Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0317 ATGTTAACTACATCACATGACATCTTCATTCCACAATCACCTATCCACTCTTCTCCGGTTGTCTTTCTGAACTTTGCCAGGCGAATCGACCTCACCGGAGTAACGATGGGAGCATTCGAAATGTCCCGACTTCCGCTCCCTGTTTTCATCTTCTACTTCATCTCCATACCATTCTATGTAAGTTCACAAACTGTCAGCACTGACCATGCCATCTTGCTTAAGCTCAAAGAACAATGGGGGAATCCGCCATCTCTCTGGTTATGGAATTCCTCGTCCTCGCCCTGTGATTGGCCTGAGATCGTCTGTAGAGAAGGCGTGGTCACTGGAATCTCTCTCGGATGGAAAAATATCACTGGAGGAATCCCGGCTTCCATCTGTAACCTGAAAAACCTCACTGCTCTTGACCTTTCATGGAACTACATCCCTGGTGAGTTCCCGGAAGTTCTATACAACTGCTCCAATCTCAAATATCTTGATCTTTCAGGGAACTATTTTGTGGGTCCAATACCCCAAGGCATAGACCGAATTCAAACTCTGCAGTACATGGACCTTGGCGCCAACAACTTCTCAGGCGATATTCCAGCAACAATAGGCCGGTTGTCAGATTTGAGAACTTTGAACATTTGCAGAACTCAGTTAAATGGCACATTGCCAGTAGAAATTGGCAACTTGTCCAATCTTGAAACTTTGAAAATGGCGTACAACACTTTGCTGGTCCCATCGCCAATACCACAAGATTTCGGGAAACTGAAGAAGTTGAAGTACCTGTGGTTGACAAAATCGAATTTGATCAGCGAAATTCCAGAAAGCATACTGGATATTTTGAGCCTTGAGCACTTGGATTTATCCTGCAACAACTTGGTTGGCTCTATTCCTGCTGCGCTGTTCTCTTTGCAGAATTTAAGCAATTTATATCTCTACCAAAATCATTTATCCGGCGAGATACCCAGATCAATCCGAGCATCAAATTTACTTCATGTTGACCTCTCCACAAACAATTTAACTGGCACAATCCCGGAAGATTTTGGGAAGTTGAAAAGGCTGGAGGTCCTTAATTTGTTTGAGAATCATTTGTCTGGTGAGATTCCAGGGAGTTTAGGCCTAATTCCTACGCTGAAAGATCTTCGTGTTTTCAATAACAACTTAACTGGAGGCTTGCCACAAGAATTGGGTCTGCATTCAAATCTGAAAGCTCTCGAGGTCTCAAATAATACACTAAGTGGGCAGTTACCTGAACATCTCTGTAAAAATGGTGTCTTACAGGGAGTGGTTGCTTTTTCCAACCATCTTAGCGGCGAATTGCCGAAAGGGCTTGGAAGTTGCAGGACCCTACGCATAGTCCAGCTTTCTAATAACAATTTTTCTGGCGAAATACCTCTAGGTCTCTGGACTACTTTCAATCTATCAATCGTAATATTAGATGGAAACTCTTTCACAGGCAAGCTACCAGATAGCTTATCTTGGAATCTCACAAGACTGCAGATAAATAACAACAAATTTTGGGGTCAAATTCCTGATAACGTTTCTTCATGGCGAAACTTGGTTGTGTTTGAAGCAGGCAACAATCTGCTTTCTGGTAAAATTCCAGAGGAATTGACAAACCTTCCTCATCTTACCACACTCGTGTTGAATGGAAATCAACTCTCCGGCCGACTTCCATCGACAATTGTTTCATGGGAATCATTAAATACCCTAAATCTTTCAAGAAATGAACTTTCAGGCCATATTCCAGCAGCAATTGGTTCCCTTCCTAGCCTAATTTACCTGGATTTATCAGCTAATAACTTCTCAGGTGAAATCCCACCTGAAATTGGCCACTTAAAACTGGCTTCCCTCAACTTGTCTTCCAATCAGCTTTCAGGGAGAATCCCAGATGAGTACGAGAATCTAGCATACGGAAGGAGCTTCTTGAACAACACCAACTTATGTACCACCACCGATGTACTTAACCTCCCCACCTGTTACTCCAGACAAAGAGATTCAAAAGGACAGTCCTATAAATATCTTCCTCTCATTCTAGCTCTCATTGTCACCATGCTCGTAATTGCTTTACTATGGATCTTCTTCCTATATAGAGGTTATTACAGAAAGGATGAGAGATGCCACCCTGACACATGGAAGCTTACTTCATTCCAGAGACTGGACTTCACAGAAGCGAATATCTTATCAAATTTGACAGAAACTAATCTGATAGGAAGTGGTGGATCCGGCAAAGTGTACTGCATAGATATCAACTGTGCTGGTTATTATGTTGCTGTCAAAAGGATTTGGAGTAACAGGAAGTTAGATCAAAAGCTTGAGAAAGAATTTCAAGCAGAAGTTCAAATACTAGGCTCAATTCGGCATTCAAACATAGTGAAGTTGTTATGCTGCGTCTGGAATGAGAACTCAAAGCTCTTAGTCTACGAATACATGCAAAATCAGAGCCTAGATAAGTGGCTTCATAAAAGGAAGAGAAGGTTGAGGGCGGCTGCAATGGACTTTGTTGATCAATTTGTCTTAGACTGGCCGAGGAGGCTGCAGATTGCCATTGGAGCTGCACAAGGCCTCAGTTATATGCACCATGATTGCTCTCCACCAATCATTCATCGAGATGTGAAATCAAGTAACATCTTACTAGACCGTGAGTTCCAGGCAAGGATAGCAGATTTTGGACTGGCCAAGATGTTGGCCAGGCAGGGAGAGCCCCACACTCTGTCCGGAATAGCAGGATCTTTCGGTTACATAGCACCAGAGTATGCCTATAGAACGAAAGTCAATGAGAAGATTGATGTCTATAGCTTTGGGGTTGTACTCCTGGAACTCACTACAGGAAGAGAACCTAACTGTGGAGATGAGCACACAAGCCTAGCAGAGTGGGCATGGCAGCAATATAATGAAAGAAAGCCTATTATCGATGCTTTCGACGAGGAAATCACAAGCCCATGTTATTTGGAAGAGATGACTACTCTATTCAAACTTGGTCTAATTTGTACGAGCACATTACCTGAAATACGACCTTCTATGAAGGAGGTTCTGCACGTTCTACGCCAATGCAGCCCTTCAGAAGATTGTGATGGGAGAAAGATTGCAGGTGAGCTCAATGCTGTTCCCGTCCTTGGCACTCCTATATGA 3114 43.1 MLTTSHDIFIPQSPIHSSPVVFLNFARRIDLTGVTMGAFEMSRLPLPVFIFYFISIPFYVSSQTVSTDHAILLKLKEQWGNPPSLWLWNSSSSPCDWPEIVCREGVVTGISLGWKNITGGIPASICNLKNLTALDLSWNYIPGEFPEVLYNCSNLKYLDLSGNYFVGPIPQGIDRIQTLQYMDLGANNFSGDIPATIGRLSDLRTLNICRTQLNGTLPVEIGNLSNLETLKMAYNTLLVPSPIPQDFGKLKKLKYLWLTKSNLISEIPESILDILSLEHLDLSCNNLVGSIPAALFSLQNLSNLYLYQNHLSGEIPRSIRASNLLHVDLSTNNLTGTIPEDFGKLKRLEVLNLFENHLSGEIPGSLGLIPTLKDLRVFNNNLTGGLPQELGLHSNLKALEVSNNTLSGQLPEHLCKNGVLQGVVAFSNHLSGELPKGLGSCRTLRIVQLSNNNFSGEIPLGLWTTFNLSIVILDGNSFTGKLPDSLSWNLTRLQINNNKFWGQIPDNVSSWRNLVVFEAGNNLLSGKIPEELTNLPHLTTLVLNGNQLSGRLPSTIVSWESLNTLNLSRNELSGHIPAAIGSLPSLIYLDLSANNFSGEIPPEIGHLKLASLNLSSNQLSGRIPDEYENLAYGRSFLNNTNLCTTTDVLNLPTCYSRQRDSKGQSYKYLPLILALIVTMLVIALLWIFFLYRGYYRKDERCHPDTWKLTSFQRLDFTEANILSNLTETNLIGSGGSGKVYCIDINCAGYYVAVKRIWSNRKLDQKLEKEFQAEVQILGSIRHSNIVKLLCCVWNENSKLLVYEYMQNQSLDKWLHKRKRRLRAAAMDFVDQFVLDWPRRLQIAIGAAQGLSYMHHDCSPPIIHRDVKSSNILLDREFQARIADFGLAKMLARQGEPHTLSGIAGSFGYIAPEYAYRTKVNEKIDVYSFGVVLLELTTGREPNCGDEHTSLAEWAWQQYNERKPIIDAFDEEITSPCYLEEMTTLFKLGLICTSTLPEIRPSMKEVLHVLRQCSPSEDCDGRKIAGELNAVPVLGTPI 1037
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2218238 2226543 - MC08g0292 Mch8g0317 693938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0317 1037 ProSiteProfiles Protein kinase domain profile. 725 1010 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0317 1037 ProSitePatterns Protein kinases ATP-binding region signature. 731 754 IPR017441 GO:0005524(InterPro)
Mch8g0317 1037 Gene3D Phosphorylase Kinase; domain 1 696 804 - -
Mch8g0317 1037 Gene3D Ribonuclease Inhibitor 422 672 IPR032675 -
Mch8g0317 1037 Pfam Leucine rich repeat 554 596 IPR001611 GO:0005515(InterPro)
Mch8g0317 1037 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 317 414 - -
Mch8g0317 1037 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 65 221 - -
Mch8g0317 1037 SMART LRR_typ_2 345 368 IPR003591 -
Mch8g0317 1037 SMART LRR_typ_2 535 559 IPR003591 -
Mch8g0317 1037 SMART LRR_typ_2 583 607 IPR003591 -
Mch8g0317 1037 SMART LRR_typ_2 274 298 IPR003591 -
