Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0674 ATGTCTAATTATGCCTTCTTGAATGACCAGCTCTCGAAGCGGACCTCCATTTTTGGTTTGCGCTTGTGGGTTGTTCTGGGTATTTGCGTTGGTGCCGCCATTGTCATCGTTCTCTTCCTCATTTCGCTATGGTTCACCTCCAGGCGCAACAGTTCCTCTAAATCTAAGCCCTCTCTGAACCCCACTATCCCAAATGTCTCCAAGGAAATCCAGGAAATACGAATCGACCATTCGCGGAACCCAACTCATTCTGACCCAAAAGTTCAATTGGCTTCTAATCCTGAGCCGTTGCCGGAGGCAGAGCCTTTGGCCACTCTGCTTCAGACGGAAGAAGGGAGCCCAGTGAGTGGGCGTCATAGAATTCACATTGAAATTGGGAAGGACCACCGGATTTCGTACCCGGAGAAAGGCGGCGGTTCGTCCCACGGCAGCGGAGAAGCTCGGTCAGGCGATCAGGCACCGTTGGCTGTGCCAGAGGTATCGCATTTGGGTTGGGGACATTGGTACACTCTCAGAGAGCTGGAGTATTCTACTAATGGTTTTGCGGATGAAAATGTGATTGGTGAGGGTGGATATGGTATTGTCTACCGTGGTGTTCTCGAGGACAATACTATTGTAGCTGTAAAAAATTTGCTCAATAACAGGGGACAGGCTGAGAAGGAGTTTAAGGTTGAAGTGGAAGCAATTGGACGTGTTCGGCACAAGAATCTGGTGCGTTTGCTCGGCTATTGTGCTGAAGGAGCTCATAGGATGCTTGTTTACGAGTACATTGATAATGGAAACTTGGAACAGTGGCTTCATGGAGAAGTTGGACCTTGTAGCCCTCTCACATGGGACATTCGAATGAATATAATTGTTGGAACAGCAAAGGGGTTAACCTACCTGCACGAGGGGCTTGAGCCTAAGGTGGTTCACCGTGATATCAAGTCAAGTAACATTTTGCTCGACAAGCAATGGAATCCAAAGGTCTCTGACTTCGGCCTAGCAAAGCTTCTCGGCTCAGAGAGGAGTTATGTGACAACCCGTGTGATGGGAACTTTCGGATATGTAGCTCCAGAATATGCTAGTACTGGCATGTTAAATGAAAAAAGTGATGTATATAGTTTCGGTATTCTCATTATGGAGATAATTTCAGGGAGAAATCCAGTAGATTATAGCCGCCCTCCAGGAGAGGTGAACCTAGTTGAGTGGCTTAAAACAATGGTTAGTAATCGAAACGCAGAGGGAATTTTGGATCCAAAGTTGCCTGAGAAGCCTTCAACAAGGGCTCTTAAACGTGCTCTGTTAGTAGCTTTACGGTGCGTGGATCCTAACATTCAGAAGAGGCCGAAAATGGGGCATGTAATTCATATGCTTGAAGCTGACGAGTTTCCTTTCCGAGATGATCGTAGAGTGGGACGGGAACCGGGACGATCGCTTCTAAAGGAAAGGCTCATGGAAAGGCTTGTGAGTGAATCTGGAGACAGCAGTGGATATGAAAGTGGAGCAACCCAAGCAAGCCAACATCTATGGAGAAAGCAAGAACTTGAAGAACAACAGCCTCGTGAACCTCACACTTTAAGGTGA 1566 47.38 MSNYAFLNDQLSKRTSIFGLRLWVVLGICVGAAIVIVLFLISLWFTSRRNSSSKSKPSLNPTIPNVSKEIQEIRIDHSRNPTHSDPKVQLASNPEPLPEAEPLATLLQTEEGSPVSGRHRIHIEIGKDHRISYPEKGGGSSHGSGEARSGDQAPLAVPEVSHLGWGHWYTLRELEYSTNGFADENVIGEGGYGIVYRGVLEDNTIVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGEVGPCSPLTWDIRMNIIVGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKVSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYASTGMLNEKSDVYSFGILIMEIISGRNPVDYSRPPGEVNLVEWLKTMVSNRNAEGILDPKLPEKPSTRALKRALLVALRCVDPNIQKRPKMGHVIHMLEADEFPFRDDRRVGREPGRSLLKERLMERLVSESGDSSGYESGATQASQHLWRKQELEEQQPREPHTLR 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4797631 4800913 + MC08g_new0088 Mch8g0674 694295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0674 521 Gene3D Phosphorylase Kinase; domain 1 159 256 - -
Mch8g0674 521 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g0674 521 Gene3D Transferase(Phosphotransferase) domain 1 257 463 - -
Mch8g0674 521 Pfam Protein kinase domain 183 449 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0674 521 SUPERFAMILY Protein kinase-like (PK-like) 165 453 IPR011009 -
Mch8g0674 521 MobiDBLite consensus disorder prediction 131 153 - -
Mch8g0674 521 ProSitePatterns Protein kinases ATP-binding region signature. 187 209 IPR017441 GO:0005524(InterPro)
Mch8g0674 521 CDD STKc_IRAK 187 453 - -
Mch8g0674 521 PANTHER OS01G0323000 PROTEIN 6 490 IPR052232 -
Mch8g0674 521 FunFam Putative receptor-like serine/threonine-protein kinase 257 467 - -
Mch8g0674 521 MobiDBLite consensus disorder prediction 504 521 - -
Mch8g0674 521 ProSiteProfiles Protein kinase domain profile. 181 439 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0674 521 MobiDBLite consensus disorder prediction 482 521 - -
Mch8g0674 521 FunFam Probable serine/threonine-protein kinase At1g01540 161 256 - -
Mch8g0674 521 MobiDBLite consensus disorder prediction 487 503 - -
Mch8g0674 521 SMART serkin_6 181 459 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0127 Mch-Chr10:747553 Mch8g0674 Mch-Chr8:4797631 6.24E-78 dispersed
Mch4g0590 Mch-Chr4:3851061 Mch8g0674 Mch-Chr8:4797631 3.43E-160 dispersed
Mch7g1272 Mch-Chr7:16185821 Mch8g0674 Mch-Chr8:4797631 1.19E-154 dispersed
Mch8g0674 Mch-Chr8:4797631 Mch8g2748 Mch-Chr8:30661916 3.32E-120 dispersed
Mch8g0674 Mch-Chr8:4797631 Mch5g0414 Mch-Chr5:2808800 1.81E-210 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77583 PF00069 Pkinase 2.50E-47 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0674 - - - 0.0