Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0425 ATGGGGACTCCATTCGAAGGAATAGTAAAAGATTTCAAGGGAAGGGCAGCCTGCTATAAGCAGGATTGGACATGTGCGCTATGTTCAGGCGTCAGGATTTTAGCTCCTACTATGTACATTTTTTTCGCCTCTGCTCTTCCTGTTATTGCCTTCGGAGAGCAACTTAGTAGGGATACAGGTGGAAGCTTGAGCACGGTGGAGACATTAGCCTCAACTGCACTGTGTGGAATCATCCACTCAATCTTTGGGGGACAGCCTTTGCTGATCTTAGGAGTGGCGGAACCTACGGTTATAATGTATACTTATTTGTACACTTTCAGTAAAGGCCGACCAGAGTTAGGAGGCGAGCTCTTTTTAGCCTGGGCTGCATGGGTGTGCGTGTGGTCTGCATTTTTGCTGATCCTCCTTGCAATCTTTAACGCTTGCAACATCATCACCAAATTTACGAGGGTTGCTGGGGAACTTTTTGGCATGCTTATTGCTGTTCTCTTCTTCCAAGAAGCAATCAGGGGATTGATCAGTGAGTTCAGCATTCCCAAGGCAGAAGATCCAGAGTTATTGGAGTTTAAATTTGAATGGTTGTATACAAATGGGTTGCTTGCTATCATCTTTTCCGTTGGTCTACTCTTCACTGCCCTTAAAAGTAGACATGCGAGATCGTGGAAATATGGCACTGGGTGGCTCCGGAGTTTCATTGCAGACTATGGGATTCCGCTTATGGTCGTGGTGTGGACAGCATTGTCTTATGGAGTTCCCAGCAAAGTTCCTCATGGAGTTCCAAGGAGACTCGTTTGTCCATTACCTTGGGAGCCAGCTTCGTTGTACCACTGGACTGTGGTCAAGGACATGGGGAAGGTTCCAGTAATTTATATCTTTGCTGCTTTTCTGCCAGCCTTGATGATAGCAGGCCTATACTTTTTCGACCATAGTGTGGCAGCACAAATGGCACAACAGAAAGAGTTTAATCTTCAAAAACCATCTGCCTACCATTATGATATCTTCTTGCTCGGAATTATGACTTTAATTTGTGGGTTGCTTGGACTACCTCCTTCTAATGGTGTCCTTCCACAGTCCCCAATGCACACCAAGAGTCTTGCAGTGCTCAAACGGCAGCTAATTCGAAAAAAAATGGTAAAGAGAGCAAAGGAATGTATGAAACAAAAAGCGAGCAAGTCTGAAATTTACGGAAAGATGCAGGCTGTGTTCATTGAAATGGACACATCTCCAACTGTAGTGCTCAATCTTGTAGTCTCCCTTTTTTCTTACTCCAAGAATGAGTTATCTCATGCACCTGCACCTTACCTCTTGTTGCAGCCAAAGGAGCTGGAAACCTTGAAGAAGGCAGTGATGAATGGTGACAATGGTGGAGATCAGAAGGGGAAATTCGATCCTGAGAAAAATATCGATGCGTATTTACCTGTTCGTGTTAACGAGCAAAGGATGAGCAACTTGCTGCAGTCCATCCTCGTTGCTGTATCACTTTGCGCTGTCCCTATAATGAAAATGATACCCACTTCAGTTCTTTGGGGATACTTTGCTTACATGGCCATTGATAGTCTTCCAGGAAACCAGTTTTGGGAAAGGCTGTTGTTGCTGTTCATTACGCCAGGCCGGCGTTTCAAGGTCTTGGAGGGCTCTCATTTATCTTTCGTGGAATCGGTGCCATTCAAGAGCATTGCTGTGTTTACCCTGCTTCAGTTGGTATATTTCTTGATATGCTTTGGCGTAACATGGATACCTGTAGCTGGGATCCTGTTCCCACTGCCATTTTTCCTCCTCATTAGCATAAGAGAGCATGTGCTCCCCAAGTTCTTCCATCCTAGCCATCTTCAAGAGCTGGATGCATCAGAGTATGAGGAGACTGCTGGTGCTCCGCATCGCGCCCTGAATCTTACAGAAAAGGAGCCACCTGATACGATTACAGAGGAGAATAATGAAGAATACTATGATGCTGAGATATTAGATGAGATGACAACTCACAGAGGAGAGTTGAAGCTTAGAACTGTAAGTTTCAACGAAGAAAGGCACTTTCAGGTTCATCCTGAAGAATCCCTTCGACCGCAATGA 2067 45.09 MGTPFEGIVKDFKGRAACYKQDWTCALCSGVRILAPTMYIFFASALPVIAFGEQLSRDTGGSLSTVETLASTALCGIIHSIFGGQPLLILGVAEPTVIMYTYLYTFSKGRPELGGELFLAWAAWVCVWSAFLLILLAIFNACNIITKFTRVAGELFGMLIAVLFFQEAIRGLISEFSIPKAEDPELLEFKFEWLYTNGLLAIIFSVGLLFTALKSRHARSWKYGTGWLRSFIADYGIPLMVVVWTALSYGVPSKVPHGVPRRLVCPLPWEPASLYHWTVVKDMGKVPVIYIFAAFLPALMIAGLYFFDHSVAAQMAQQKEFNLQKPSAYHYDIFLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLKRQLIRKKMVKRAKECMKQKASKSEIYGKMQAVFIEMDTSPTVVLNLVVSLFSYSKNELSHAPAPYLLLQPKELETLKKAVMNGDNGGDQKGKFDPEKNIDAYLPVRVNEQRMSNLLQSILVAVSLCAVPIMKMIPTSVLWGYFAYMAIDSLPGNQFWERLLLLFITPGRRFKVLEGSHLSFVESVPFKSIAVFTLLQLVYFLICFGVTWIPVAGILFPLPFFLLISIREHVLPKFFHPSHLQELDASEYEETAGAPHRALNLTEKEPPDTITEENNEEYYDAEILDEMTTHRGELKLRTVSFNEERHFQVHPEESLRPQ 688
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3041196 3045800 + MC08g0381 Mch8g0425 694046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0425 688 Gene3D Helical hairpin bin 15 57 - -
Mch8g0425 688 Pfam HCO3- transporter integral membrane domain 4 177 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Mch8g0425 688 Pfam HCO3- transporter integral membrane domain 474 616 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Mch8g0425 688 Pfam HCO3- transporter integral membrane domain 198 371 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Mch8g0425 688 PANTHER ANION EXCHANGE PROTEIN 3 661 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Mch8g0425 688 MobiDBLite consensus disorder prediction 624 644 - -
Mch8g0425 688 FunFam probable boron transporter 2 15 57 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2601 Mch-Chr6:27853078 Mch8g0425 Mch-Chr8:3041196 1.29e-311 dispersed
Mch8g0425 Mch-Chr8:3041196 Mch8g2109 Mch-Chr8:24148031 4.13E-271 dispersed
Mch8g0425 Mch-Chr8:3041196 Mch8g1149 Mch-Chr8:8182561 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0425 K24194 - csv:101220188 1154.81