Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0631 ATGCTGTGCGCTTGCTCAGGAGAGCAATTTAAGTTCGAAGAGCCACCACAGTCACCAGAGTCACTTGCAACGAGGGATTTCTCGGCCAGTTGCCTTTCCTCGAGAACTGGAGACTGGGATTCAAAATTTGAAGATTCTCAAGTAGATGAAGTTGAATCCACTTTAAGAGAAGCCCTCTCATTAAACTACGAGGAAGCCAGAGCTTTGCTGGGGAGGCTTGAATATCAAAGAGGAAATTTTGATGCTGCCCTTCAGGTATTTCAAGGTATAGACATTAGATCTTTAATGCCAAGAATGATAAAGGCAATCGCTGAAAAGAGTAGGGAGGAAAAACCTCGTCCTAAAGGAGACGGTGCACCCCCTAGTGGTGTAATGTCCATGCATTCTGTTAGTCTGCTTCTTGAAGCAATTTTACTCAAGGCAAAATCACTGGAGGAACTTGGCAGATATATAGAGTCTGCCAAAGAGTGCAGGATAATTCTTGATACGGTGGAATCAGCTCTACCCAACGGAATGCCTGAGTGCTTTGGTGAAGACTGCAAATTGCAGGAAATGCTTCAAAAAGCTTTGGAACTACTACCTGCTTTGTGGACTAAGGGAGGCCATCTCGATGAGGCCGTAAACGCCTATCGCCGGGCTCTTGTTAAACCATGGAATTTAGATCCAAATAAGTTGGCTGCCATACAGAAAGAATTGGTTGGCACATTACTTTATGGAGGTGTTGAAGCAAGCCTTCCGCTTAAGTTCCATGTATTCGGTCCAAGAACACCTAAAAATAATGTGGAAGAAGCAATCCTTTTGTTGTTAATACTCATGAGGAAAGTGGTGATGCAGGAAATAAACTGGGATCCAGAGATTATGAATCATCTGACTTATGCGCTTTCTATCACTAGACAATTTGAATTACTCGCTGAGCATGTGGAGCAGATCCTTCCTGGAATATTTAGTCGAGCTGAGAGGTGGTACTTTCTTGCTCTTTGTTACAATGCAGCAGGACAGAATGAAGCAGCTTTGAACCTTGTAAGGAAAGTTTGCGGTTTCTCTGAAGTAAAGAACAAACCCCATTTTCATTCTTTTTTGTTGCTTGCAAAATTGTGTTCAGAGGACACAAAATATGCAAGTGCTGGAATTGAAATTGCTCGTAGAATGATCGATATGGCCTGTGAAGAAAGTAAACACTTCACTTCTGAAGCCCACAAATATTTAGGTGTTTGCTATGGGAATTCAGCTAGAGCTTCTGTATCAGATTCTGAAAGAATTCTTTTCCAAAGTGAGTCATTGAACTCCCTAAGAGTTTCTTCTCTCAGTGGGAGGCATGACCCAGAAGTAATGTTCAATATTAGCTTGGAAAATGCTGTACAGAGAAATCTTGATGTTGCCTTCTACAGCGCAATGAGATACTCAAATATGGTGGCTGACGGTTCTGGAAGAGGGTGGAAGCTTTTGACGCTCATATTTTCAGCTGAGCAGCGATTCAAGGATGCCGAAACCATAGTTGATTTTGCTTTGGATGAAGCTGAGAGGACGGATCAATTAGATTTTCTTCGACTGAAAGCTGTACTCAAAATTGCTCAGGAGCAACCAAAGCAAGCAATAGAAACCTACAGAATCTTGCTGGCTCTAATTCAAGCACGTGGAGAACTTCAGCTTCAGGCTAAGAACTTTGACCAATCGAAAGACTTGGAGCTAGAGGCAACGAAAGAATGTAACTTGGAATGCGCAGCCTGGCAGGATTTGGCTGCCATATATGCAAAACTTGCTTCCTGGGCGGATGCAGAAATTTGTCTGAATAAAGCCAAATCATTAGATGTTCATTGCCCCAGAGGTTGGCATACAACAGGCAAGTATTTTGAAGCTCGATCATTACACAAGGAAGCCCTTGTTTCATTCTCAGTCTCTCTGTCAATCGATCCTGATTATGTTCCGAGTATCATCTCAACAGCAGAAGTGTTAATGAAATGCGGTAACCAATCGCTTCCGATTGCACGCAGCTTGCTGATGAATGCTGTAAGATTGGATCCTACCAGCCATGAAGCATGGTTCAACCTTGGAGTGCTGTCCAAAATGGAAGGTCTATTGCTACAAGCTGCAGATTTTTTTCAAGCTGCACATGAACTCCAGCTTTCTGCTCCTCCTCAGAGTTTCGTCTAA 