Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0305 ATGGCTCTTCACTCAGCTTTCTTTCTTCTTTTGTTCCTCGCCTCCTCCTCCTCCATCTCTTCTTCTCAAGTTCTCACTAATGATAATCAGTCTCAGTTCTTCTTTCTCATGCAAAAGACTGCCTCAGGGAAGTTCCTGTCTGAGTGGGGTCTTTCCGGAGGCAAATCCTTCTGCAACTTCACTGGAATCAGCTGCAATGACCGTGGCCGCGTCGTTGGGATTGATATCTCTGGCAAACTTCTTTCTGGTAGCTTCCCTGGAGATGTATGCTCCTACCTGCCAGAGCTGAGAGTTCTTCGTCTTGCTGGTACCGGTTTTCGGGGACGTTTTCCAGCAGGAATCACCAACTGCTCTCTCCTTGAAGTGCTTGACATGAGCTCTTTGTATCTCAATGGAACAATCCCGGACTTGTCACAAATGAAACAGCTGCGTGTGCTTGACCTCTCGTACAATTCCTTCACTGGCGACTTTCCCATGTCGGTTTTCGACCTTTTTAACCTCGAGGTGCTGAATTTCAATGAGAACTACAACCTCAACTTATGGAAACTGCCTGAAAACATCTCCAGCTTGAAGAAGCTGAAATCCATGGTCTTGACTACCTGTATGTTAGACGGTGAAATCCCGCGGTCAATAGGGAGCATGACATCTCTAGTTGATCTTGAACTCAGTGGGAACTTTCTCAAGGGAGAGATTCCAAAAGAAATCTCCTTACTGAAGAACTTGAAACAACTTGAACTCTATTACAATGAACTCACAGGAAACATACCAGAGGAGCTTGGGAACCTAACAGAGCTTGTGGACGTGGACATGTCAGTGAACCTTTTGACAGGAGAGCTTCCAGAATCTATTTGTAAACTTCCCAAGCTTGAAGTTCTACAGATTTACAACAATAGCCTCACAGGAGAGATTCCAAGTGTACTAGAAAACTCAACAACACTCACTATGCTATCACTTTATGACAACTTTCTCACAGGACAGATTCCAAAAAAGTTGGGGAAGTTCTCACCAATGGTTGTCCTCGACTTGTCGGAAAATCACCTGTCCGGATCACTGCCATTGGATATTTGCAGGGGGGGGAAATTGCTGTACTTTCTTGTCCTGGAAAACAGGCTTTCTGGAGAAATTCCTCCGAGCTTTGGTGAATGCGAGTCGCTTTTAAGGTTTAGGATTAGTTTCAATCAGGTGGTGGGCACAATTCCTGAAGGAGTTTTGGGTCTCCCCCATGTTTCGATTATTGATGTTGCTCATAATAATCTAGCCGGTTCGATTTCGAATTCGATCTCACGGGCACAGAACTTGTCGGAATTGTTCTTGCAAAGAAACAGGATTTCTGGAGTTATACCCCCGGAGATTTCAGGAGCTACCAATCTGGTGAAGCTTGATCTCAGCAACAATCTTCTCTCCGGCCAGGTGCCACCGGAGATTGGAAATCTGAAGAAACTCAATCTGATGATGTTACAGGGGAACCAGCTGGATTCTTCAATCCCAAATTCGATTTCGTCGTTGAAATCCCTCAACGTTCTCGATCTCTCCAATAATCTTTTATCCGGGACAATCCCAGAAAGTTTGAGCCAATTGTTCCCGAGTTCTCTGAATTTTTCGAACAATCAACTTTCAGGTCCAATTCCTCCATCTCTGATCAAACAGGGGTTGGCCGATAGCTTCTCCGGCAACCCTAATCTGTGTGTTCCACCGGCGTATTTCATTTCACCAGATCAGAAATTCCCCATTTGTTCACATTTTTCCTTCCAAAAACGCCTAAATTTCATCTGGGCGATCGGGATTCCACTGCTCATCTTCTTCGCCGGCGCTGCCCTGTTTCTAAAACGCCGGATTTCGAGAAAGAGAGCAGAGATCGAAAACGAAGAAACCCTCTCTTCGTTATTCTTCCACTTGCAGAGGTTCGACCAAATCGGGATTCTCGAAGCCATGGTGGAAAAGAACATCGTGGGCCACGGGGGCTCCGGAACGGTCTACAAAATCGAGCTCGGAAACGGAGAAATCGTCGCCGTGAAGAGGCTGTGGAATCGAAGGGCGAAACATCTCTTCGATAAGGAATTGAAAACGGAAGTCGAAACACTAGGCAGTATAAGGCACAAGAACATCGTGAAACTCTATAGCTACTTCTCGGGCCTAAATTGCAGCCTTCTGGTTTACGAATATATGCCCAACGGCAACCTCTGGGACGCGCTCCATAGAGGGTGGATCCATCTCGATTGGCCCACGCGCCACCGCATCGCGGTGGGGGTGGCCCAAGGCCTCGCCTATCTCCACCACGACCTCTCGCCGCCGGTCATCCACAGAGACATCAAAACCACAAACATTCTATTAGACGCAGATTACCAACCGAAAGTTGCAGATTTCGGCATAGCCAAAGTTCTTCAAGGAAGCAAAGATTCAACAAATTCCGTAATCGCCGGAACCTACGGCTATTTAGCCCCAGAATACGCATATTCATCCAAGGCAACAACCAAATGCGATGTGTACAGCTTCGGGGTGGTGCTAATGGAGCTGATTACCGGGAAGAAGCCGATTGAGGCGGAATACGGAGAGAACAAGAACATTGTGTTCTGGGTTTCGAACAAAGTGGACACAAAAGAAGGGGTTCTCGAGATTCTTGACAAAAGACTAAAAGGGTCGTTCAGGGATGAGATAATTAAGGCTCTGATAATCGCCATTCGCTGCACTTACAGGAATCCAGTGCTGCGACCCGCCATGGGAGAGGTGGTAGAGCTGCTGCAACAGGTGGATCCTTGCAAATTTGACCGACCGTTCAAAGAAGTCAAAAAAGTGGGAGGATACCCATGA 2808 46.94 MALHSAFFLLLFLASSSSISSSQVLTNDNQSQFFFLMQKTASGKFLSEWGLSGGKSFCNFTGISCNDRGRVVGIDISGKLLSGSFPGDVCSYLPELRVLRLAGTGFRGRFPAGITNCSLLEVLDMSSLYLNGTIPDLSQMKQLRVLDLSYNSFTGDFPMSVFDLFNLEVLNFNENYNLNLWKLPENISSLKKLKSMVLTTCMLDGEIPRSIGSMTSLVDLELSGNFLKGEIPKEISLLKNLKQLELYYNELTGNIPEELGNLTELVDVDMSVNLLTGELPESICKLPKLEVLQIYNNSLTGEIPSVLENSTTLTMLSLYDNFLTGQIPKKLGKFSPMVVLDLSENHLSGSLPLDICRGGKLLYFLVLENRLSGEIPPSFGECESLLRFRISFNQVVGTIPEGVLGLPHVSIIDVAHNNLAGSISNSISRAQNLSELFLQRNRISGVIPPEISGATNLVKLDLSNNLLSGQVPPEIGNLKKLNLMMLQGNQLDSSIPNSISSLKSLNVLDLSNNLLSGTIPESLSQLFPSSLNFSNNQLSGPIPPSLIKQGLADSFSGNPNLCVPPAYFISPDQKFPICSHFSFQKRLNFIWAIGIPLLIFFAGAALFLKRRISRKRAEIENEETLSSLFFHLQRFDQIGILEAMVEKNIVGHGGSGTVYKIELGNGEIVAVKRLWNRRAKHLFDKELKTEVETLGSIRHKNIVKLYSYFSGLNCSLLVYEYMPNGNLWDALHRGWIHLDWPTRHRIAVGVAQGLAYLHHDLSPPVIHRDIKTTNILLDADYQPKVADFGIAKVLQGSKDSTNSVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGKKPIEAEYGENKNIVFWVSNKVDTKEGVLEILDKRLKGSFRDEIIKALIIAIRCTYRNPVLRPAMGEVVELLQQVDPCKFDRPFKEVKKVGGYP 935
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2136812 2143116 + MC08g0281 Mch8g0305 693926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0305 935 Pfam Protein kinase domain 646 855 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0305 935 Gene3D Transferase(Phosphotransferase) domain 1 722 925 - -
Mch8g0305 935 SUPERFAMILY RNI-like 74 350 - -
Mch8g0305 935 ProSitePatterns Protein kinases ATP-binding region signature. 650 672 IPR017441 GO:0005524(InterPro)
Mch8g0305 935 FunFam Receptor protein-tyrosine kinase CEPR1 286 572 - -
Mch8g0305 935 Pfam Leucine Rich Repeat 504 526 IPR001611 GO:0005515(InterPro)
Mch8g0305 935 Pfam Leucine Rich Repeat 288 309 IPR001611 GO:0005515(InterPro)
Mch8g0305 935 Pfam Leucine Rich Repeat 142 161 IPR001611 GO:0005515(InterPro)
Mch8g0305 935 Pfam Leucine Rich Repeat 240 262 IPR001611 GO:0005515(InterPro)
Mch8g0305 935 Pfam Leucine Rich Repeat 456 478 IPR001611 GO:0005515(InterPro)
