Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g0681 | ATGAATTTCAAGGATTTTGGGAGTGACCCATCCGCCGGAAACGGCGGAGGAGGCGGAAGACCTCCGGCGAACTATCCATTAGCGCGACAATCATCGATCTACTCGCTGACCTTCGATGAGTTTCAGAGTATGGGGAGTATAGGCAAGGATTTCGGGTCAATGAACATGGATGAGCTGTTGAAGAACATTTGGAGCGCCGAAGAAATGCAAACCATGGCATCTTCTGCTGCTGCTGCTGCTGCCAAAGAAGGGGCTGGTAGTGTTGGTGGTACTGGTGGGTATTTGCAGCGACAGGGCTCTTTGACGTTGCCTCGGACACTCAGCCAGAAAAAGGTGGATGAGGTATGGAAGGACATAATAAATGAACATGCTGGGGCAAAAGAAAGCAATACTGTTGCTTCTAATTTGCAACAGAGGCAACAAACTCTTGGGGAGGTGACACTTGAAGAGTTTTTATTCAGAGCTGGAGTGGTGAGAGAGGATACTCAAGTGACGGGAAACACCAACAATGGAGTGTTCTTTGGAAATAACACTGGTTTTGGAATTGGTCTTCAGCGCCAGGCTAAAATTCCGGAGAATAACAATCACCTTCCGATTCAGTCGTCAAACTTATCGTTGAATGTCAATGGAGTTAGAGCACATCAGCCGCAGCCAATATTTCCAAAGCAGACTACTGCTGTGACATATGGATCTCAGTTGCCTTTACCCAGTGATGGTCAGCTGGCTAGTCCAGGGATTAGAGGTGGAATTATGGGGATTTCGGATCAAGGATTGACCTCAAATTTGATGCAAGGCTCTGCTCTGCAGAGTGGAAGGATGGGAGTGGTTAGTTTAGCAGCTGGGCCAATACCGGTTGGAACAGGATCGCCAGCAAACCAACTATCATCAGATGGGATTGGAAAGAGCAATGGTGATACCTCGTCCGTGTCTCCCGTGCCTTATTCGCTTAATGGTGGATTGAGGGGGAGGAGAAGTAATGGGACTGTGGACAAGGTTGTCGAGAGGAGGCAACGGAGAATGATAAAAAACAGAGAGTCAGCTGCTAGATCGCGGGCTCGGAAGCAGGCTTACACAATGGAATTGGAAGCAGAAGTTGCAAAGCTAAAAGAGGAGAACCAAGAACTCCGGCAAAAACAGGAAGAAATCATGGAAATGCAGAAGAACCGGGCATTGGAACTAATGGATAAGCAGCAAGGAATCAAGAAGCGTTGCTTAAGACGAACGCAGACTGGACCGTGGTGA | 1242 | 48.07 | MNFKDFGSDPSAGNGGGGGRPPANYPLARQSSIYSLTFDEFQSMGSIGKDFGSMNMDELLKNIWSAEEMQTMASSAAAAAAKEGAGSVGGTGGYLQRQGSLTLPRTLSQKKVDEVWKDIINEHAGAKESNTVASNLQQRQQTLGEVTLEEFLFRAGVVREDTQVTGNTNNGVFFGNNTGFGIGLQRQAKIPENNNHLPIQSSNLSLNVNGVRAHQPQPIFPKQTTAVTYGSQLPLPSDGQLASPGIRGGIMGISDQGLTSNLMQGSALQSGRMGVVSLAAGPIPVGTGSPANQLSSDGIGKSNGDTSSVSPVPYSLNGGLRGRRSNGTVDKVVERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELRQKQEEIMEMQKNRALELMDKQQGIKKRCLRRTQTGPW | 413 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 4859697 | 4863904 | - | MC08g0593 | Mch8g0681 | 694302 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g0681 | 413 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 338 | 353 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch8g0681 | 413 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Mch8g0681 | 413 | SUPERFAMILY | Leucine zipper domain | 335 | 384 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch8g0681 | 413 | PANTHER | CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED | 29 | 412 | IPR043452 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro) | |
Mch8g0681 | 413 | MobiDBLite | consensus disorder prediction | 287 | 325 | - | - | |
Mch8g0681 | 413 | Pfam | bZIP transcription factor | 335 | 387 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch8g0681 | 413 | Gene3D | - | 333 | 390 | - | - | |
Mch8g0681 | 413 | MobiDBLite | consensus disorder prediction | 288 | 314 | - | - | |
Mch8g0681 | 413 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 333 | 384 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch8g0681 | 413 | Coils | Coil | 351 | 389 | - | - | |
Mch8g0681 | 413 | CDD | bZIP_plant_BZIP46 | 335 | 387 | - | - | |
Mch8g0681 | 413 | SMART | brlzneu | 331 | 395 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch8g0681 | 413 | FunFam | ABSCISIC ACID-INSENSITIVE 5-like protein 5 | 333 | 390 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch5g1619 | Mch-Chr5:17051282 | Mch8g0681 | Mch-Chr8:4859697 | 1.74E-45 | dispersed | |
Mch6g1051 | Mch-Chr6:7523669 | Mch8g0681 | Mch-Chr8:4859697 | 3.14E-19 | dispersed | |
Mch10g1786 | Mch-Chr10:17619768 | Mch8g0681 | Mch-Chr8:4859697 | 1.58E-13 | transposed | |
Mch11g0801 | Mch-Chr11:5395987 | Mch8g0681 | Mch-Chr8:4859697 | 2.87E-10 | transposed | |
Mch4g1890 | Mch-Chr4:21569061 | Mch8g0681 | Mch-Chr8:4859697 | 1.17E-09 | transposed | |
Mch4g1948 | Mch-Chr4:21971706 | Mch8g0681 | Mch-Chr8:4859697 | 1.46E-36 | transposed | |
Mch4g0700 | Mch-Chr4:4701763 | Mch8g0681 | Mch-Chr8:4859697 | 2.18E-112 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
43811 | PF00170 | bZIP_1 | 2.00E-13 | CL0018 | Mch | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch8g0681 | K14432 | - | csv:101223043 | 665.996 |