Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0272 ATGGTTCATGCTGGCTCTACCCAATTTTATCATAAATTGGGGATTCAAAGTGTTCATAGATGCAATAAGTTAGATATTAGTGTCAAGGGAAAGACTCGTCTACACCTTGTTACCATCATTCCTACATCACACGGTTTGAGGTATGATTCTGGAAGTCTTCAGCTGTTACGCAGTGTGAGTCGCCCAAGGTATCCTGTGCCTTCCAGAGCAAATTTTTTTGTGTGTCGATCTGTTCTGGAATCAGGTGGCGGAGCTGGGACTGCTGTTCTAAAATCTGCAGCTGTGGTTCTGACGAGATCTTATGGGGCTTTACGTGGAAGTCCTCTGTTACTTAAATTGATTCCAGCAGCTTGTATCATTGCTTTTGCTGCTTGGGGTGTTGGGCCTCTTATGCGTTTTGGGAGGGTTCTATTTCTTCATGAGCCAGATGGCAGTTGGAAGAAAAGTAGTACATACTACGTTACGACTTCTTATGTTCAGCCTTTACTGCTGTGGACGGGAGCTACACTGATCTGCAGGGCATTGGATCCAGTAGTGTTACCTTCAGTAGCCAGTCAGGCCGTAAAACAACGACTTCTGAATTTTGTTCGATCTTTGTCTACTGTTCTGGCATTCGCTTATTGTATATCAAGCTTGATTCAACAAGTACAAAAATTCGCTACTGAATCAAATGACTCAAGTGATGCAAGAAATATGGGCTTTGATTTTGCTGGGAAAGCTGTTTATACTGCAGTCTGGATTGCCGCCCTTTCATTGTTCATGGAGTTGCTCGGGTTTTCTACCCAGAAGTGGCTCACAGCTGGGGGTCTTGGAACTGTATTGCTTACTCTTGCTGGTCGTGAGATATTTACTAATTTTCTTTCAAGTGTAATGATTCATGCAACAAGACCATTTGTGGTAAATGAATGGATTCAGACAAAGATTGATGGATACGAAGTCTCTGGAACAGTTGAGCACGTTGGTTGGTGGTCGCCAACCATTATCCGAGGCGATGATCGTGAAGCAGTCCATATTCCAAATCACAAATTTACTGTCAGTATTGTGCGGAATCTTACCCAGAAGACTCATTGGCGTATCAAGACCCATCTTGCCATCAGCCACTTAGATGTTAATAAGATTAATTATATTGTAGCTGATATGCGTAAAGTTTTGTCCAAAAATCCTCAAGTGGAACAGCAAAGGTTACACCGTAGAATCTTTTTGGATAACATCAATCCTGAAAATCAGGCTCTTATGATTATGGTTTCTTGCTTTGTGAAAACTTCTCGTTTTGAAGAATACCTGTGTGTCAAGGAGGCAATTCTCTTGGATCTCCTCAGGGTTATCAGCCATCATAGGGCCCGGCTTGCCACGCCAATTCGCACTGTTCAGAAAATATACAGTGAGGCTGCTGACTTGGAAAATGTACCGTTTTCCGAGACCATGTATTCTCCTCGTTCTGGAGCAGCTACTAACCGTCCTCTGCTTCTTATTGAGCCATCTTATAAAATCAACGGCGACGATAAAGCCAAAGTCTCTAGTCGTCCCGCTCGCCCATTGAATGAAGAAAAGGAAGCCAAGCAAGAGGCAGTCTCAACATCAGGAACGAAACCCTCCGATGCAGGAGCTGGATCAATGGATGATAAAAAATCAACTTCTCCATCTGGTGCCACTTCCAAGCCTTCAACAGGGCCAATGTCCAACACACAGACCCAGAACAATCTAGCACCCGAAACTTCAGAACAAAGCAGTATCGAAAAGCCTGAGATTAAAGGAGAAAAGAAATATCTAATGGGACTGAACTCCAAGGATACTACACCAAGAGTGACTTCGCCGAAAAGGCCATCCTCAGCCTCTGAACCCGGCAGCGAGAAAGCTGATATTCCTTTCTCTAGCTCGCAGAATAAACAAGACGGTGAGAAGCTTTCTGCATCATCAGTGACCAGGCCACCATTGGAGGAGAATATAGTCCTGGGAGTTGCCTTGGAAGGCTCCAAAAGAACTCTTCCAATTGATGAAGATTTGGATCCATCTCCCTTTCACTCTCCTGCAGATTCAAAAGAAATGGCCACACAGAGGAATGGGAGCGAGTTTCCTCCCAATAGTAAGGATATAAAAGATGGCCAGATGCCTGCAGTTCCAAGCGCCACGAAAAATGATTGA 2142 44.07 MVHAGSTQFYHKLGIQSVHRCNKLDISVKGKTRLHLVTIIPTSHGLRYDSGSLQLLRSVSRPRYPVPSRANFFVCRSVLESGGGAGTAVLKSAAVVLTRSYGALRGSPLLLKLIPAACIIAFAAWGVGPLMRFGRVLFLHEPDGSWKKSSTYYVTTSYVQPLLLWTGATLICRALDPVVLPSVASQAVKQRLLNFVRSLSTVLAFAYCISSLIQQVQKFATESNDSSDARNMGFDFAGKAVYTAVWIAALSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIDGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVSIVRNLTQKTHWRIKTHLAISHLDVNKINYIVADMRKVLSKNPQVEQQRLHRRIFLDNINPENQALMIMVSCFVKTSRFEEYLCVKEAILLDLLRVISHHRARLATPIRTVQKIYSEAADLENVPFSETMYSPRSGAATNRPLLLIEPSYKINGDDKAKVSSRPARPLNEEKEAKQEAVSTSGTKPSDAGAGSMDDKKSTSPSGATSKPSTGPMSNTQTQNNLAPETSEQSSIEKPEIKGEKKYLMGLNSKDTTPRVTSPKRPSSASEPGSEKADIPFSSSQNKQDGEKLSASSVTRPPLEENIVLGVALEGSKRTLPIDEDLDPSPFHSPADSKEMATQRNGSEFPPNSKDIKDGQMPAVPSATKND 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1854322 1861231 + MC08g0251 Mch8g0272 693893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0272 713 MobiDBLite consensus disorder prediction 596 611 - -
Mch8g0272 713 MobiDBLite consensus disorder prediction 524 576 - -
Mch8g0272 713 MobiDBLite consensus disorder prediction 619 643 - -
Mch8g0272 713 Gene3D - 194 296 - -
Mch8g0272 713 MobiDBLite consensus disorder prediction 499 523 - -
Mch8g0272 713 MobiDBLite consensus disorder prediction 678 692 - -
Mch8g0272 713 Pfam Mechanosensitive ion channel, beta-domain 282 352 IPR006685 GO:0016020(InterPro)|GO:0055085(InterPro)
Mch8g0272 713 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 699 IPR045042 -
Mch8g0272 713 SUPERFAMILY Sm-like ribonucleoproteins 282 352 IPR010920 -
Mch8g0272 713 Gene3D - 298 353 IPR023408 -
Mch8g0272 713 MobiDBLite consensus disorder prediction 660 674 - -
Mch8g0272 713 MobiDBLite consensus disorder prediction 499 647 - -
Mch8g0272 713 MobiDBLite consensus disorder prediction 577 591 - -
Mch8g0272 713 MobiDBLite consensus disorder prediction 660 713 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0606 Mch-Chr10:4099653 Mch8g0272 Mch-Chr8:1854322 7.52E-230 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0272 K22047 - csv:101213477 1174.07