Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0537 ATGAGCCTACGCAAGGGCTCTAAAGTCTGGGTGGAAGACAGAGATTTTGCTTGGGTAGCAGCTGAAGTCCTCGACTTCGTTGGTAAGCAAGTGCGAGTTGCAACTGTTAATGCAAAGAAGGTCTTGGCTCTTCCCGAGAAGCTATTGCCGAGGGACGCGGACGAGGACGACCATGGAGGGGTGGACGACATGACGAAGTTGACCTATTTGAATGAGCCTGGGGTGCTTTACAATCTTCAAAGAAGATATTCTCTCAATGACATATATACATATACCGGTAGCATTTTGATTGCTGTTAATCCGTTCACAAAGCTTCCCCATCTATACAATGTACACATGATGGAGCAATATAAGGGAGCACCTTTTGGGGAATTGAGCCCTCATGTATTTGCGGTTGCTGATGCATCATATAGAGCAATGATTAGTGAGGGTAGAAGCCAGTCTATATTGGTCAGTGGAGAGAGTGGGGCAGGGAAAACTGAGACAACAAAATTGATTATGCAATATCTTACGTTTGTCGGAGGTCGAGCTTCAGGCAATGACAGAACCGTTGAGCAACAAGTTCTTGAATCAAATCCTTTACTGGAAGCATTTGGTAACGCAAGGACGGTAAGAAATGATAATTCAAGTCGTTTTGGGAAGTTTGTTGAGATCCAGTTTGATGCAAATGGTAGAATATCAGGTGCTGCAATCAGAACTTATCTTCTGGAACGTTCTCGTGTAGTACAAATCACGAACCCCGAGAGGAACTATCACTGTTTTTATCAGCTATGTGCATCTGGAAGGGATGCAGAGAAGTACAAGTTAGACCACCCAAGTCATTTTCGGTACTTAAATCAAAGCAAGACCTATGAATTAGATGGCGTGAGCAATGCTGAGGAGTATATTAGGACAAGGAGGGCAATGAATATAGTTGGTATCAGTCACGAGGATCAGGAAGCTATCTTTCGTACCTTGGCTGCAATTTTGCATCTGGGGAACATTGAGTTTTCTCCTGGAAAAGAATACGACTCTTCAGTCTTGAAGGATGAAAAGTCTACCTTTCATATAGGGATGGCTTCTAATCTTCTCATGTGTGATTCCAACCTCTTGGTCACAGCCCTTTGTACTCGTTCGATTCAAACTCGTGAAGGAATTATTGTTAAAGCTCTAGACTGTGATGGTGCCATTGCTAGCCGGGATGCATTGGCAAAGACTGTTTATGCTCGTCTGTTTGATTGGCTTGTTGATAAGATTAATCGGTCTGTTGGGCAAGATTCGAATTCTCAATTTCAAATTGGGTTATTGGACATTTATGGTTTTGAATGCTTTAAGGACAATAGTTTTGAACAGTTCTGCATCAATTTTGCAAATGAAAAGCTCCAGCAACATTTTAATGAGCATGTATTTAAGATGGAGCAGGAGGAGTATAGCAAAGAGGAAATAAATTGGAGCTACATTGAATTCATTGACAACCAGGATGTGTTGGATTTGATTGAGAAGAAACCTATTGGAATCATTGGTTTGCTGGATGAGGCTTGTATGTTCCCAAGATCAACCCATGAAACATTCTCAACCAAATTATTTCAGAATTTCCGTACACATCCACGGTTGGAAAAAACAAAGTTTTCAGAAACAGATTTTACCCTTTCCCATTATGCTGGAAAGGTCACTTATCATACAGATACCTTTTTAGATAAAAATCGTGATTATGTTGTCGTAGAGCATTGCAATCTGTTGGCTTCTTCTAGATGCAGTTTTGTTGCTGGCCTTTTCTCTTCCTTACCAGAGGAATCTTCAAGATCATCTTATAAATTTTCTTCTGTCGCTTCAAGATTTAAGCAACAACTTCAAGCCCTCATGGAGACACTGAACTCAACTGAGCCCCATTATGTGCGCTGTGTGAAGCCAAACTCTCTTAATAAGCCCCAGAAGTTTGAGAATCTAAGCATTCTGCACCAATTACGTTGTGGGGGTGTTTTGGAGGCTGTTCGAATAAGTCTTGCAGGTTATCCCACCAGAAGAACTTATGCAGAGTTTATAGACCGTTTTGGTTTGTTGGTTCCTGATTTATTGGATGGAAGCTATGAAGAAAGATCGATTACAGAGAAGATTTTACAAAAGTTGAGTCTAAAAAATTTTCAGTTGGGTAGGACCAAAGTATTTCTTAGGGCTGGTCAAATTGGCATTCTGGATGCTCGAAGAGCTGAAGTGTTGGATAGTGCTGCAAAGTGTATTCAACGTCGATTACAAACATATCATGCACGCAAGGATTTTCTATTGATACGCTCTACTGCAATTGCACTCCAAGCATATTGCAGAGGATGCCTTGCCCAAAGGTTTTATGTAGCAAAACGAGAAAGCGCTGCTGCTACTACAATTCAAAAATATTTACGCAGGTGTTCCTTGAGGAATACCTACCTGGAACTCTATTCAGCTACTCTGACCATACAGTCCAATATTCGTGGTTTTGCTACTCGCAATAGGTTTTTGCATGATAGAAGAAACAAAGCTGCAGTATTAATTCAGGCTCGATGGAGGACATTCAAGGTTCGTGCTGTTTTCCAGCGCCACCAAGCTTATATTATTGCAATACAATGTCGATGGAGGCAAAAGCTTGCAAAAAGGGAACTTCGAAGACTTAAACAAGAGGCTAATGAAGCTGGAGCATTGCGTTTAGCTAAGAACAAACTTGAGAAGCAGTTGGAAGATCTTACATGGCGGTTGCATTTGGAAAAAAGATTACGGGCTTCCAATGAAGAGGCTAAGTCTAGCGAAATGTTAAAATTGCAAAAGATGCTAGAATCGTTGAGGCTGGAGTTGGATTCAGCTAAATTGGCTGCAATCAATGAGTGCAACAAAAATGCTGTGCTGCAGAATCAAGTGGAATTATTGGCAAAGGAGAAGTATGCTTTTGAAAGAGACAGTGTAGCAGTGGCTGAACTAAAAAAAGAAAATGCTTTCCTAAAAAGTGCTATGGATGCCCTGGAGAAAAAGAACTCAGCTCTGGAGGTTCAGTTTGTTGAGGCACAAAAGGATGGTAGCAACACAAATGAAAAGTTGCAGGAGGTTGAACAGGAATGCGTTAAGCTTCAACAGAATGTGAAAAGTCTTGAAGAGAAACTCTCAGTTTTAGAGGACGAGAATCATGTCCTGCGACAGAAAGCCTTAAGTGCAACTCCAAGGAGCAACCGAGCCGGTTTTGTAAGGGCATTATCGGAGAAATCCTCTGGTGCGCTTGTCCCTCATGTTGATAGGAAAGCTATATTTGAGTCACCAACACCTACAAAACTGGTTGCTCCTTTTTCACAAGGCCTTTCTGAATCACGGCGACCAAAATTAACCGTAGAGAGGCACCAGGAAAACTATGAAGTCCTTTCTAGGTGTATTAAAGAAGATTTGGGGTTTAAAGGTGACAAGCCACTGGCTGCTTGCATCATCTACAAATGCCTTCTTAAGTGGCATGCGTTCGAATCAGAACGAACAGTTATTTTTGACTACATAATTGAAGGAATCAACGATGCTCTCAAGGCGGGGGATGAGAACGTTACCTTGCCATATTGGTTGTCAAACGCCTCTGCATTACTATGCCTTCTACAAAGGAATTTAAAGTCAAATGGTTTTTTGAGCACAGCTACTCAGCGTTCCTCAGGTTCTACTGGCTTAGCTAGCAGGATTACTCAGGGACTCAAATCACCCTTCAAATATATTGGGTTTGAAGATGGGATTTCTCATCTTGAAGCAAGGTATCCAGCAATATTGTTTAAACAGCAACTAACTGCTTGTGTGGAGAAGATTTTTGGCTTGATCCGTGATAACTTGAAGAAAGAATTATCTCCATTGTTGAGTTCATGTATTCAGGCACCTAAAGCTGCACGAGTACATGCTGGGAAGTCCTCTCGATCGCCTGGTGTTCCTCAATTGTCTACAAGTAGTCCATGGGATAACATTATAAAGTTTTTGGATTCTTTGATGAGCCAATTACATGAAAATCATGTACCATCTTTCTTCATTCGTAAATTGATTACTCAGGTGTTCTCGTTCATCAATATTTCACTTTTTAATAGCCTTCTTCTGCGACGTGAATGTTGTACATTTTCAAATGGTGAGTATGTGAAATCTGGTCTTGCAGAACTAGAGAAGTGGATTGGCAATGCAACAGATGAGTATTCAGGGACCTCTTGGCATGAGCTAAACTATATAAGGCAAGCTGTCGGGTTTCTGGTAATACATCAGAAGAGAAAGAAATCACTAGAAGAGATACGACAGGATCTTTGCCCTGCATTGACAGTGAGACAAATTTATCGTATTAGTACCATGTATTGGGATGACAAATATGGCACTCAGAGTGTGTCAAATGAGGCAAGTGTCGCTCAAATGAGGGAAATTCTGAACAAGGATAATCAGAACTTAACCTCAAATTCATTTTTGTTGGATGATGATCTAAGCATCCCATTCTCTACTGAAGACATAGATATGGCCCTTCCCGCAATTGAACCTTCAGACATTGAACTTCCCACTTTCTTGTCAGAATATCCCTGTGCTCAATTTCTGGTCGAGCATCAAAAGTAG 4551 41.16 