Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0457 ATGGATCCGAGGTTTGGTGGTGTCCCTTACACATTCTTCAAACAAAGAGGGGGTTGCAGAGTTTCTCTTTACCAGGATGCTCATGTTCTGAACAACTTCCTTCCTCGTGTTGGTCTGTCGGGAGGGAATTATCATGAAATAAACAGGTGTTGGGAGGACATTTTTGATGCGATCAACAATGCAAGACACATAATTTACATAGCTGGTTGGTCTGTGTACACCGAAATAACGTTGATAAGAGACCGAGAAAGAAGAAATACGGGAGACGACATTACTCTCGGGAAACTGCTAAAGAAGAAGGCAGAGGAAGGTGTGACTGTGTTGCTTCTTGTTTGGGACGACATAACTTCCTCTGAAGATTTCAAAAGAGAAGGTTTGATGGCAACTCACGATGAGGAAACTGCAGAATACTTCAGGGACTCAAAGGTACACTGTGTTCTGTGTCCAAGGAATCCTGATGTGGGAAAAAGCTTAGTTCAGGGCTTTGAGACAGCCACCATGTTTACCCACCACCAAAAGACAATTGTGCTTGACAGTGATATAGCTGGTGGAAGAACGGATAAAAGGAGAATTGTGAGTTTTGTTGGTGGTATTGATCTGTGTGATGGGAGATACGATACACCAAAACACCCTTTATTTTCAACTCTAGATTCAATCCACTATAGTGATTTCCATCAGCCCAACTTTACAGGCTCTTCAATCAGGAAAGGAGGTCCAAGGGAACCATGGCATGATATCCATTGCCGCCTAGAAGGGCCTGTTGCTTGGGATGTCCTATACAATTTTGAGCAAAGATGGCAAAAGCAAGTTGGAAACAACTTTCTGATTCCAATGCAAAAGCTTGAAGAAACCATTACCCGTCCATTAATGGTTTTACCGTCAGACGACAACGACACATGGAATGTTCAAATATTTCGATCCATCGATGGCGGTGCAGTTAAGGGCTTTCCAGATATACCTGGAGAAGCAGATAAAGTAGGCCTTGTAAGTGGGAAGAATAATATTATAGATAGGAGCATTCAAGATGCTTATATCAATGCTATTCGCAGAGCAAAGGACTTCATATACATTGAGAATCAATATTTCCTTGGAAGTTCTTATGGTTGGAAATCAAATGTTATAAGGGTAGAAGAAATCAATGCCCTGCATCTTATTCCGAAGGAGATCTCACTTAAGATTGTGAGCAAGATTGAAGGTGGAGAAAGGTTTACAGCATATATTGTGATTCCAATGTGGCCAGAAGGTATTCCAGAGAGCGCATCAGTTCAAGCAATTCTAGATTGGCAAAGGAGAACCATGGAGATGATGTACACAGACATAACTCAAGCCCTTCGAAAGAAGGGTCTGGATGCAAATCCCAGAGACTACCTGACATTCTTCTGCCTCGGCAACCGAGAGAAGAAGAGGACCGGAGAACATGTTCCACCAGAGAAACCGGAGCCCAACTCCGACTACGCTAGGGCTCAAGAGTTCAGACGCTTTATGATCTATGTTCATTCAAAAATGATGATAGTTGACGATGAATACATAATTATTGGGTCTGCGAACATCAACCAGAGGTCAATGGATGGAGGAAGAGACTCTGAGATTGCAATGGGGGCGTTTCAGCCTCATCACTTGGCCGGCGGGGAGGCTGCAAGAGGTCAAATCTATGGCTTCCGAGTGGGTCTCTGGTACGAGCATCTTGGCTTGTTTGACAAAGTATTCCAAAACCCAGAGGGTGAAAACTGCGTCCAGTTCGTGAACAAGCTCGCTCAAGAAAACTGGCAACTTTACACGGACGATACCTTCGACGGGGATCTTCCTGGTCATCTTCTTCGGTACCCCATTGAAGTTGGCCCTGACGGGTCAGTTTCGCCGCTGCCGGCATTTGAATTTTTCCCTGACACGAAGGCTCGTGTTCTTGGCCAACTGGCCGATTATCTACCCGCAATCCTTACCACTTGA 1947 44.63 MDPRFGGVPYTFFKQRGGCRVSLYQDAHVLNNFLPRVGLSGGNYHEINRCWEDIFDAINNARHIIYIAGWSVYTEITLIRDRERRNTGDDITLGKLLKKKAEEGVTVLLLVWDDITSSEDFKREGLMATHDEETAEYFRDSKVHCVLCPRNPDVGKSLVQGFETATMFTHHQKTIVLDSDIAGGRTDKRRIVSFVGGIDLCDGRYDTPKHPLFSTLDSIHYSDFHQPNFTGSSIRKGGPREPWHDIHCRLEGPVAWDVLYNFEQRWQKQVGNNFLIPMQKLEETITRPLMVLPSDDNDTWNVQIFRSIDGGAVKGFPDIPGEADKVGLVSGKNNIIDRSIQDAYINAIRRAKDFIYIENQYFLGSSYGWKSNVIRVEEINALHLIPKEISLKIVSKIEGGERFTAYIVIPMWPEGIPESASVQAILDWQRRTMEMMYTDITQALRKKGLDANPRDYLTFFCLGNREKKRTGEHVPPEKPEPNSDYARAQEFRRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDSEIAMGAFQPHHLAGGEAARGQIYGFRVGLWYEHLGLFDKVFQNPEGENCVQFVNKLAQENWQLYTDDTFDGDLPGHLLRYPIEVGPDGSVSPLPAFEFFPDTKARVLGQLADYLPAILTT 648
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3252667 3255638 + MC08g_new0057 Mch8g0457 694078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0457 648 Gene3D Endonuclease Chain A 322 538 - -
Mch8g0457 648 SMART pld_4 494 521 IPR001736 GO:0003824(InterPro)
Mch8g0457 648 SMART pld_4 166 204 IPR001736 GO:0003824(InterPro)
Mch8g0457 648 SUPERFAMILY Phospholipase D/nuclease 340 565 - -
Mch8g0457 648 FunFam Phospholipase D delta 41 285 - -
Mch8g0457 648 Gene3D Endonuclease Chain A 40 288 - -
Mch8g0457 648 PANTHER PHOSPHOLIPASE D 5 635 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Mch8g0457 648 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 166 204 IPR001736 GO:0003824(InterPro)
Mch8g0457 648 Pfam Phospholipase D Active site motif 496 521 IPR001736 GO:0003824(InterPro)
Mch8g0457 648 FunFam Phospholipase D 307 540 - -
Mch8g0457 648 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 494 521 IPR001736 GO:0003824(InterPro)
Mch8g0457 648 SUPERFAMILY Phospholipase D/nuclease 5 276 - -
Mch8g0457 648 Pfam Phospholipase D C terminal 566 637 IPR024632 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g0457 Mch-Chr8:3252667 Mch8g0878 Mch-Chr8:6261288 1.10E-214 dispersed
Mch8g0457 Mch-Chr8:3252667 Mch8g1128 Mch-Chr8:8063013 0 wgd
Mch8g0457 Mch-Chr8:3252667 Mch9g0416 Mch-Chr9:3077031 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0457 K01115 - csv:101207900 1184.86