Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0649 ACAGATAAACAGGCCTTGATTTTCATGAAGTCTGGATTTAGCAATCTCCAGCCTTCAAATCCCTTGTCTTCTTGGGACCAAAACTCATCCCCCTGCAACTGGACTCGTGTCAGTTGCGACAAAGATGGCACTAGAGTTGTTTCCCTTGATCTTTCAAGCCTGCAACTTTCAGGATCCTTAGACCCTAATATTGGCAACCTCTCATTTCTCCACTCCCTTCAGCTCCAAAACAACCTGTTAACAGGACCAATCCCCCATCAAATTTCCAATCTTTTTCGCCTCAAACTCCTCAACTTGAGCTCCAACTCCCTTGAAGGTGGGTTCCCCTCCAACATCAGTGGAATGGCTGCCCTTGAGACTATTGATCTGACATCCAATAAGATCACAGCACGTCTCCCTCAAGAACTCAGTCTCTTAACCAACCTCAAAGTCTTGAAATTGGCTCAAAATCATCTTTTTGGCGAAATCCCACCTTCGTTTGGCAACCTCTCCTCTCTTGTCACCATCAATTTTGGTACAAATTCTCTCACAGGTCCGATTCCGAGTGAGTTGAGTCGGCTCCAAAATCTCGAGGATCTTATCATTACCATTAACAATCTCACAGGCACTGTTCCCCCTGCCATATTCAATATGTCTTCTTTAGTTACTCTGGCCTTGGCTTCCAACAAGCTGTGGGGAACATTTCCAAGGGATATTGGGGAAACACTCCCCAATCTCTTAGTCTTCAACTTTTGTTTCAATGAATTTACAGGAACCATTCCTCCTTCGCTGCATAATATCACTAATATTCAGGTCATTCGTTTTGCCTATAACTTTCTTGAAGGGACCGTGCCACCAGGTTTGGAGAATCTCCACAATCTTACCATGTATAATGTTGGGTACAATAAGCTCGTTTCAGGTGAAGATGGGATTAGTTTCATCAATTCACTGACAAACAGTTCTCGCCTTTCTTTTCTTGCCATTGATGCCAACAATTTTGAAGGTCAGATTCCGGAATCCATTGGGAATCTTTCCAAGTCTCTTTCCATATTGTTCATGGGACAGAATCGTCTCTCTGGAAATATTCCTCCCTCAATTGGGAATTTAAATGGCTTGGCTTTGCTGAATTTGAGCTACAATTCGCTCTCTGGCGAAATCCCACCAGAGATTGGCCAATTGGAGAACCTCCAAAGCCTTGTTTTGGCCAGAAATCGGCTCTCGGGTTCGATTCCAAGCTCCTTGGGGAATCTTCAAAAACTGACAACTCTTGATTTATCAGGAAATGAGCTGATTGGTGGCATACCCACCTCTTTTTCAAACTTCCAGAAGCTTCTTTCGATGGATTTATCCAACAATAAGTTCAATGGAAGCATACCCAAAGAAGCTCTCAATCTCCCTGCGAGTACTACATTGAACATTTCCAACAATTTCCTTACTGGTCCTCTGCCTGAGGAAATTGGGTCCCTTGGAAAGCTCTTTCAGATTGATATGTCAAACAATCTCATATCTGGACAGATTCCTTTATCTATCAAAGGTTGGGATAGCTTGGAGAAGTTGTTCATGGCAAGAAATGAATTCTCAGGTCCAATTCCCAGTACTCTAGGAGAACTTAAAGGCCTCCAAGTCATTGACCTCTCCTCAAATCATCTCTCTGGCCCCATCCCTGATAACATTCAAGATCTATTAGCCCTTCAGTATCTGAATCTCTCGTTTAACGACCTCGAGGGAGCAGTTCCTCAAGGTGGAATCTTTGAAAGTAAAACCAATGTCAGTTTACTAGGAAATCCAAAGCTATGCTTGTATTCTTCCTCATGTTCAGAGAGTGACTCCAAACGAGACAAAGCAGTCAAAGCTATAATCTTCACGGTTGTGTTTTCAGCTCTGGCACTGTCCTTCATCTTTGGTACGTTGATCCATTTCATGAGGAAAAAGTCAAAGACTGCACCATTGGTTGACTTACTCAAAGGTCAACACGAAATGGTGTCTTATGATGAGCTGCGTTTGGCAACAGAGAATTTCAGCGAGCAGAATTTGATTGGAAAAGGAAGCTTTGGGTCGGTGTACAAGGGAATTTTGAAGCAAGGAATTGCCGTGGCTATTAAGGTTCTTGACATCAACAGGACTGGTTCTATAAGGAGCTTTATGGCAGAGTGTGAAGCTTTGAGAAACGTGAGACATCGAAATCTCGTTAAACTCATCACATCATGCTCCAGCATAGACTTCTCAAACATGGAATTTCGAGCTCTGGTTTACGAGCTTTTGAGCAATGGAAGCTTGGATGAGTGGATTCGAGGCCAAAGAAGCCACGAAAGTGGAATTGGGCTTGATATTCTTGAGCGGGCGAACATTGCCATTGATGTTGCTTCTGCAATAAATTATCTACACCATGATTGTGACCTCCCCATAGTTCACTGTGATTTAAAGCCCAGCAACATTCTTCTAGATGCTGATATGATTGCAAAAGTTGGAGATTTTGGATTGGCTCGGTTGCTAATGGAAAGTGCCACCCCTCAATCTTCCATCACTTCCACTCATGTTCTAAAAGGTTCCATCGGTTACCTTCCTCCAGCCATTTTTCAAGGCTTTATAATGACTAACTTTGAAGGATTCACTTTGATATTTGCAGACGGCACACTTCTTTGTGATGGATCGACCATGCTGAGCATCGACACAGACAAAATGGCGTTGCTGTCATTCAAGTCTCGACTCAACTTATCATCCGTCAGCTCTCTGTCGTCGTGGAACGAACATTCATCACCCTGCAACTGGACTGGTGTCAGCTGCAGCAGATATGGCAGCAGAAGAGTAGTTGAACTTCATCTTTCCGGCTTCGGACTGACGGGCTCAATAGATCCTCATGTTGGGAACCTTTCCTTCCTTGAATCTCTTCAACTTCAGAACAACAAATTCACGGGACCAATCCCTAGACAAATCGGTAACCTTTTGCGCCTGAGAGTTGTAAACATGAGTTCCAACAATTTAGAAGGGGGACTTCCCTTCAACTTCAGCGCAATGGCTGCACTTGAGATTCTTGACTTGATGTCAAATGAAATCACAGGCAGGCTTCCTGAAGAGCTGGGCAGTTTAACCAACCTACAAGTCTTGAACTTGGCACACAACCAACTCTTCGAGAGTCTCCCCAATCTTTTAGTCTTCCACTTTTGCTTCAATGAATTTACTGGAACAATCCCTCGGTCATTCCACAACATCACGAAAATTCAAGTCATACGCTTTGCTCACAATTTTCTTCATGGAACGGTGCCACCAGGTCTGGAAAATCTCCGTGAACTTTCAATGTATAATATTGGGTCAAATAGAATCGTCAGCGTGGGTGAAAATGGACTTAGCTTCATAACTTCTTTGACAAACAGCTCGCATCTCAACTACCTTGCAATTGATGATAATCAGTTGGAAGGTCTAATTCCAGCATCAATTGGAAATCTTTCGAAGGACCTTTCGATATTGAACATGGGAGGGAATCGTATGTATGGCAATATACCTACCTCAATTGCTAATTTGCGTGGCTTGTCTCTGCTGAATTTGAGCGACAACTCGTTATCAGGTGAAATCCCACCTCAAATAGGCAACTTGGAAAAGTTACAAAAGCTTGGTTTGGCCAGGAATCGATTTTCTGGTAGTATTCCAAGTTCCTTGGGTGATCTTCGAATGTTGAGTGAAATTGATTTTTCAGGAAACGATCTGGCTGGTAACATACCCACGTCTTTTGGGAACTTTACGAAAGTAATCTCATTGGACTTGTCCAACAATAAGCTCAATGGAAGTATACCAAGAGAGACTCTCAATTTGCCTGGTTTAAGCATGGTTTTAAATCTCTCTAATAACCTTTTCAGTGGGTCTCTTCCTGAAGAAATCGGATCTTTAGAAAATGTTGTAACCATTGATATATCTAATAACCATATCTCTGGTAATATTCCTCCTTCAATCAGTGGTTGCAGAAGCTTAGAGGTATTGATAATGGCCAGAAATGAATTCTCGGGTCCCATTCCTGGAATTTTAAAAGATCTTAGAGGCCTCCGACGTCTTGACATCTCATTAAACTATCTTTCAGGCCTCATTCCTAAAGAGCTTCAAAGTATAACAGGCCTTCAATATTTAAATCTCTCTTTTAATAACCTGGAGGGAGCAGTCCCCAGGGGTGGAGTGTTCGAAAGCAACAGCAGAATTTATTTAGAAGGAAATCCAAAGCTTTGCCTGTATCCTTCATGTCCAGAGAGTGGATCTAAACGTGCCGAAGTAATTAAAGTTATCGCCTTCACAGCTGTATTTTCAACACTAGCACTCTGCTTTATCATTGGTATGCTGATCTATTTTAAGACGAAAAAATCAAAG 4329 42.5 