Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0558 ATGTCTCCGTCGTATCCACCTGAAGATGGGATTCCGTTAAACACCACGGCGGTGGCCATTGACAAGGATAAGAACAGTCAGCACGCCGTCCGATGGGCCATTGATCATCTGGTGATAAGCAACCCGCTCATTATTCTCATCCATGTCAGACATAAATCTAATCAACATCGTAGCGCGGGCGATTCTGAAAATGGCGAAACTGATGCGCAGCAGCTGTTCGTTCCCTACCGTGGATATTGTGCTCGTAAAGGGGTTCAGTTGAGGGAGGTTGTTCTTGACGATACTGACGTTCCCAGAGCACTTGTCGACTATGTCCACAAGAATTGCATCAATAATTTTGTTGTCGGTTCTTCGACAAGGAGTGCTCTAGCAAGGAAATTTAAAGGTCCTGATGTTCCAACCAGCGTAATAAAAACTGCCCCGGAGTTTTGTTCTGTGTATGTAATATCAAAAGGGAAGATAATATCAGCCAGGGCAGCTCTTCGGCCAGTGGCTAATACTGCCATGCCACCAAGACAACCGTCGCCCCTTGCAATTCAGCCAAATGTTCAACCAGACAGCAGCTACGAACTAGAAAATGGAGCCAAAGGGCAACCAGCAAGGGAAGGACGGAAAAGTACGGGTTCAGAGAGAATTCTCATAGAAAAGAATGGAAAACCAGCAAAAGCGTTGACCCGTGAGAGGCCAAAAACTTCTCCTACTAATATATCAATGGAAACTATAGAAGTTCCAAACCGAGGGTCTAGGACTTCATTTAGCCGTGATTCGATCTCCGATGACAATATGTTGACTGCACAGATGCCTTTTGGTTCAATGGATGTGAGTGGTCAAAATTTGGATTTCAGTATAAGCTCAAGTGCGTCAACCGACTCGGCTTCCACACAATCTACTCGAGAGCTGGAGGCTGAGATGAAAAGATTGAAGCTGGAATTAAAGCAAACCATGGATATGTATAGCTCAGCTTGCAAAGAGGCAATCTCAGCCAAGAATAAGGCTAGAGAACTTAGTCAGTGGAAGCAAGATGAGGCACGTAAGTTTGAGGAAGTCAGGCTAGCTGAAGAGGCTGCTCTTGCTATTGCTGAGATGGAGAAAGCTAAGTGTAAAGCTGCCATTGAAGCAGCAGAGGCAGCACAAAAGCTTGCTGAAAGAGAAGCCCAGAGAAGAAAACAGGCTGAAATGAAGGCCAGACGTGAGGCAGAAGAGAAAAAACGAGCACTGAGTGCTCTAGCTCAGAATGACGTCCGTTATAGAAAATACACCATAGAGGAGATTGAGGAAGCTACTGAAAAGTTCTCTGAAAAATTGAAGATTGGAGAAGGTGGATACGGTCCTGTTTATGGAGGCAAACTTGATCATACAGCTGTTGCCATTAAAGTTTTAAGACCTGACGCTGCTCAAGGGCGGAAACAATTCCAACAAGAGGTGGAGGTTCTGTGCTGCATTAGACATCCAAACATGGTCCTCCTTCTTGGAGCATGCCCCGAGTATGGTTGCTTGGTATATGAGTACATGCATAATGGGAGCTTAGAAGATAGACTTTTCCGGAGAGGGAATACTCCTCCATTATCTTGGAGACGACGCTTCAAAGTAGCTGCCGAAATTGCAACTGCACTTCTTTTTCTTCACCAAGCAAAGCCAGACCCACTTGTGCATAGGGACCTTAAGCCAGCTAACATTCTCTTGGACCGCAATTATGTGAGCAAAATCAGTGATGTTGGCCTAGCTCGACTAGTCCCACCTTCTGTAGCTGATCAAGTCACCCAATATCACTTGACCTCAGCAGCTGGCACGTTTTGTTACATTGATCCTGAGTACCAACAAACAGGAAAGTTAACGACAAAGTCAGATGTCTACTCGTTTGGAATATTGCTACTTCAAATTATTACTGCCAAGCCTCCAATGGGTCTGGCTCACCATGTTCAGAGGGCCATTGAGAAAGAGAAGTTTGATGAGATGATGGACCCTACAATTTCAGATTGTCCATTGGAGGAGGCTATAAATTTTGCAAAACTGGCATTGACGTGCGCTGAATTGAGGAAGAGAGACAGGCCAGATCTTGGAACAGTTATAGTTCCAGAGCTTAACAGGTTAAGAGATATTGGGAGGAGTTCTGATAAACGTGACAGTAGGAATCTTGGTCACTTTCCACGCTCTGCCGCATCAAGTTCCAGTTCGAGGCCACAGTCATCAACTGAGTGTTTTTATTCCCTAAACCAGGATTCAAGATTGAGTTTCACTGATGAAGGAAGTTAG 2253 45.36 