Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g0280 | ATGAAAGGCGATTTCGGTCACCCCAAGAGCAAAACTTCCAATATGTTATCCAAATTCCATCTCGCCCACCCGTTTACCCACCCGCCCCACCAACCCGACAACGACATCTCCTCCGCCGCCGCCGCCGCTGCCGGCCCTCCGCCGCTCAAACATCACCTCCATGACCATACCTCCGCCGCCGATGGCTCGACCATTGAGGTGGTACGGCGGCCGAGGGGCCGCCCCCCGGGCTCCAAGAACAAACCCAAACCGCCGCTCGTCGTGACCCGAGAACCCGAACCCGCTATGCGGCCGTACGTTCTAGAAGTGCCCGGCGGAAACGACGTCGTTGAAGCCATTGCCCGATTCTGCCGTCGGAAGAATATGGGTCTTTGTGTACTTAACGGCTCCGGTATCGTCGCTAACGTCTCCCTCCGGCAGCCCTCTGCGACGCCCGGCGCGACCGTCACGTTCCACGGCCGCTTCGAGATCCTCTCTATTTGCGCCACCGTGTTACCTCACACGACGCCGTACCCCGTCCCCAACGGCTTCACTATCTCCCTCGCCGGACCGCAGGGCCAAATCGTCGGCGGATTGGTCGCCGGCGCGTTAATCGCCGCCGGTACCGTTTTCATCGTCGCCTCATCGTTTAACAATCCGTTGTACCATCGGCTTCCCGACGAGGAGGAGATTAAGAATTTGGGCTCCGGCGGCAGCGGCGGCGAGGGTCACTCTCCACACGTCTCCGGCGGTGGAGACAGTAGCGGCCACGGACAGCCTATGGTGGAGCCGTGTGGAGTGGCTAGCTACAGTTGCCACGCGCCCTCCGACGTAATTTGGGCGCCGACGGCGAGGCAACCGCCGCCGCCA | 849 | 63.13 | MKGDFGHPKSKTSNMLSKFHLAHPFTHPPHQPDNDISSAAAAAAGPPPLKHHLHDHTSAADGSTIEVVRRPRGRPPGSKNKPKPPLVVTREPEPAMRPYVLEVPGGNDVVEAIARFCRRKNMGLCVLNGSGIVANVSLRQPSATPGATVTFHGRFEILSICATVLPHTTPYPVPNGFTISLAGPQGQIVGGLVAGALIAAGTVFIVASSFNNPLYHRLPDEEEIKNLGSGGSGGEGHSPHVSGGGDSSGHGQPMVEPCGVASYSCHAPSDVIWAPTARQPPPP | 283 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 1926045 | 1926893 | + | MC08g0259 | Mch8g0280 | 693901 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g0280 | 283 | ProSiteProfiles | PPC domain profile profile. | 93 | 231 | IPR005175 | - | |
Mch8g0280 | 283 | FunFam | AT-hook motif nuclear-localized protein | 97 | 229 | - | - | |
Mch8g0280 | 283 | CDD | DUF296 | 97 | 210 | IPR005175 | - | |
Mch8g0280 | 283 | Gene3D | - | 96 | 228 | - | - | |
Mch8g0280 | 283 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 54 | 249 | IPR014476 | GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Mch8g0280 | 283 | MobiDBLite | consensus disorder prediction | 223 | 255 | - | - | |
Mch8g0280 | 283 | MobiDBLite | consensus disorder prediction | 1 | 89 | - | - | |
Mch8g0280 | 283 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 97 | 211 | IPR005175 | - | |
Mch8g0280 | 283 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 95 | 222 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch8g0280 | Mch-Chr8:1926045 | Mch8g2974 | Mch-Chr8:32422099 | 1.39E-52 | dispersed | |
Mch6g1244 | Mch-Chr6:9789390 | Mch8g0280 | Mch-Chr8:1926045 | 1.03E-41 | transposed | |
Mch11g0706 | Mch-Chr11:4654981 | Mch8g0280 | Mch-Chr8:1926045 | 4.15E-98 | wgd |
Pathway information