TDKQALIFMKSGFSNLQPSNPLSSWDQNSSPCNWTRVSCDKDGTRVVSLDLSSLQLSGSLDPNIGNLSFLHSLQLQNNLLTGPIPHQISNLFRLKLLNLSSNSLEGGFPSNISGMAALETIDLTSNKITARLPQELSLLTNLKVLKLAQNHLFGEIPPSFGNLSSLVTINFGTNSLTGPIPSELSRLQNLEDLIITINNLTGTVPPAIFNMSSLVTLALASNKLWGTFPRDIGETLPNLLVFNFCFNEFTGTIPPSLHNITNIQVIRFAYNFLEGTVPPGLENLHNLTMYNVGYNKLVSGEDGISFINSLTNSSRLSFLAIDANNFEGQIPESIGNLSKSLSILFMGQNRLSGNIPPSIGNLNGLALLNLSYNSLSGEIPPEIGQLENLQSLVLARNRLSGSIPSSLGNLQKLTTLDLSGNELIGGIPTSFSNFQKLLSMDLSNNKFNGSIPKEALNLPASTTLNISNNFLTGPLPEEIGSLGKLFQIDMSNNLISGQIPLSIKGWDSLEKLFMARNEFSGPIPSTLGELKGLQVIDLSSNHLSGPIPDNIQDLLALQYLNLSFNDLEGAVPQGGIFESKTNVSLLGNPKLCLYSSSCSESDSKRDKAVKAIIFTVVFSALALSFIFGTLIHFMRKKSKTAPLVDLLKGQHEMVSYDELRLATENFSEQNLIGKGSFGSVYKGILKQGIAVAIKVLDINRTGSIRSFMAECEALRNVRHRNLVKLITSCSSIDFSNMEFRALVYELLSNGSLDEWIRGQRSHESGIGLDILERANIAIDVASAINYLHHDCDLPIVHCDLKPSNILLDADMIAKVGDFGLARLLMESATPQSSITSTHVLKGSIGYLPPAIFQGFIMTNFEGFTLIFADGTLLCDGSTMLSIDTDKMALLSFKSRLNLSSVSSLSSWNEHSSPCNWTGVSCSRYGSRRVVELHLSGFGLTGSIDPHVGNLSFLESLQLQNNKFTGPIPRQIGNLLRLRVVNMSSNNLEGGLPFNFSAMAALEILDLMSNEITGRLPEELGSLTNLQVLNLAHNQLFESLPNLLVFHFCFNEFTGTIPRSFHNITKIQVIRFAHNFLHGTVPPGLENLRELSMYNIGSNRIVSVGENGLSFITSLTNSSHLNYLAIDDNQLEGLIPASIGNLSKDLSILNMGGNRMYGNIPTSIANLRGLSLLNLSDNSLSGEIPPQIGNLEKLQKLGLARNRFSGSIPSSLGDLRMLSEIDFSGNDLAGNIPTSFGNFTKVISLDLSNNKLNGSIPRETLNLPGLSMVLNLSNNLFSGSLPEEIGSLENVVTIDISNNHISGNIPPSISGCRSLEVLIMARNEFSGPIPGILKDLRGLRRLDISLNYLSGLIPKELQSITGLQYLNLSFNNLEGAVPRGGVFESNSRIYLEGNPKLCLYPSCPESGSKRAEVIKVIAFTAVFSTLALCFIIGMLIYFKTKKSK 1443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4663440 4670641 + MC08g0577 Mch8g0649 694270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0649 1443 Gene3D Transferase(Phosphotransferase) domain 1 747 863 - -
Mch8g0649 1443 Pfam Leucine rich repeat 93 152 IPR001611 GO:0005515(InterPro)
Mch8g0649 1443 Pfam Leucine rich repeat 508 567 IPR001611 GO:0005515(InterPro)
Mch8g0649 1443 Pfam Leucine rich repeat 976 1035 IPR001611 GO:0005515(InterPro)
Mch8g0649 1443 Pfam Leucine rich repeat 1312 1372 IPR001611 GO:0005515(InterPro)
Mch8g0649 1443 Gene3D Phosphorylase Kinase; domain 1 629 746 - -
Mch8g0649 1443 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524(InterPro)
Mch8g0649 1443 Gene3D Ribonuclease Inhibitor 301 602 IPR032675 -
Mch8g0649 1443 Gene3D Ribonuclease Inhibitor 1104 1406 IPR032675 -
