch8g0225 . 4 242 14-3-3 family AT4G09000 91.2 1.2e-119 426.4
Mch11g0676 . 5 242 14-3-3 family AT4G09000 89.9 6.8e-118 420.6
Mch8g2395 . 6 241 14-3-3 family AT4G09000 86.4 5.6e-112 401.0
Mch8g0290 . 124 360 14-3-3 family AT4G09000 75.1 9.2e-99 357.1
Mch8g0211 . 57 294 14-3-3 family AT4G09000 69.2 1.2e-90 330.1
Mch9g2079 . 46 282 14-3-3 family AT4G09000 71.5 7.8e-90 327.4
Mch8g0138 . 4 263 14-3-3 family AT4G09000 64.9 2.0e-85 312.8
Mch11g0666 . 1 215 14-3-3 family AT4G09000 70.0 2.0e-77 286.2
Mch11g0676 . 5 259 14-3-3 family AT1G78300 91.4 4.2e-126 447.6
Mch8g0225 . 8 262 14-3-3 family AT1G78300 91.0 2.1e-125 445.3
Mch8g2395 . 6 253 14-3-3 family AT1G78300 87.5 9.4e-118 419.9
Mch8g0290 . 125 361 14-3-3 family AT1G78300 76.4 2.3e-100 362.1
Mch8g0211 . 59 303 14-3-3 family AT1G78300 68.8 8.9e-92 333.6
Mch9g2079 . 50 298 14-3-3 family AT1G78300 69.7 2.2e-90 328.9
Mch8g0138 . 8 281 14-3-3 family AT1G78300 63.8 1.1e-86 316.6
Mch11g0666 . 1 222 14-3-3 family AT1G78300 66.1 8.1e-77 283.9
Mch8g2395 . 6 259 14-3-3 family AT5G38480 89.4 3.3e-123 438.0
Mch8g0225 . 6 252 14-3-3 family AT5G38480 85.4 1.6e-114 409.1
Mch11g0676 . 6 253 14-3-3 family AT5G38480 85.5 3.1e-113 404.8
Mch8g0290 . 124 365 14-3-3 family AT5G38480 74.8 3.7e-98 354.8
Mch8g0211 . 63 307 14-3-3 family AT5G38480 72.5 3.2e-94 341.7
Mch9g2079 . 50 298 14-3-3 family AT5G38480 72.1 6.7e-92 334.0
Mch8g0138 . 8 279 14-3-3 family AT5G38480 65.3 2.2e-87 318.9
Mch11g0666 . 1 227 14-3-3 family AT5G38480 68.6 3.8e-79 291.6
Mch8g0225 . 3 242 14-3-3 family AT1G35160 90.4 2.6e-119 425.2
Mch11g0676 . 4 242 14-3-3 family AT1G35160 89.5 6.3e-118 420.6
Mch8g2395 . 6 240 14-3-3 family AT1G35160 86.4 6.7e-112 400.6
Mch8g0290 . 115 360 14-3-3 family AT1G35160 74.0 5.0e-99 357.8
Mch8g0211 . 56 294 14-3-3 family AT1G35160 69.7 4.5e-92 334.7
Mch9g2079 . 41 282 14-3-3 family AT1G35160 71.3 7.3e-90 327.4
Mch8g0138 . 8 263 14-3-3 family AT1G35160 65.5 3.2e-85 312.0
Mch11g0666 . 1 215 14-3-3 family AT1G35160 69.6 1.9e-77 286.2
Mch8g2395 . 5 254 14-3-3 family AT5G16050 84.8 7.0e-116 413.7
Mch8g0225 . 3 253 14-3-3 family AT5G16050 78.9 1.4e-108 389.4
Mch11g0676 . 4 252 14-3-3 family AT5G16050 79.1 2.3e-106 382.1
Mch8g0290 . 124 362 14-3-3 family AT5G16050 71.5 2.9e-93 338.6
Mch8g0211 . 60 303 14-3-3 family AT5G16050 65.4 8.3e-85 310.5
Mch9g2079 . 45 289 14-3-3 family AT5G16050 64.4 6.0e-83 304.3
Mch8g0138 . 3 287 14-3-3 family AT5G16050 57.8 1.1e-79 293.5
Mch11g0666 . 15 221 14-3-3 family AT5G16050 70.5 4.9e-77 284.6
Mch8g0290 . 123 360 14-3-3 family AT5G10450 87.4 3.0e-114 408.3
Mch8g0225 . 3 251 14-3-3 family AT5G10450 77.2 5.7e-105 377.5
Mch11g0676 . 1 251 14-3-3 family AT5G10450 76.6 2.8e-104 375.2
Mch8g2395 . 7 259 14-3-3 family AT5G10450 74.0 1.8e-103 372.5
Mch8g0211 . 63 294 14-3-3 family AT5G10450 67.2 1.3e-85 313.2
Mch9g2079 . 45 282 14-3-3 family AT5G10450 66.0 2.1e-83 305.8
Mch8g0138 . 3 263 14-3-3 family AT5G10450 59.1 7.7e-78 287.3
Mch11g0666 . 15 215 14-3-3 family AT5G10450 68.2 1.5e-73 273.1
Mch8g2395 . 4 261 14-3-3 family AT3G02520 90.0 5.1e-127 450.7
Mch8g0225 . 6 252 14-3-3 family AT3G02520 86.7 9.6e-118 419.9
