Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0371 CTGGCCTCTCTCCCGAGTCTCAGGACTCTGAGCTTCATGAACAACAGGCTGGGGGGCCCACTGCCGGACGTGAAGAAAATTGGGGCCCTGAAAGCGCTGTATCTGTCGAACAATAATTTCTCCGGCACGATTTCCGGCGACGCCTTCGAGGGGATGGGGTCCCTGCGGAAGGTGTATCTCAGCCAGAATCGATTTTCCGGCAAGATTCCGACGTCGTTGGCGGAATTAAAGGGGTTGGTGGAGCTGGGATTGGAGGAGAATGAATTTAGTGGAAGAATTCCGGATTTTGAAGAGAGGGATTGGAAGTATTTGAATCTTTCGGATAATCAATTGGAGGGGCCGCTTCCTTCTGCCTTCAAGAACTCCAACTTCACTTCATTTCTTGGAAACAGCGGTTTATGTGGGGAGCCACTGGCACCATGCAATAATAAATCTTCCGCAAAGAAGTGGTACATTCTGATCGGAGTATTCTCCGGCGCCGCCGCCTTGATCCTCCTCCTCCTCATCATCCGCCGCTTTCTCCGGTCGTCCAAATCATCCGCCGCCGTATTCGACGACCCAAAGCCCAAAACCAAATTATTCTCTCCCAAAAACATCTTCAAAAAGGAGAGGTCCCACTCCCACCCATATTCCTCGACCGACTCGGACGAGAACCCGAAGAATGGCGGTCCGACCGGGTATCGGAAGTACTCGATCGAGGAGATTGAAGCTGCAACGGAGTTCTTTTCTGAATCTTTAAAGATTGGAGAGGGAGGTTATGGGCCCGTCTACAAGGGTTATTTAGACCACACACCAGTCGCGATTAAGGTCCTACGACCCGATGCTGCTCAAGGAAGGTCACAGTTTCAACAAGAGGTTGAAGTACTGAGCTGCATACGACATCCTAACATGGTTCTTCTCCTCGGGGCGTGCCCGGAATATGGTTGCTTGGTCTATGAGTTCATGGCGAATGGTAGCTTGGATGACTGCCTCTTTCACCGGAGAGAAAACTTGAAACCTCTTTCGTGGCAACTTAGATTCAAAATTGCAGCTGAAATTGGGACAAGCTTGTTGTTCCTCCACCAAACCAAGCCTGAGCCACTCGTGCACCGTGATCTTAAACCCGCAAATATCTTGCTTGATCGCAACTTTGTTAGCAAGATTAGTGATGTTGGTTTGGCCAGGCTTGTTCCCCCTTCTGTAGCAGACAGTGTAACACAATACAGAATGACTTCAACTGCTGGCACGTTCTGCTATATCGATCCCGAGTATCAACAGACTGGAATGCTCGGGGTGAAGTCCGACATATATTCTTTGGGGATCATGTTTTTGCAGCTGATTACAGCAAAGCCACCAATGGGATTGACTCATCATGTGGAAAGAGCTATTGAGAAAGGAAAGTTCTCTGAATTGCTTGATCAGTCAGTTACTGATTGGCCAGCTGAAGAGACTCTATGCTTTGCACAATTGGCTTTGAAATGTGCAGAGTTGAGAAGGAAAGATCGGCCCGATCTTAGAAAGGTCATTCTACCGGAACTCATCAGGTTTCGATCGCTTGCCGAAGCCAACACGTCCCCGCCGATGGCAGATGGTGTTACCAGCCCTGTGTTCAGCCGCAGTCAGGTTTCAGCTTTCAAGCAAGACTTAAGCGGTGATCGTGTTTCGTCACAATCTTCCAACGGCTCCAACCGAGCCTTGTCGCGCTCGCCATCGTAG 1695 49.73 LASLPSLRTLSFMNNRLGGPLPDVKKIGALKALYLSNNNFSGTISGDAFEGMGSLRKVYLSQNRFSGKIPTSLAELKGLVELGLEENEFSGRIPDFEERDWKYLNLSDNQLEGPLPSAFKNSNFTSFLGNSGLCGEPLAPCNNKSSAKKWYILIGVFSGAAALILLLLIIRRFLRSSKSSAAVFDDPKPKTKLFSPKNIFKKERSHSHPYSSTDSDENPKNGGPTGYRKYSIEEIEAATEFFSESLKIGEGGYGPVYKGYLDHTPVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMANGSLDDCLFHRRENLKPLSWQLRFKIAAEIGTSLLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITAKPPMGLTHHVERAIEKGKFSELLDQSVTDWPAEETLCFAQLALKCAELRRKDRPDLRKVILPELIRFRSLAEANTSPPMADGVTSPVFSRSQVSAFKQDLSGDRVSSQSSNGSNRALSRSPS 564
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2645048 2667190 + MC08g0339 Mch8g0371 693992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0371 564 MobiDBLite consensus disorder prediction 203 226 - -
Mch8g0371 564 SUPERFAMILY L domain-like 2 126 - -
Mch8g0371 564 ProSiteProfiles Protein kinase domain profile. 242 507 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0371 564 Pfam Leucine Rich Repeat 102 121 IPR001611 GO:0005515(InterPro)
Mch8g0371 564 Gene3D Ribonuclease Inhibitor 1 150 IPR032675 -
Mch8g0371 564 Gene3D Phosphorylase Kinase; domain 1 224 314 - -
Mch8g0371 564 Pfam Protein kinase domain 245 501 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0371 564 Pfam Leucine rich repeat 30 88 IPR001611 GO:0005515(InterPro)
Mch8g0371 564 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 93 - -
Mch8g0371 564 Gene3D Transferase(Phosphotransferase) domain 1 315 516 - -
Mch8g0371 564 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 217 314 - -
Mch8g0371 564 SUPERFAMILY Protein kinase-like (PK-like) 222 502 IPR011009 -
Mch8g0371 564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 361 373 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g0371 564 MobiDBLite consensus disorder prediction 540 564 - -
Mch8g0371 564 PANTHER OS02G0152300 PROTEIN 220 552 IPR051348 -
Mch8g0371 564 SMART serkin_6 242 507 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g0371 Mch-Chr8:2645048 Mch8g2590 Mch-Chr8:29058551 6.98E-161 dispersed
Mch11g0638 Mch-Chr11:4126323 Mch8g0371 Mch-Chr8:2645048 1.79E-177 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77574 PF00069 Pkinase 6.20E-39 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0371 - - - 0.0