Mch8g0649 1443 FunFam Inactive leucine-rich repeat receptor-like protein kinase 308 601 - -
Mch8g0649 1443 SMART LRR_typ_2 410 433 IPR003591 -
Mch8g0649 1443 SMART LRR_typ_2 1287 1311 IPR003591 -
Mch8g0649 1443 SMART LRR_typ_2 187 211 IPR003591 -
Mch8g0649 1443 SMART LRR_typ_2 1190 1214 IPR003591 -
Mch8g0649 1443 SMART LRR_typ_2 1238 1262 IPR003591 -
Mch8g0649 1443 SMART LRR_typ_2 1022 1046 IPR003591 -
Mch8g0649 1443 SMART LRR_typ_2 362 386 IPR003591 -
Mch8g0649 1443 SMART LRR_typ_2 1335 1358 IPR003591 -
Mch8g0649 1443 SMART LRR_typ_2 530 553 IPR003591 -
Mch8g0649 1443 SMART LRR_typ_2 950 974 IPR003591 -
Mch8g0649 1443 SMART LRR_typ_2 554 579 IPR003591 -
Mch8g0649 1443 SMART LRR_typ_2 1359 1384 IPR003591 -
Mch8g0649 1443 SMART LRR_typ_2 1166 1189 IPR003591 -
Mch8g0649 1443 SMART LRR_typ_2 434 458 IPR003591 -
Mch8g0649 1443 SMART LRR_typ_2 115 138 IPR003591 -
Mch8g0649 1443 SMART LRR_typ_2 139 162 IPR003591 -
Mch8g0649 1443 SMART LRR_typ_2 67 91 IPR003591 -
Mch8g0649 1443 SUPERFAMILY Protein kinase-like (PK-like) 647 856 IPR011009 -
Mch8g0649 1443 SUPERFAMILY L domain-like 12 298 - -
Mch8g0649 1443 Pfam Leucine Rich Repeat 367 386 IPR001611 GO:0005515(InterPro)
Mch8g0649 1443 Pfam Leucine Rich Repeat 1268 1287 IPR001611 GO:0005515(InterPro)
Mch8g0649 1443 Pfam Leucine Rich Repeat 1169 1190 IPR001611 GO:0005515(InterPro)
Mch8g0649 1443 Pfam Leucine Rich Repeat 1289 1311 IPR001611 GO:0005515(InterPro)
Mch8g0649 1443 Pfam Leucine Rich Repeat 953 974 IPR001611 GO:0005515(InterPro)
Mch8g0649 1443 Pfam Leucine Rich Repeat 462 482 IPR001611 GO:0005515(InterPro)
Mch8g0649 1443 Pfam Leucine Rich Repeat 1217 1238 IPR001611 GO:0005515(InterPro)
Mch8g0649 1443 Pfam Leucine Rich Repeat 340 362 IPR001611 GO:0005515(InterPro)
Mch8g0649 1443 Pfam Leucine Rich Repeat 1242 1259 IPR001611 GO:0005515(InterPro)
Mch8g0649 1443 Pfam Leucine Rich Repeat 1192 1214 IPR001611 GO:0005515(InterPro)
Mch8g0649 1443 PANTHER OS04G0122200 PROTEIN 22 854 IPR051809 -
Mch8g0649 1443 FunFam Leucine-rich repeat receptor-like kinase 4 112 - -
Mch8g0649 1443 SUPERFAMILY L domain-like 884 1142 - -
Mch8g0649 1443 Pfam Leucine rich repeat N-terminal domain 883 922 IPR013210 -
