Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0293 ATGGTGGTTCGAAAAGTCGGCAAGTACGAGGTAGGGAGGACGATTGGAGAAGGTACTTTTGCGAAGGTAAAGTTCGCTCAAAACACTGAGACTGGCGAGAGTGTTGCTATGAAAGTCCTCGATCGGAGCACCATAATCAAGCACAAGATGGTCGACCAGATAAAAAAGGAGATTTCTATCATGAAGCTTGTGAGGCACCCTTATGTCGTTCGTCTTCATGAGGCATGGACTGATTTTCTGAACCGTACTAAGATTTATATAATCTTGGAGTACATTACTGGTGGTGAATTGTTTGACAAAATAGTTCATCATGGACGGCTTAGTGAAGCTGAATCTAGGAAATACTTCCAACAGCTAATTGATGGTGTAGATTATTGCCATATCAAGGGAGTATACCACAGAGATTTAAAGCCTGAAAATCTGCTACTTGACTCCCAAGGTAACTTAAAGATTTCAGACTTTGGCCTGAGTGCAATGCCGGAACAAGGAGGTAGCCTACTCCGCACAACATGTGGGACTCCAAATTATGTAGCACCAGAGGTGCTCAATCACAAGGGTTATGATGGTGCTATGGCAGATGTTTGGTCCTGTGGAGTAATCCTGTACGTGTTGATGGCAGGATATCTTCCATTTGATGAGCTTGATCTCACCACGTTATATATACAGATTGAGAGAGCCGACTTTTCATGTCCATCTTGGTTCCCTGTGGGGGCAAAAGCCTTGATTCATAGAATATTCGATCCCAATCCTTCAACTCGGATTACCATTGAAAAGATCAGAGAGGAGGAGTGGTTCAAGAAAAATTATGCTCCAGTCAAACTTGTCGAATATGAAGATGTAAATCTGGATGATGTAAATGCTGTCTTTGATGATCCTGAGGTTGAAAGGACTGAAGATCGACATGGTATCAAGGACATGAGCCCTCTGACCCTTAATGCATTTGATTTAATAATTCTGTCTCAAGGCTTAAACCTGGGGACGATGTTCGACCGTGGCCAGGATTCTATGAAGTACCCGACACGCTTCATCTGCCAAAAGCCTGCCAATGTTTTATTATCAACCATGGAAGTTGTAGCTCAATCAATGGGTTTCAAAACACACATCCGGAATTACAAGATGAGAGTAGAAGGCCCATCAGCAAGCAAAACTTCTTATTTCTCAGTCATTATGGAAATTTTTGAAGTCGCTCCGACATTCTTCATGGTGGACATTCAGAAAGCAGCTGGGGAAACCAGCGAGTACCTCAAGTTCTACAAGATCTTTTATGGCAATCTCGAAGATATCATCTGGAAACCTTCAATCGACCCCGGAAAATCAAGGACCTCGAAGAACAAGAGTAAGAAACGTTGA 1350 42.74 MVVRKVGKYEVGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMVDQIKKEISIMKLVRHPYVVRLHEAWTDFLNRTKIYIILEYITGGELFDKIVHHGRLSEAESRKYFQQLIDGVDYCHIKGVYHRDLKPENLLLDSQGNLKISDFGLSAMPEQGGSLLRTTCGTPNYVAPEVLNHKGYDGAMADVWSCGVILYVLMAGYLPFDELDLTTLYIQIERADFSCPSWFPVGAKALIHRIFDPNPSTRITIEKIREEEWFKKNYAPVKLVEYEDVNLDDVNAVFDDPEVERTEDRHGIKDMSPLTLNAFDLIILSQGLNLGTMFDRGQDSMKYPTRFICQKPANVLLSTMEVVAQSMGFKTHIRNYKMRVEGPSASKTSYFSVIMEIFEVAPTFFMVDIQKAAGETSEYLKFYKIFYGNLEDIIWKPSIDPGKSRTSKNKSKKR 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2023557 2032014 - MC08g0271 Mch8g0293 693914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0293 449 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165(InterPro)
Mch8g0293 449 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524(InterPro)
Mch8g0293 449 Pfam Protein kinase domain 9 265 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0293 449 Gene3D Transferase(Phosphotransferase) domain 1 3 308 - -
Mch8g0293 449 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 415 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Mch8g0293 449 FunFam Non-specific serine/threonine protein kinase 306 430 - -
Mch8g0293 449 FunFam Non-specific serine/threonine protein kinase 1 91 - -
Mch8g0293 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g0293 449 CDD CIPK_C 312 419 - -
Mch8g0293 449 ProSiteProfiles Protein kinase domain profile. 9 265 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0293 449 FunFam Non-specific serine/threonine protein kinase 2 305 - -
Mch8g0293 449 Gene3D Kinase associated domain 1, KA1 309 431 - -
Mch8g0293 449 SMART serkin_6 9 265 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0293 449 Pfam NAF domain 308 366 IPR004041 GO:0007165(InterPro)
Mch8g0293 449 SUPERFAMILY Protein kinase-like (PK-like) 6 291 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g0293 Mch-Chr8:2023557 Mch8g2989 Mch-Chr8:32521646 3.68E-129 dispersed
Mch6g0715 Mch-Chr6:4914990 Mch8g0293 Mch-Chr8:2023557 1.51E-206 transposed
Mch1g1398 Mch-Chr1:15858440 Mch8g0293 Mch-Chr8:2023557 1.12E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77569 PF00069 Pkinase 6.40E-70 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0293 - - - 0.0