Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g0665 | ATGGTGCCCTATGCCATTGACGCTCTGTATTGCTCCGAGGAGAACTGGGAGGACGACAACGACGGCGAAACCCAAAGCGGTTCCACTAATTTCATCGCCGGACCCAATTCTCCGATTTTGGTACACCACGACCTGTTTTGGGAAAACGATGAGTTCGTTTCTCTGCTCTCCAGGGAGAACCCTAATCGACTGTTCAAACCCCTTCAAACCGACCCTTCTCTCGCCGCCGCCCGACGAGGCGCCGTCGAGTGGATGCTGAAGGTCAATGCCCATTACTCCTTCTCTGCCCTCACCGCCGTTCTCGCCGTTGATTACTTCGACCGGTTTCTGTCGTGTTTCCAGTTTCAGAGAGATAAGCCGTGGATGTCCCAACTCGCTGCCGTTGCTTCCATCTCTCTTGCTGCCAAAGTGGAGGAGACCCAAGTGCCTCTGTTATTGGATCTTCAAGTGGAGGACAGTAGATATGTGTTTGAAGCCAAGACAATAAAGAAAATGGAGCTTCTTGTGCTCTCTACGCTTCAATGGCGGATGAATCCTGTAACCCCACTTTCGTTTGTGGATTATATCTCGAGGAGGCTCGGATTCAAAGACCATGTCTGCTGGGAAATTCTTCGGCGGTGTGAACGAACCCTTCTCTCTGTCATTTTAGAGTCAGATTTCATGTCCTTTCTTCCTTCTGTAATGGCCACCGCCACAATGCTGCACGTTTTCAAGGCTATGGAGTCCCAGCTTGGCGTCGAATATAATTCCCAGCTGCTAATTAGCATCCTCGGAATCGATAAGGGGAATGTGGAGGAATGCTGTAAGCTCATCTCAGATACATCCAGAAGAAATTGCAACCAACTTAAGAAGCGTAAATTCGGGTCGGTTCCGGGCAGCCCGAACGGGGTCATGGACGTGTCATTCAGCTCCGATAGCTCCAACGAATCGTGGTCGGTGGCCTCGTCGGTTTCGTCCTCGCCGGAGCCTTTAACGAAGAAAAGCAGAGCAAAGGATCAGTCTCTGGAGTCGGCGAGCCATTCAAATTTCCTCGACATTCCTCGCTAG | 1047 | 51.1 | MVPYAIDALYCSEENWEDDNDGETQSGSTNFIAGPNSPILVHHDLFWENDEFVSLLSRENPNRLFKPLQTDPSLAAARRGAVEWMLKVNAHYSFSALTAVLAVDYFDRFLSCFQFQRDKPWMSQLAAVASISLAAKVEETQVPLLLDLQVEDSRYVFEAKTIKKMELLVLSTLQWRMNPVTPLSFVDYISRRLGFKDHVCWEILRRCERTLLSVILESDFMSFLPSVMATATMLHVFKAMESQLGVEYNSQLLISILGIDKGNVEECCKLISDTSRRNCNQLKKRKFGSVPGSPNGVMDVSFSSDSSNESWSVASSVSSSPEPLTKKSRAKDQSLESASHSNFLDIPR | 348 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 4726293 | 4728485 | - | MC08g0585 | Mch8g0665 | 694286 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g0665 | 348 | CDD | CYCLIN_AtCycD-like_rpt2 | 180 | 271 | - | - | |
Mch8g0665 | 348 | ProSitePatterns | Cyclins signature. | 78 | 109 | IPR048258 | - | |
Mch8g0665 | 348 | Gene3D | - | 179 | 269 | - | - | |
Mch8g0665 | 348 | SUPERFAMILY | Cyclin-like | 162 | 288 | IPR036915 | - | |
Mch8g0665 | 348 | SMART | cyclin_7 | 83 | 171 | IPR013763 | - | |
Mch8g0665 | 348 | FunFam | D3-type cyclin | 71 | 178 | - | - | |
Mch8g0665 | 348 | PANTHER | CYCLINS | 59 | 272 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Mch8g0665 | 348 | SMART | Cyclin_C_2 | 180 | 306 | IPR004367 | - | |
Mch8g0665 | 348 | MobiDBLite | consensus disorder prediction | 298 | 348 | - | - | |
Mch8g0665 | 348 | Gene3D | - | 64 | 178 | - | - | |
Mch8g0665 | 348 | Pfam | Cyclin, N-terminal domain | 69 | 178 | IPR006671 | - | |
Mch8g0665 | 348 | Pfam | Cyclin, C-terminal domain | 180 | 286 | IPR004367 | - | |
Mch8g0665 | 348 | CDD | CYCLIN_AtCycD-like_rpt1 | 77 | 175 | - | - | |
Mch8g0665 | 348 | SUPERFAMILY | Cyclin-like | 47 | 178 | IPR036915 | - | |
Mch8g0665 | 348 | MobiDBLite | consensus disorder prediction | 298 | 324 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch1g1386 | Mch-Chr1:15753203 | Mch8g0665 | Mch-Chr8:4726293 | 4.30E-51 | dispersed | |
Mch8g0255 | Mch-Chr8:1702853 | Mch8g0665 | Mch-Chr8:4726293 | 2.90E-52 | dispersed | |
Mch8g0665 | Mch-Chr8:4726293 | Mch9g2211 | Mch-Chr9:22631366 | 4.58E-33 | dispersed | |
Mch1g1237 | Mch-Chr1:14685965 | Mch8g0665 | Mch-Chr8:4726293 | 1.12E-88 | wgd | |
Mch10g0481 | Mch-Chr10:3122085 | Mch8g0665 | Mch-Chr8:4726293 | 4.76E-101 | wgd | |
Mch11g0329 | Mch-Chr11:2026838 | Mch8g0665 | Mch-Chr8:4726293 | 1.04E-111 | wgd | |
Mch4g0724 | Mch-Chr4:4900652 | Mch8g0665 | Mch-Chr8:4726293 | 2.85E-81 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch8g0665 | K14505 | - | csv:101205442 | 495.352 |