Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0655 ATGGCCGAGACAGATAACTGCGTCCGTGTCACTCGCGCTTCTCAGAAGAGAGTTGCGGCTGCCGCCATGGCTGATGATCAGCCCGCCAATAAGAAGCGAGTGGTTCTGGGAGAGCTTCCCAACGTTCAAAACGTCGTTGGATCAGCGGCGCAGAAGAGGAGGGCGAAGTCGCAGAAGAGTAACAGCAAGCCCAAGAAGAGAAGTAAGCTATCTGTTGCTTCGACGATTAAGACTGTTGTTGTCGAAGACAGTGAGCCGAAGTTGAGCGTTGATGAAATCTTGGATGACCCAGAAATGATGGGGCCTTATTCCTCTGATATCTATGCTTATCTTCGCAAAATGGAGGCGGAACCCAAAAGAAGGCCAATTCCAAATTACATTGAGAAGATTCAGGCGGACATAAGTGCCAATATGAGAGGGGTTTTGGTAGATTGGATGGTTGAGGTTGCAGAGGAATACAAACTCTGCTCGGATACTCTGTATCTATCCATCTCATACATCGATAGGTTCCTATCTATGAACATTCTCAGTAGGCAAAGGCTTCAGCTGTTGGGCGTTTCTTCAATGCTTATTGCCTCGAAGTATGAAGAGATCACCCCTCCACATGTGGAAGATTTCTGTTACATAACAGATAATACTTATAGAAGGGAAGAGGTTGTGAAGATGGAGGCTGATATACTCAAGTCTTTGAACTTTGAAATGGGGAATCCTACTGTCAAGACATTCTTAAGGAGGTTTACTAATATTGCTCAAGAAGATTTCAAAACACCAAACTTGCAGTTGGAATTTCTGGGTCAATACCTCGCTGAGCTTAGCTTATTGGACTATAATTTTGTCAAGTTTTTGCCTTCATTGATAGCTGCTTCAGTTGCATATCTTGCTAAATTTATCATCCGGCCGAAGTTACACCCCTGGAGTCAAAACTTGCAACAGTACACGGGCTACAAGCCAGCTGATCTGAGGCAGTGTGTCATTCTTTTACATGACTTGTATATGGCCAGAAGAGGAGGATCTCTGATTGCTGTGAGAGAAAAATACAAGCTTCATAGGTTCAAGTGTGTGGCTATGATGCCTTCACCTCCTGAGATACCATTTTCCTATTTTGAAGAAGCTTAG 1116 44.27 MAETDNCVRVTRASQKRVAAAAMADDQPANKKRVVLGELPNVQNVVGSAAQKRRAKSQKSNSKPKKRSKLSVASTIKTVVVEDSEPKLSVDEILDDPEMMGPYSSDIYAYLRKMEAEPKRRPIPNYIEKIQADISANMRGVLVDWMVEVAEEYKLCSDTLYLSISYIDRFLSMNILSRQRLQLLGVSSMLIASKYEEITPPHVEDFCYITDNTYRREEVVKMEADILKSLNFEMGNPTVKTFLRRFTNIAQEDFKTPNLQLEFLGQYLAELSLLDYNFVKFLPSLIAASVAYLAKFIIRPKLHPWSQNLQQYTGYKPADLRQCVILLHDLYMARRGGSLIAVREKYKLHRFKCVAMMPSPPEIPFSYFEEA 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4687106 4689716 + MC08g_new0075 Mch8g0655 694276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0655 371 MobiDBLite consensus disorder prediction 46 69 - -
Mch8g0655 371 Gene3D - 106 356 - -
Mch8g0655 371 SMART cyclin_7 144 228 IPR013763 -
Mch8g0655 371 SMART cyclin_7 241 329 IPR013763 -
Mch8g0655 371 SUPERFAMILY Cyclin-like 237 362 IPR036915 -
Mch8g0655 371 FunFam Mitotic cyclin 6 122 222 - -
Mch8g0655 371 ProSitePatterns Cyclins signature. 139 170 IPR048258 -
Mch8g0655 371 SUPERFAMILY Cyclin-like 95 234 IPR036915 -
Mch8g0655 371 PANTHER CYCLINS 78 347 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Mch8g0655 371 Pfam Cyclin, N-terminal domain 106 234 IPR006671 -
Mch8g0655 371 Gene3D - 122 235 - -
Mch8g0655 371 FunFam Cyclin A1 224 356 - -
Mch8g0655 371 CDD CYCLIN_AtCycA-like_rpt2 237 351 - -
Mch8g0655 371 SMART Cyclin_C_2 237 360 IPR004367 -
Mch8g0655 371 MobiDBLite consensus disorder prediction 1 27 - -
Mch8g0655 371 Pfam Cyclin, C-terminal domain 237 359 IPR004367 -
Mch8g0655 371 PIRSF Cyclin_A_B_D_E 2 365 IPR046965 GO:0016538(InterPro)|GO:0044772(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0764 Mch-Chr4:5210337 Mch8g0655 Mch-Chr8:4687106 1.93E-95 dispersed
Mch8g0407 Mch-Chr8:2899062 Mch8g0655 Mch-Chr8:4687106 4.06E-86 dispersed
Mch8g0655 Mch-Chr8:4687106 Mch9g0378 Mch-Chr9:2821132 2.98E-93 dispersed
Mch11g0342 Mch-Chr11:2119280 Mch8g0655 Mch-Chr8:4687106 3.36E-162 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0655 K06627 - csv:101206145 635.18