Mch8g0649 1443 Pfam Leucine rich repeat N-terminal domain 1 40 IPR013210 -
Mch8g0649 1443 SMART serkin_6 666 935 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0649 1443 FunFam LRR receptor-like serine/threonine-protein kinase EFR 637 746 - -
Mch8g0649 1443 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 113 200 - -
Mch8g0649 1443 FunFam Os07g0541700 protein 747 839 - -
Mch8g0649 1443 Pfam Protein kinase domain 667 851 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0649 1443 Gene3D Ribonuclease Inhibitor 1041 1103 IPR032675 -
Mch8g0649 1443 Gene3D Ribonuclease Inhibitor 882 1040 IPR032675 -
Mch8g0649 1443 FunFam Leucine-rich repeat receptor-like protein kinase 882 1041 - -
Mch8g0649 1443 Pfam Leucine Rich repeats (2 copies) 388 427 IPR025875 -
Mch8g0649 1443 ProSiteProfiles Protein kinase domain profile. 666 1035 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0649 1443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 795 807 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g0649 1443 Gene3D Ribonuclease Inhibitor 1 59 IPR032675 -
Mch8g0649 1443 Gene3D Ribonuclease Inhibitor 60 300 IPR032675 -
Mch8g0649 1443 ProSiteProfiles Leucine-rich repeat profile. 1024 1046 IPR001611 GO:0005515(InterPro)
Mch8g0649 1443 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 201 306 - -
Mch8g0649 1443 SUPERFAMILY L domain-like 1145 1400 - -
Mch8g0649 1443 FunFam LRR receptor-like serine/threonine-protein kinase EFR 1106 1406 - -
Mch8g0649 1443 SUPERFAMILY RNI-like 217 582 - -
Mch8g0649 1443 SMART LRR_sd22_2 139 165 - -
Mch8g0649 1443 SMART LRR_sd22_2 530 553 - -
Mch8g0649 1443 SMART LRR_sd22_2 115 138 - -
Mch8g0649 1443 SMART LRR_sd22_2 1022 1041 - -
Mch8g0649 1443 SMART LRR_sd22_2 1287 1313 - -
Mch8g0649 1443 SMART LRR_sd22_2 338 364 - -
Mch8g0649 1443 SMART LRR_sd22_2 410 436 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g1924 Mch-Chr5:19170040 Mch8g0649 Mch-Chr8:4663440 3.24E-76 dispersed
Mch8g0649 Mch-Chr8:4663440 Mch8g0653 Mch-Chr8:4681074 6.77E-97 dispersed
Mch8g0649 Mch-Chr8:4663440 Mch8g0651 Mch-Chr8:4676399 1.56E-106 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77580 PF00069 Pkinase 4.00E-31 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0649 - - - 0.0