Mch8g0317 1037 SMART LRR_typ_2 224 250 IPR003591 -
Mch8g0317 1037 SMART LRR_typ_2 128 152 IPR003591 -
Mch8g0317 1037 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 61 1012 IPR050647 -
Mch8g0317 1037 SUPERFAMILY L domain-like 363 647 - -
Mch8g0317 1037 Pfam Leucine rich repeat N-terminal domain 67 102 IPR013210 -
Mch8g0317 1037 Pfam Leucine Rich Repeat 609 630 IPR001611 GO:0005515(InterPro)
Mch8g0317 1037 Pfam Leucine Rich Repeat 276 298 IPR001611 GO:0005515(InterPro)
Mch8g0317 1037 Pfam Leucine Rich Repeat 154 173 IPR001611 GO:0005515(InterPro)
Mch8g0317 1037 Pfam Leucine Rich Repeat 395 416 IPR001611 GO:0005515(InterPro)
Mch8g0317 1037 Pfam Leucine Rich Repeat 347 367 IPR001611 GO:0005515(InterPro)
Mch8g0317 1037 Pfam Leucine Rich Repeat 130 152 IPR001611 GO:0005515(InterPro)
Mch8g0317 1037 Pfam Leucine Rich Repeat 323 345 IPR001611 GO:0005515(InterPro)
Mch8g0317 1037 Pfam Leucine Rich Repeat 444 462 IPR001611 GO:0005515(InterPro)
Mch8g0317 1037 Gene3D Ribonuclease Inhibitor 67 174 IPR032675 -
Mch8g0317 1037 Gene3D Transferase(Phosphotransferase) domain 1 805 1025 - -
Mch8g0317 1037 SMART serkin_6 725 1009 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0317 1037 FunFam Kinase family with leucine-rich repeat domain-containing protein 805 1025 - -
Mch8g0317 1037 Gene3D Ribonuclease Inhibitor 175 240 IPR032675 -
Mch8g0317 1037 SUPERFAMILY L domain-like 73 415 - -
Mch8g0317 1037 Gene3D Ribonuclease Inhibitor 241 421 IPR032675 -
Mch8g0317 1037 ProSitePatterns Serine/Threonine protein kinases active-site signature. 861 873 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g0317 1037 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 222 315 - -
Mch8g0317 1037 FunFam Receptor-like protein kinase HSL1 705 804 - -
Mch8g0317 1037 Pfam Protein kinase domain 727 1007 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0317 1037 FunFam Leucine-rich receptor-like protein kinase family protein 415 656 - -
Mch8g0317 1037 SUPERFAMILY Protein kinase-like (PK-like) 718 1009 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0858 Mch-Chr6:5960452 Mch8g0317 Mch-Chr8:2218238 3.26E-144 dispersed
Mch7g0882 Mch-Chr7:13388969 Mch8g0317 Mch-Chr8:2218238 6.10E-65 dispersed
Mch8g0305 Mch-Chr8:2136812 Mch8g0317 Mch-Chr8:2218238 1.13E-68 dispersed
Mch8g0317 Mch-Chr8:2218238 Mch7g0889 Mch-Chr7:13444948 1.42E-60 dispersed
Mch8g0317 Mch-Chr8:2218238 Mch4g0284 Mch-Chr4:1818025 1.07E-85 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77571 PF00069 Pkinase 7.90E-44 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0317 - - - 0.0