Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0665 ATGGTGCCCTATGCCATTGACGCTCTGTATTGCTCCGAGGAGAACTGGGAGGACGACAACGACGGCGAAACCCAAAGCGGTTCCACTAATTTCATCGCCGGACCCAATTCTCCGATTTTGGTACACCACGACCTGTTTTGGGAAAACGATGAGTTCGTTTCTCTGCTCTCCAGGGAGAACCCTAATCGACTGTTCAAACCCCTTCAAACCGACCCTTCTCTCGCCGCCGCCCGACGAGGCGCCGTCGAGTGGATGCTGAAGGTCAATGCCCATTACTCCTTCTCTGCCCTCACCGCCGTTCTCGCCGTTGATTACTTCGACCGGTTTCTGTCGTGTTTCCAGTTTCAGAGAGATAAGCCGTGGATGTCCCAACTCGCTGCCGTTGCTTCCATCTCTCTTGCTGCCAAAGTGGAGGAGACCCAAGTGCCTCTGTTATTGGATCTTCAAGTGGAGGACAGTAGATATGTGTTTGAAGCCAAGACAATAAAGAAAATGGAGCTTCTTGTGCTCTCTACGCTTCAATGGCGGATGAATCCTGTAACCCCACTTTCGTTTGTGGATTATATCTCGAGGAGGCTCGGATTCAAAGACCATGTCTGCTGGGAAATTCTTCGGCGGTGTGAACGAACCCTTCTCTCTGTCATTTTAGAGTCAGATTTCATGTCCTTTCTTCCTTCTGTAATGGCCACCGCCACAATGCTGCACGTTTTCAAGGCTATGGAGTCCCAGCTTGGCGTCGAATATAATTCCCAGCTGCTAATTAGCATCCTCGGAATCGATAAGGGGAATGTGGAGGAATGCTGTAAGCTCATCTCAGATACATCCAGAAGAAATTGCAACCAACTTAAGAAGCGTAAATTCGGGTCGGTTCCGGGCAGCCCGAACGGGGTCATGGACGTGTCATTCAGCTCCGATAGCTCCAACGAATCGTGGTCGGTGGCCTCGTCGGTTTCGTCCTCGCCGGAGCCTTTAACGAAGAAAAGCAGAGCAAAGGATCAGTCTCTGGAGTCGGCGAGCCATTCAAATTTCCTCGACATTCCTCGCTAG 1047 51.1 MVPYAIDALYCSEENWEDDNDGETQSGSTNFIAGPNSPILVHHDLFWENDEFVSLLSRENPNRLFKPLQTDPSLAAARRGAVEWMLKVNAHYSFSALTAVLAVDYFDRFLSCFQFQRDKPWMSQLAAVASISLAAKVEETQVPLLLDLQVEDSRYVFEAKTIKKMELLVLSTLQWRMNPVTPLSFVDYISRRLGFKDHVCWEILRRCERTLLSVILESDFMSFLPSVMATATMLHVFKAMESQLGVEYNSQLLISILGIDKGNVEECCKLISDTSRRNCNQLKKRKFGSVPGSPNGVMDVSFSSDSSNESWSVASSVSSSPEPLTKKSRAKDQSLESASHSNFLDIPR 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4726293 4728485 - MC08g0585 Mch8g0665 694286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0665 348 CDD CYCLIN_AtCycD-like_rpt2 180 271 - -
Mch8g0665 348 ProSitePatterns Cyclins signature. 78 109 IPR048258 -
Mch8g0665 348 Gene3D - 179 269 - -
Mch8g0665 348 SUPERFAMILY Cyclin-like 162 288 IPR036915 -
Mch8g0665 348 SMART cyclin_7 83 171 IPR013763 -
Mch8g0665 348 FunFam D3-type cyclin 71 178 - -
Mch8g0665 348 PANTHER CYCLINS 59 272 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Mch8g0665 348 SMART Cyclin_C_2 180 306 IPR004367 -
Mch8g0665 348 MobiDBLite consensus disorder prediction 298 348 - -
Mch8g0665 348 Gene3D - 64 178 - -
Mch8g0665 348 Pfam Cyclin, N-terminal domain 69 178 IPR006671 -
Mch8g0665 348 Pfam Cyclin, C-terminal domain 180 286 IPR004367 -
Mch8g0665 348 CDD CYCLIN_AtCycD-like_rpt1 77 175 - -
Mch8g0665 348 SUPERFAMILY Cyclin-like 47 178 IPR036915 -
Mch8g0665 348 MobiDBLite consensus disorder prediction 298 324 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1386 Mch-Chr1:15753203 Mch8g0665 Mch-Chr8:4726293 4.30E-51 dispersed
Mch8g0255 Mch-Chr8:1702853 Mch8g0665 Mch-Chr8:4726293 2.90E-52 dispersed
Mch8g0665 Mch-Chr8:4726293 Mch9g2211 Mch-Chr9:22631366 4.58E-33 dispersed
Mch1g1237 Mch-Chr1:14685965 Mch8g0665 Mch-Chr8:4726293 1.12E-88 wgd
Mch10g0481 Mch-Chr10:3122085 Mch8g0665 Mch-Chr8:4726293 4.76E-101 wgd
Mch11g0329 Mch-Chr11:2026838 Mch8g0665 Mch-Chr8:4726293 1.04E-111 wgd
Mch4g0724 Mch-Chr4:4900652 Mch8g0665 Mch-Chr8:4726293 2.85E-81 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0665 K14505 - csv:101205442 495.352