MSLRKGSKVWVEDRDFAWVAAEVLDFVGKQVRVATVNAKKVLALPEKLLPRDADEDDHGGVDDMTKLTYLNEPGVLYNLQRRYSLNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGELSPHVFAVADASYRAMISEGRSQSILVSGESGAGKTETTKLIMQYLTFVGGRASGNDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDANGRISGAAIRTYLLERSRVVQITNPERNYHCFYQLCASGRDAEKYKLDHPSHFRYLNQSKTYELDGVSNAEEYIRTRRAMNIVGISHEDQEAIFRTLAAILHLGNIEFSPGKEYDSSVLKDEKSTFHIGMASNLLMCDSNLLVTALCTRSIQTREGIIVKALDCDGAIASRDALAKTVYARLFDWLVDKINRSVGQDSNSQFQIGLLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIIGLLDEACMFPRSTHETFSTKLFQNFRTHPRLEKTKFSETDFTLSHYAGKVTYHTDTFLDKNRDYVVVEHCNLLASSRCSFVAGLFSSLPEESSRSSYKFSSVASRFKQQLQALMETLNSTEPHYVRCVKPNSLNKPQKFENLSILHQLRCGGVLEAVRISLAGYPTRRTYAEFIDRFGLLVPDLLDGSYEERSITEKILQKLSLKNFQLGRTKVFLRAGQIGILDARRAEVLDSAAKCIQRRLQTYHARKDFLLIRSTAIALQAYCRGCLAQRFYVAKRESAAATTIQKYLRRCSLRNTYLELYSATLTIQSNIRGFATRNRFLHDRRNKAAVLIQARWRTFKVRAVFQRHQAYIIAIQCRWRQKLAKRELRRLKQEANEAGALRLAKNKLEKQLEDLTWRLHLEKRLRASNEEAKSSEMLKLQKMLESLRLELDSAKLAAINECNKNAVLQNQVELLAKEKYAFERDSVAVAELKKENAFLKSAMDALEKKNSALEVQFVEAQKDGSNTNEKLQEVEQECVKLQQNVKSLEEKLSVLEDENHVLRQKALSATPRSNRAGFVRALSEKSSGALVPHVDRKAIFESPTPTKLVAPFSQGLSESRRPKLTVERHQENYEVLSRCIKEDLGFKGDKPLAACIIYKCLLKWHAFESERTVIFDYIIEGINDALKAGDENVTLPYWLSNASALLCLLQRNLKSNGFLSTATQRSSGSTGLASRITQGLKSPFKYIGFEDGISHLEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLSSCIQAPKAARVHAGKSSRSPGVPQLSTSSPWDNIIKFLDSLMSQLHENHVPSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNGEYVKSGLAELEKWIGNATDEYSGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEASVAQMREILNKDNQNLTSNSFLLDDDLSIPFSTEDIDMALPAIEPSDIELPTFLSEYPCAQFLVEHQK 1516
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 3841348 3869346 - MC08g0472 Mch8g0537 694158
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0537 1516 SMART DIL_2 1333 1440 IPR002710 -
Mch8g0537 1516 CDD MyosinXI_CBD 1110 1482 IPR037975 GO:0007015(InterPro)
Mch8g0537 1516 SMART MYSc_2a 53 730 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch8g0537 1516 PANTHER MYOSIN 9 828 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
Mch8g0537 1516 ProSiteProfiles Myosin motor domain profile. 59 729 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch8g0537 1516 Gene3D Kinesin motor domain 62 659 IPR036961 -
Mch8g0537 1516 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 779 IPR027417 -
Mch8g0537 1516 Coils Coil 972 1048 - -
Mch8g0537 1516 Gene3D - 435 620 - -