Mch8g0305 935 Pfam Leucine Rich Repeat 432 453 IPR001611 GO:0005515(InterPro)
Mch8g0305 935 Pfam Leucine Rich Repeat 530 546 IPR001611 GO:0005515(InterPro)
Mch8g0305 935 Pfam Leucine Rich Repeat 339 356 IPR001611 GO:0005515(InterPro)
Mch8g0305 935 SMART serkin_6 644 920 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0305 935 Gene3D Phosphorylase Kinase; domain 1 633 721 - -
Mch8g0305 935 PRINTS Leucine-rich repeat signature 457 470 - -
Mch8g0305 935 PRINTS Leucine-rich repeat signature 502 515 - -
Mch8g0305 935 SUPERFAMILY L domain-like 255 572 - -
Mch8g0305 935 SMART LRR_typ_2 238 262 IPR003591 -
Mch8g0305 935 SMART LRR_typ_2 334 358 IPR003591 -
Mch8g0305 935 SMART LRR_typ_2 164 190 IPR003591 -
Mch8g0305 935 SMART LRR_typ_2 286 310 IPR003591 -
Mch8g0305 935 SMART LRR_typ_2 502 526 IPR003591 -
Mch8g0305 935 SMART LRR_typ_2 455 478 IPR003591 -
Mch8g0305 935 FunFam leucine-rich repeat receptor-like protein kinase TDR 722 923 - -
Mch8g0305 935 FunFam receptor protein-tyrosine kinase CEPR1 627 721 - -
Mch8g0305 935 Gene3D Ribonuclease Inhibitor 294 572 IPR032675 -
Mch8g0305 935 Gene3D Ribonuclease Inhibitor 33 178 IPR032675 -
Mch8g0305 935 SUPERFAMILY Protein kinase-like (PK-like) 628 913 IPR011009 -
Mch8g0305 935 FunFam Leucine-rich repeat receptor-like protein kinase 180 282 - -
Mch8g0305 935 PANTHER LEUCINE RICH REPEAT KINASE 2 184 915 IPR051420 -
Mch8g0305 935 ProSiteProfiles Protein kinase domain profile. 644 926 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0305 935 Gene3D Ribonuclease Inhibitor 179 282 IPR032675 -
Mch8g0305 935 ProSitePatterns Serine/Threonine protein kinases active-site signature. 765 777 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0836 Mch-Chr4:5907015 Mch8g0305 Mch-Chr8:2136812 1.39E-82 dispersed
Mch7g0889 Mch-Chr7:13444948 Mch8g0305 Mch-Chr8:2136812 6.98E-67 dispersed
Mch8g0305 Mch-Chr8:2136812 Mch8g0317 Mch-Chr8:2218238 1.13E-68 dispersed
Mch4g1936 Mch-Chr4:21909440 Mch8g0305 Mch-Chr8:2136812 3.04E-82 transposed
Mch1g0344 Mch-Chr1:7250580 Mch8g0305 Mch-Chr8:2136812 2.49E-55 transposed
Mch1g1334 Mch-Chr1:15371501 Mch8g0305 Mch-Chr8:2136812 5.08E-54 wgd
Mch11g0743 Mch-Chr11:5014068 Mch8g0305 Mch-Chr8:2136812 1.23E-186 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77570 PF00069 Pkinase 7.50E-49 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0305 - - - 0.0