Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0375 ATGTCGGTTGATGGGAAGGGGAAGAAGAACAATATCGAGAATTTGGTGTCTGCTACAAGATCACTGAAGATTAGCTTAGACAAATCCAGGGCTCTAGGGTTGGCGTTGCAGAAAGCGGGGCTCAGATTGGAGGAGATTAAACAAAGATTGCCCACTTTGGAAGCTGCTGTGCGACCAATTCGTGCCGATAAGGAAGCCCTCGTCGCCGTCGGCGGCCATATTAATCGGGCGGTGGGCCCTGCGGCGGCGGTGCTCAAGGTTTTCGATGCTGTTCATGGGCTTGAGAAGTCTCTGTTATCGGACCCGCGCAACGATCTCCCTGGTTATTTGTCGGTGCTGAAGCGGATGGAAGAGGCATTGAGATTCTTGGGAGATAACTGTGGGCTCGCAATCCAGTGGCTGGAGGACATTGTTGAGTATTTGGAAGACAATACGGTTGCTGATGAGCGATTTCTTGCGAGTTTGAAGAAGTCGCTGAAGAATCTGAGGGATTTGCAGAGCGATGAGGAGAGGACCCGGCTTGATGGAGGGCTTCTCAATGCTGCTTTGGATAAACTAGAGAACGAGTTTAGGCGTCTTCTAATGGAGCACAGCGTGCCCCTCCCCATGGCAGCGTCCTCCGCGTCTCTGGGTGAGCAAGCTTGCATTGCCCCATCTCCATTGCCTGTAACTGTTATTCAGAAATTGCAAGCCATCCTAGGGAGATTGATTGCTAATAAAAGACTTGAGAGATGCATATCCATTTATGTTGAAGTTCGTAGTTCGAACGTTCGGGCTAGTTTGCAGGCGCTCGATTTGGATTACTTGGAGATATCGGTTTCTGAATTCAATGATGTGCAGAGCATTGAGGGGTACATTGCAAAATGGGGAAGGCATTTGGAGTTTGCAGTGAAGCACTTGTTTGAGGCAGAGTTCAAGCTTTGTAATGATGTTTTTGAGAGGATAGGATTGGATGTGTGGATGGGCTGTTTTGCAAAGATAGCAACTCAAGCAGGTATTCTTGCATTTCTTCAATTTGGGAAAACTGTAACAGAGAGCAAGAACGACCCAATTAAGCTATTGAAGTTGTTAGATATATTTGCATCCTTGAACAAACTGAGACTGGACTTCAATAGGCTTTTCGGGGGAGCTGCGTGTTCGGAGATTCAAAACCTGACAAGGGATCTCATTAAGCGGGTTATTGATGGTGCGGCCGAGATTTTCTGGGAACTTTTAGTTCAGGTGGAGTTACAGAGGCGAAATTCTCCACCTTCAGATGGGGCAGTTCCTAGGTTGGTCAGCTTCATTATTGATTACTGTCATAAACTGCTGAGCGACGATTATCGACCAATCCTGATCCAGGCCCTGGTCATTCACCGGAGTTGGAAAAAAGAAAAGTTCCAAGAGGGTCTTCTTGTCAGTGAGATTTTGAACCTCGTTAAAGCCATTGAGCTGAATTTGGAAACCTGGATAAAGGCTTATGAAGATCCTATCTTGTCAAATTTTTTTGCGATGAACAATCATTGGCATCTATTTAAGCACCTCAAAGGAACGAAATTGGGGGAGCTACTCGAACTACGGGAACTAGGTAGAGATCCTGTAAAGGAACATGAACAGTACAAGGATTACCATGGCGCAGTTTTCTTGAGGGATAGCTGGAGTAAACTTCCCAGCCATTTAAGCAGGGAGGGTTTGATTATGTTCTCAGGTGGGCGAGCTACTGCCCGCGATCTTGTGAAGAAACGTTTAAAGACATTCAACGAAGCTTTCGAGGACATGTACAAGAAGCAGTCAAACTGGATTATAACTGACAAAGAATTGAGGGATAAGACATGCCAACAGATAGTTCAAACCGTCGTGCCTGTGTATCGCAGCTATATGCAGAATTATGGCCCCCTGGTCGAGCAAGACGCGAGTTCCAGTAAGTATGCAAAATACACCGTGCAGAATCTGGAGAAAATGTTACTGTCCCTTTTTCAGCCAAAGCCACTTAGGTTCAGCAGCCTTCAAGTTAGGCAGACCAGTGGGAAATTCAGCAATGGCGCAGCAGATCATCGACGATCCAACTCCATGGTTATGTAA 2061 46.48 MSVDGKGKKNNIENLVSATRSLKISLDKSRALGLALQKAGLRLEEIKQRLPTLEAAVRPIRADKEALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLPGYLSVLKRMEEALRFLGDNCGLAIQWLEDIVEYLEDNTVADERFLASLKKSLKNLRDLQSDEERTRLDGGLLNAALDKLENEFRRLLMEHSVPLPMAASSASLGEQACIAPSPLPVTVIQKLQAILGRLIANKRLERCISIYVEVRSSNVRASLQALDLDYLEISVSEFNDVQSIEGYIAKWGRHLEFAVKHLFEAEFKLCNDVFERIGLDVWMGCFAKIATQAGILAFLQFGKTVTESKNDPIKLLKLLDIFASLNKLRLDFNRLFGGAACSEIQNLTRDLIKRVIDGAAEIFWELLVQVELQRRNSPPSDGAVPRLVSFIIDYCHKLLSDDYRPILIQALVIHRSWKKEKFQEGLLVSEILNLVKAIELNLETWIKAYEDPILSNFFAMNNHWHLFKHLKGTKLGELLELRELGRDPVKEHEQYKDYHGAVFLRDSWSKLPSHLSREGLIMFSGGRATARDLVKKRLKTFNEAFEDMYKKQSNWIITDKELRDKTCQQIVQTVVPVYRSYMQNYGPLVEQDASSSKYAKYTVQNLEKMLLSLFQPKPLRFSSLQVRQTSGKFSNGAADHRRSNSMVM 686
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2685495 2688186 + MC08g0343 Mch8g0375 693996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0375 686 Coils Coil 36 56 - -
Mch8g0375 686 Gene3D Exocyst complex component Exo70 134 658 - -
Mch8g0375 686 SUPERFAMILY Cullin repeat-like 84 652 IPR016159 -
Mch8g0375 686 PANTHER EXOCYST COMPLEX PROTEIN EXO70 99 654 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Mch8g0375 686 FunFam Exocyst subunit Exo70 family protein 134 658 - -
Mch8g0375 686 Pfam Exo70 exocyst complex subunit C-terminal 288 649 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Mch8g0375 686 Pfam Exocyst complex component Exo70 N-terminal 79 194 - -
Mch8g0375 686 Coils Coil 152 172 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g0375 Mch-Chr8:2685495 Mch9g0157 Mch-Chr9:1221621 7.48E-208 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0375 K07195 - csv:101207478 1204.12