Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g0255 | ATGGCGCCGAATTTTGACCTTGGAGTCGGGAGCCTTTTGTGTGCAGAAGATAATTGTATTTTCGATAATAACGATGATGACGACGAAACGCTAGAAGAGGAGTTTGTGCTGCCTCCTTACTATCTAAGAACTAATGGAACTCGGAGTCGTCGGAATCGGACCCCTTGCGGCGGCTGCGGCGACGGCGAAAGGTTTCCCTTTGTGAGCGATGAGTGTTTGACCGGAATGGTCGAGAAGGAAACCCACCACGTGCCGGTGGACGGTTACCTCTCCAAGTTGCAGAACGGCGAGTTGGATGTCGGAGCTAGAAGAGACGCCGTCGATTGGATTGGAAAGGTGAGTGCTCATTTCAGCTTTGGACCTCTATCTACATACTTAGCCGTAAACTACTTGGATCGCTTCCTCTCGGCTTACGATCTACCCAAGGGGAAGGCTTGGACAATGCAGTTGCTGGCTGTGGCATGTATGGCCCTTGCAGCCAAATTGGAGGAGACTGAAGTCCCACTCTCTCTGGATTTACAGGTGGGTGGATCAAAGTTTGTGTTTGAAGCAAGAACCATTGAAAGAATGGAGCTTTTAGTCTTGACCACTTTGGGGTGGAGAATGCAAGCAGTTACCCCTTTCTCGTTTATCGATCATTGCCTCCGCAAGATTCAAGACGACGAAATTGCAGTCAAAACGTCGCTCGGCCGATCCATTCATCTAGTATTGAACATCATACAAGGGATTGACTTCTTGGAATTCAAACCTTCTGAAATAGCAGCAGCTGTGGCAATATCAGTAGCTGGAGAAGCTCAACCAGTGGACCCTGAGAAAGCAATTCCTCTTCTCATTCAGCAACTCCAAATGGAAAGAGTTTTGAAATGCATTAAATTGATTAATGGATGCGGGTGTGGGTCGGCAAAGGACTCGAGAGCGTCGATGTCGGAGCCCCGTAGCCCGAGCGGGGTGCTGGACGTGACGTGCTTAAGCTATAAAAGCAATGATACAGCAGTTGGGTCATGTGCAAACTCTTCTTCTCATCATAACAGTTCAGATGCTGCAAAGAGGAGGAGACTGAACAGACCCTGTGAAGTGGAGCTATAG | 1086 | 48.71 | MAPNFDLGVGSLLCAEDNCIFDNNDDDDETLEEEFVLPPYYLRTNGTRSRRNRTPCGGCGDGERFPFVSDECLTGMVEKETHHVPVDGYLSKLQNGELDVGARRDAVDWIGKVSAHFSFGPLSTYLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMALAAKLEETEVPLSLDLQVGGSKFVFEARTIERMELLVLTTLGWRMQAVTPFSFIDHCLRKIQDDEIAVKTSLGRSIHLVLNIIQGIDFLEFKPSEIAAAVAISVAGEAQPVDPEKAIPLLIQQLQMERVLKCIKLINGCGCGSAKDSRASMSEPRSPSGVLDVTCLSYKSNDTAVGSCANSSSHHNSSDAAKRRRLNRPCEVEL | 361 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 1702853 | 1706146 | - | MC08g0234 | Mch8g0255 | 693876 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g0255 | 361 | SMART | Cyclin_C_2 | 205 | 326 | IPR004367 | - | |
Mch8g0255 | 361 | SUPERFAMILY | Cyclin-like | 188 | 294 | IPR036915 | - | |
Mch8g0255 | 361 | Gene3D | - | 86 | 203 | - | - | |
Mch8g0255 | 361 | Pfam | Cyclin, C-terminal domain | 205 | 297 | IPR004367 | - | |
Mch8g0255 | 361 | SMART | cyclin_7 | 108 | 196 | IPR013763 | - | |
Mch8g0255 | 361 | FunFam | D2/4-type cyclin | 86 | 201 | - | - | |
Mch8g0255 | 361 | CDD | CYCLIN_AtCycD-like_rpt1 | 102 | 200 | - | - | |
Mch8g0255 | 361 | MobiDBLite | consensus disorder prediction | 344 | 361 | - | - | |
Mch8g0255 | 361 | Gene3D | - | 74 | 289 | - | - | |
Mch8g0255 | 361 | PANTHER | CYCLINS | 79 | 271 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Mch8g0255 | 361 | MobiDBLite | consensus disorder prediction | 332 | 361 | - | - | |
Mch8g0255 | 361 | FunFam | D6-type cyclin | 202 | 291 | - | - | |
Mch8g0255 | 361 | Pfam | Cyclin, N-terminal domain | 74 | 202 | IPR006671 | - | |
Mch8g0255 | 361 | SUPERFAMILY | Cyclin-like | 65 | 202 | IPR036915 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g0481 | Mch-Chr10:3122085 | Mch8g0255 | Mch-Chr8:1702853 | 8.03E-45 | dispersed | |
Mch1g1237 | Mch-Chr1:14685965 | Mch8g0255 | Mch-Chr8:1702853 | 3.33E-47 | dispersed | |
Mch4g0724 | Mch-Chr4:4900652 | Mch8g0255 | Mch-Chr8:1702853 | 7.48E-40 | dispersed | |
Mch8g0255 | Mch-Chr8:1702853 | Mch8g0665 | Mch-Chr8:4726293 | 2.90E-52 | dispersed | |
Mch9g2211 | Mch-Chr9:22631366 | Mch8g0255 | Mch-Chr8:1702853 | 1.08E-43 | transposed | |
Mch1g1386 | Mch-Chr1:15753203 | Mch8g0255 | Mch-Chr8:1702853 | 7.41E-90 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch8g0255 | K18810 | - | csv:101216206 | 548.895 |