Mch11g0676 . 5 259 14-3-3 family AT3G02520 85.2 3.7e-117 417.9
Mch8g0290 . 124 362 14-3-3 family AT3G02520 76.2 1.1e-100 363.2
Mch8g0211 . 59 299 14-3-3 family AT3G02520 71.2 8.2e-93 337.0
Mch9g2079 . 50 299 14-3-3 family AT3G02520 67.8 1.3e-90 329.7
Mch8g0138 . 8 281 14-3-3 family AT3G02520 63.1 2.1e-88 322.4
Mch11g0666 . 1 220 14-3-3 family AT3G02520 69.4 2.3e-79 292.4
Mch8g0290 . 123 360 14-3-3 family AT5G65430 88.2 1.5e-115 412.5
Mch11g0676 . 1 242 14-3-3 family AT5G65430 79.4 1.0e-103 373.2
Mch8g0225 . 8 242 14-3-3 family AT5G65430 80.1 1.7e-103 372.5
Mch8g2395 . 7 241 14-3-3 family AT5G65430 78.8 3.9e-103 371.3
Mch8g0211 . 63 294 14-3-3 family AT5G65430 69.4 5.1e-87 317.8
Mch9g2079 . 50 282 14-3-3 family AT5G65430 69.5 1.6e-85 312.8
Mch8g0138 . 8 263 14-3-3 family AT5G65430 62.2 6.0e-80 294.3
Mch11g0666 . 15 215 14-3-3 family AT5G65430 70.1 5.8e-75 277.7
Mch8g0211 . 61 300 14-3-3 family AT2G42590 77.1 2.4e-103 372.1
Mch9g2079 . 48 300 14-3-3 family AT2G42590 75.2 1.6e-102 369.4
Mch8g0138 . 6 277 14-3-3 family AT2G42590 67.6 7.5e-97 350.5
Mch11g0666 . 1 224 14-3-3 family AT2G42590 75.0 4.3e-92 334.7
Mch8g2395 . 8 248 14-3-3 family AT2G42590 73.0 5.6e-92 334.3
Mch8g0225 . 8 248 14-3-3 family AT2G42590 70.5 2.1e-91 332.4
Mch11g0676 . 8 248 14-3-3 family AT2G42590 70.1 1.8e-90 329.3
Mch8g0290 . 125 362 14-3-3 family AT2G42590 64.7 4.4e-81 298.1
Mch8g0211 . 59 299 14-3-3 family AT1G22300 79.7 5.8e-104 374.0
Mch9g2079 . 47 287 14-3-3 family AT1G22300 77.2 1.3e-100 362.8
Mch8g0138 . 5 268 14-3-3 family AT1G22300 69.3 4.0e-97 351.3
Mch8g2395 . 4 246 14-3-3 family AT1G22300 69.5 9.5e-91 330.1
Mch11g0666 . 1 220 14-3-3 family AT1G22300 77.3 9.5e-91 330.1
Mch8g0225 . 8 246 14-3-3 family AT1G22300 69.9 1.5e-88 322.8
Mch11g0676 . 8 246 14-3-3 family AT1G22300 68.6 9.9e-88 320.1
Mch8g0290 . 125 362 14-3-3 family AT1G22300 64.3 2.9e-79 292.0
Mch8g0211 . 59 303 14-3-3 family AT1G34760 79.6 1.2e-104 376.3
Mch9g2079 . 47 290 14-3-3 family AT1G34760 80.7 2.0e-104 375.6
Mch8g0138 . 5 271 14-3-3 family AT1G34760 73.4 1.1e-99 359.8
Mch11g0666 . 1 223 14-3-3 family AT1G34760 79.4 3.9e-92 334.7
Mch8g0225 . 8 245 14-3-3 family AT1G34760 71.4 5.2e-89 324.3
Mch8g2395 . 4 250 14-3-3 family AT1G34760 69.6 9.0e-89 323.6
Mch11g0676 . 8 245 14-3-3 family AT1G34760 70.2 2.2e-87 318.9
Mch8g0290 . 125 361 14-3-3 family AT1G34760 64.1 5.4e-78 287.7
Mch9g2079 . 44 297 14-3-3 family AT1G26480 85.8 1.1e-116 416.4
Mch8g0138 . 2 278 14-3-3 family AT1G26480 78.7 8.5e-114 406.8
Mch8g0211 . 60 300 14-3-3 family AT1G26480 77.2 5.2e-103 370.9
Mch11g0666 . 1 221 14-3-3 family AT1G26480 77.4 1.7e-93 339.3
Mch8g0225 . 8 260 14-3-3 family AT1G26480 72.0 2.9e-93 338.6
Mch8g2395 . 5 256 14-3-3 family AT1G26480 72.4 1.9e-92 335.9
Mch11g0676 . 8 258 14-3-3 family AT1G26480 71.0 5.4e-92 334.3
Mch8g0290 . 125 358 14-3-3 family AT1G26480 66.2 2.1e-80 295.8
Mch9g2079 . 47 280 14-3-3 family AT1G78220 52.3 1.7e-63 239.6
Mch11g0666 . 1 213 14-3-3 family AT1G78220 50.5 7.0e-54 207.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000486 6 4 5 6 5 2 5 3 3 3 3 3 6 3 2 6 3 6 6 3 3 3 3 3 3 3 3 6 4 0 114