Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0255 ATGGCGCCGAATTTTGACCTTGGAGTCGGGAGCCTTTTGTGTGCAGAAGATAATTGTATTTTCGATAATAACGATGATGACGACGAAACGCTAGAAGAGGAGTTTGTGCTGCCTCCTTACTATCTAAGAACTAATGGAACTCGGAGTCGTCGGAATCGGACCCCTTGCGGCGGCTGCGGCGACGGCGAAAGGTTTCCCTTTGTGAGCGATGAGTGTTTGACCGGAATGGTCGAGAAGGAAACCCACCACGTGCCGGTGGACGGTTACCTCTCCAAGTTGCAGAACGGCGAGTTGGATGTCGGAGCTAGAAGAGACGCCGTCGATTGGATTGGAAAGGTGAGTGCTCATTTCAGCTTTGGACCTCTATCTACATACTTAGCCGTAAACTACTTGGATCGCTTCCTCTCGGCTTACGATCTACCCAAGGGGAAGGCTTGGACAATGCAGTTGCTGGCTGTGGCATGTATGGCCCTTGCAGCCAAATTGGAGGAGACTGAAGTCCCACTCTCTCTGGATTTACAGGTGGGTGGATCAAAGTTTGTGTTTGAAGCAAGAACCATTGAAAGAATGGAGCTTTTAGTCTTGACCACTTTGGGGTGGAGAATGCAAGCAGTTACCCCTTTCTCGTTTATCGATCATTGCCTCCGCAAGATTCAAGACGACGAAATTGCAGTCAAAACGTCGCTCGGCCGATCCATTCATCTAGTATTGAACATCATACAAGGGATTGACTTCTTGGAATTCAAACCTTCTGAAATAGCAGCAGCTGTGGCAATATCAGTAGCTGGAGAAGCTCAACCAGTGGACCCTGAGAAAGCAATTCCTCTTCTCATTCAGCAACTCCAAATGGAAAGAGTTTTGAAATGCATTAAATTGATTAATGGATGCGGGTGTGGGTCGGCAAAGGACTCGAGAGCGTCGATGTCGGAGCCCCGTAGCCCGAGCGGGGTGCTGGACGTGACGTGCTTAAGCTATAAAAGCAATGATACAGCAGTTGGGTCATGTGCAAACTCTTCTTCTCATCATAACAGTTCAGATGCTGCAAAGAGGAGGAGACTGAACAGACCCTGTGAAGTGGAGCTATAG 1086 48.71 MAPNFDLGVGSLLCAEDNCIFDNNDDDDETLEEEFVLPPYYLRTNGTRSRRNRTPCGGCGDGERFPFVSDECLTGMVEKETHHVPVDGYLSKLQNGELDVGARRDAVDWIGKVSAHFSFGPLSTYLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMALAAKLEETEVPLSLDLQVGGSKFVFEARTIERMELLVLTTLGWRMQAVTPFSFIDHCLRKIQDDEIAVKTSLGRSIHLVLNIIQGIDFLEFKPSEIAAAVAISVAGEAQPVDPEKAIPLLIQQLQMERVLKCIKLINGCGCGSAKDSRASMSEPRSPSGVLDVTCLSYKSNDTAVGSCANSSSHHNSSDAAKRRRLNRPCEVEL 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1702853 1706146 - MC08g0234 Mch8g0255 693876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0255 361 SMART Cyclin_C_2 205 326 IPR004367 -
Mch8g0255 361 SUPERFAMILY Cyclin-like 188 294 IPR036915 -
Mch8g0255 361 Gene3D - 86 203 - -
Mch8g0255 361 Pfam Cyclin, C-terminal domain 205 297 IPR004367 -
Mch8g0255 361 SMART cyclin_7 108 196 IPR013763 -
Mch8g0255 361 FunFam D2/4-type cyclin 86 201 - -
Mch8g0255 361 CDD CYCLIN_AtCycD-like_rpt1 102 200 - -
Mch8g0255 361 MobiDBLite consensus disorder prediction 344 361 - -
Mch8g0255 361 Gene3D - 74 289 - -
Mch8g0255 361 PANTHER CYCLINS 79 271 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Mch8g0255 361 MobiDBLite consensus disorder prediction 332 361 - -
Mch8g0255 361 FunFam D6-type cyclin 202 291 - -
Mch8g0255 361 Pfam Cyclin, N-terminal domain 74 202 IPR006671 -
Mch8g0255 361 SUPERFAMILY Cyclin-like 65 202 IPR036915 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0481 Mch-Chr10:3122085 Mch8g0255 Mch-Chr8:1702853 8.03E-45 dispersed
Mch1g1237 Mch-Chr1:14685965 Mch8g0255 Mch-Chr8:1702853 3.33E-47 dispersed
Mch4g0724 Mch-Chr4:4900652 Mch8g0255 Mch-Chr8:1702853 7.48E-40 dispersed
Mch8g0255 Mch-Chr8:1702853 Mch8g0665 Mch-Chr8:4726293 2.90E-52 dispersed
Mch9g2211 Mch-Chr9:22631366 Mch8g0255 Mch-Chr8:1702853 1.08E-43 transposed
Mch1g1386 Mch-Chr1:15753203 Mch8g0255 Mch-Chr8:1702853 7.41E-90 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0255 K18810 - csv:101216206 548.895