MSPSYPPEDGIPLNTTAVAIDKDKNSQHAVRWAIDHLVISNPLIILIHVRHKSNQHRSAGDSENGETDAQQLFVPYRGYCARKGVQLREVVLDDTDVPRALVDYVHKNCINNFVVGSSTRSALARKFKGPDVPTSVIKTAPEFCSVYVISKGKIISARAALRPVANTAMPPRQPSPLAIQPNVQPDSSYELENGAKGQPAREGRKSTGSERILIEKNGKPAKALTRERPKTSPTNISMETIEVPNRGSRTSFSRDSISDDNMLTAQMPFGSMDVSGQNLDFSISSSASTDSASTQSTRELEAEMKRLKLELKQTMDMYSSACKEAISAKNKARELSQWKQDEARKFEEVRLAEEAALAIAEMEKAKCKAAIEAAEAAQKLAEREAQRRKQAEMKARREAEEKKRALSALAQNDVRYRKYTIEEIEEATEKFSEKLKIGEGGYGPVYGGKLDHTAVAIKVLRPDAAQGRKQFQQEVEVLCCIRHPNMVLLLGACPEYGCLVYEYMHNGSLEDRLFRRGNTPPLSWRRRFKVAAEIATALLFLHQAKPDPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADQVTQYHLTSAAGTFCYIDPEYQQTGKLTTKSDVYSFGILLLQIITAKPPMGLAHHVQRAIEKEKFDEMMDPTISDCPLEEAINFAKLALTCAELRKRDRPDLGTVIVPELNRLRDIGRSSDKRDSRNLGHFPRSAASSSSSRPQSSTECFYSLNQDSRLSFTDEGS 750
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4007667 4012135 + MC08g0492 Mch8g0558 694179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0558 750 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 404 503 - -
Mch8g0558 750 SUPERFAMILY Protein kinase-like (PK-like) 413 689 IPR011009 -
Mch8g0558 750 MobiDBLite consensus disorder prediction 701 733 - -
Mch8g0558 750 Gene3D HUPs 13 151 IPR014729 -
Mch8g0558 750 Coils Coil 297 317 - -
Mch8g0558 750 Gene3D Phosphorylase Kinase; domain 1 408 503 - -
Mch8g0558 750 MobiDBLite consensus disorder prediction 715 733 - -
Mch8g0558 750 Gene3D Transferase(Phosphotransferase) domain 1 504 714 - -
Mch8g0558 750 CDD STKc_IRAK 437 697 - -
Mch8g0558 750 CDD STK_N 15 152 - -
Mch8g0558 750 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 17 149 - -
Mch8g0558 750 MobiDBLite consensus disorder prediction 197 226 - -
Mch8g0558 750 Pfam Universal stress protein family 18 148 IPR006016 -
Mch8g0558 750 ProSiteProfiles Protein kinase domain profile. 431 694 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0558 750 SMART serkin_6 431 691 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0558 750 MobiDBLite consensus disorder prediction 167 240 - -
Mch8g0558 750 ProSitePatterns Serine/Threonine protein kinases active-site signature. 549 561 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g0558 750 PANTHER OS02G0152300 PROTEIN 17 711 IPR051348 -
Mch8g0558 750 Coils Coil 357 412 - -
Mch8g0558 750 Pfam Protein tyrosine and serine/threonine kinase 435 689 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0638 Mch-Chr11:4126323 Mch8g0558 Mch-Chr8:4007667 2.14E-249 dispersed
Mch7g0671 Mch-Chr7:11392352 Mch8g0558 Mch-Chr8:4007667 9.62E-36 dispersed
Mch8g0558 Mch-Chr8:4007667 Mch8g2590 Mch-Chr8:29058551 3.23E-227 dispersed
Mch8g0558 Mch-Chr8:4007667 Mch9g0239 Mch-Chr9:1808550 1.46E-222 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77577 PF07714 PK_Tyr_Ser-Thr 3.50E-42 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0558 - - - 0.0