Mch8g0537 1516 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 781 878 IPR027417 -
Mch8g0537 1516 Gene3D Myosin VI head, motor domain, U50 subdomain 308 598 - -
Mch8g0537 1516 Coils Coil 864 908 - -
Mch8g0537 1516 ProSiteProfiles IQ motif profile. 755 784 - -
Mch8g0537 1516 PRINTS Myosin heavy chain signature 146 171 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch8g0537 1516 PRINTS Myosin heavy chain signature 193 220 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch8g0537 1516 PRINTS Myosin heavy chain signature 425 453 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch8g0537 1516 PRINTS Myosin heavy chain signature 478 506 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch8g0537 1516 PRINTS Myosin heavy chain signature 89 108 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch8g0537 1516 ProSiteProfiles IQ motif profile. 851 880 - -
Mch8g0537 1516 Coils Coil 920 940 - -
Mch8g0537 1516 ProSiteProfiles IQ motif profile. 828 857 - -
Mch8g0537 1516 Pfam IQ calmodulin-binding motif 805 823 IPR000048 GO:0005515(InterPro)
Mch8g0537 1516 Pfam IQ calmodulin-binding motif 830 848 IPR000048 GO:0005515(InterPro)
Mch8g0537 1516 FunFam Myosin heavy chain 249 303 - -
Mch8g0537 1516 ProSiteProfiles Dilute domain profile. 1159 1459 IPR002710 -
Mch8g0537 1516 ProSiteProfiles IQ motif profile. 803 832 - -
Mch8g0537 1516 Gene3D - 249 306 - -
Mch8g0537 1516 CDD MYSc_Myo11 73 717 IPR036018 -
Mch8g0537 1516 Pfam Myosin head (motor domain) 61 717 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Mch8g0537 1516 SMART iq_5 731 753 IPR000048 GO:0005515(InterPro)
Mch8g0537 1516 SMART iq_5 754 776 IPR000048 GO:0005515(InterPro)
Mch8g0537 1516 SMART iq_5 779 801 IPR000048 GO:0005515(InterPro)
Mch8g0537 1516 SMART iq_5 827 849 IPR000048 GO:0005515(InterPro)
Mch8g0537 1516 SMART iq_5 802 824 IPR000048 GO:0005515(InterPro)
Mch8g0537 1516 Pfam DIL domain 1334 1437 IPR002710 -
Mch8g0537 1516 Gene3D - 731 780 - -
Mch8g0537 1516 Gene3D - 829 879 - -
Mch8g0537 1516 Gene3D - 781 828 - -
Mch8g0537 1516 Gene3D - 663 730 - -
Mch8g0537 1516 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 53 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g0537 Mch-Chr8:3841348 Mch8g2972 Mch-Chr8:32397966 0 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0537 K10357 - csv:101210527 2804.24