2151 42.91 MLCACSGEQFKFEEPPQSPESLATRDFSASCLSSRTGDWDSKFEDSQVDEVESTLREALSLNYEEARALLGRLEYQRGNFDAALQVFQGIDIRSLMPRMIKAIAEKSREEKPRPKGDGAPPSGVMSMHSVSLLLEAILLKAKSLEELGRYIESAKECRIILDTVESALPNGMPECFGEDCKLQEMLQKALELLPALWTKGGHLDEAVNAYRRALVKPWNLDPNKLAAIQKELVGTLLYGGVEASLPLKFHVFGPRTPKNNVEEAILLLLILMRKVVMQEINWDPEIMNHLTYALSITRQFELLAEHVEQILPGIFSRAERWYFLALCYNAAGQNEAALNLVRKVCGFSEVKNKPHFHSFLLLAKLCSEDTKYASAGIEIARRMIDMACEESKHFTSEAHKYLGVCYGNSARASVSDSERILFQSESLNSLRVSSLSGRHDPEVMFNISLENAVQRNLDVAFYSAMRYSNMVADGSGRGWKLLTLIFSAEQRFKDAETIVDFALDEAERTDQLDFLRLKAVLKIAQEQPKQAIETYRILLALIQARGELQLQAKNFDQSKDLELEATKECNLECAAWQDLAAIYAKLASWADAEICLNKAKSLDVHCPRGWHTTGKYFEARSLHKEALVSFSVSLSIDPDYVPSIISTAEVLMKCGNQSLPIARSLLMNAVRLDPTSHEAWFNLGVLSKMEGLLLQAADFFQAAHELQLSAPPQSFV 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4528230 4532602 - MC08g0559 Mch8g0631 694252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0631 716 SMART tpr_5 318 351 IPR019734 GO:0005515(InterPro)
Mch8g0631 716 SMART tpr_5 573 606 IPR019734 GO:0005515(InterPro)
Mch8g0631 716 SMART tpr_5 512 545 IPR019734 GO:0005515(InterPro)
Mch8g0631 716 SMART tpr_5 677 710 IPR019734 GO:0005515(InterPro)
Mch8g0631 716 SMART tpr_5 607 640 IPR019734 GO:0005515(InterPro)
Mch8g0631 716 Pfam Tetratricopeptide repeat 53 90 - -
Mch8g0631 716 SUPERFAMILY TPR-like 544 707 IPR011990 GO:0005515(InterPro)
Mch8g0631 716 SUPERFAMILY TPR-like 49 344 IPR011990 GO:0005515(InterPro)
Mch8g0631 716 Gene3D Tetratricopeptide repeat domain 22 244 IPR011990 GO:0005515(InterPro)
Mch8g0631 716 Gene3D Tetratricopeptide repeat domain 258 541 IPR011990 GO:0005515(InterPro)
Mch8g0631 716 Gene3D Tetratricopeptide repeat domain 542 713 IPR011990 GO:0005515(InterPro)
Mch8g0631 716 PANTHER PROTEIN NPG1 1 715 IPR043376 -
Mch8g0631 716 SUPERFAMILY TPR-like 308 542 IPR011990 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g0116 Mch-Chr5:733447 Mch8g0631 Mch-Chr8:4528230 1.14E-170 dispersed
Mch8g0631 Mch-Chr8:4528230 Mch6g2836 Mch-Chr6:29647254 2.49E-182 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0631 K21843 - csv:101209448 1281.54