Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0681 ATGAATTTCAAGGATTTTGGGAGTGACCCATCCGCCGGAAACGGCGGAGGAGGCGGAAGACCTCCGGCGAACTATCCATTAGCGCGACAATCATCGATCTACTCGCTGACCTTCGATGAGTTTCAGAGTATGGGGAGTATAGGCAAGGATTTCGGGTCAATGAACATGGATGAGCTGTTGAAGAACATTTGGAGCGCCGAAGAAATGCAAACCATGGCATCTTCTGCTGCTGCTGCTGCTGCCAAAGAAGGGGCTGGTAGTGTTGGTGGTACTGGTGGGTATTTGCAGCGACAGGGCTCTTTGACGTTGCCTCGGACACTCAGCCAGAAAAAGGTGGATGAGGTATGGAAGGACATAATAAATGAACATGCTGGGGCAAAAGAAAGCAATACTGTTGCTTCTAATTTGCAACAGAGGCAACAAACTCTTGGGGAGGTGACACTTGAAGAGTTTTTATTCAGAGCTGGAGTGGTGAGAGAGGATACTCAAGTGACGGGAAACACCAACAATGGAGTGTTCTTTGGAAATAACACTGGTTTTGGAATTGGTCTTCAGCGCCAGGCTAAAATTCCGGAGAATAACAATCACCTTCCGATTCAGTCGTCAAACTTATCGTTGAATGTCAATGGAGTTAGAGCACATCAGCCGCAGCCAATATTTCCAAAGCAGACTACTGCTGTGACATATGGATCTCAGTTGCCTTTACCCAGTGATGGTCAGCTGGCTAGTCCAGGGATTAGAGGTGGAATTATGGGGATTTCGGATCAAGGATTGACCTCAAATTTGATGCAAGGCTCTGCTCTGCAGAGTGGAAGGATGGGAGTGGTTAGTTTAGCAGCTGGGCCAATACCGGTTGGAACAGGATCGCCAGCAAACCAACTATCATCAGATGGGATTGGAAAGAGCAATGGTGATACCTCGTCCGTGTCTCCCGTGCCTTATTCGCTTAATGGTGGATTGAGGGGGAGGAGAAGTAATGGGACTGTGGACAAGGTTGTCGAGAGGAGGCAACGGAGAATGATAAAAAACAGAGAGTCAGCTGCTAGATCGCGGGCTCGGAAGCAGGCTTACACAATGGAATTGGAAGCAGAAGTTGCAAAGCTAAAAGAGGAGAACCAAGAACTCCGGCAAAAACAGGAAGAAATCATGGAAATGCAGAAGAACCGGGCATTGGAACTAATGGATAAGCAGCAAGGAATCAAGAAGCGTTGCTTAAGACGAACGCAGACTGGACCGTGGTGA 1242 48.07 MNFKDFGSDPSAGNGGGGGRPPANYPLARQSSIYSLTFDEFQSMGSIGKDFGSMNMDELLKNIWSAEEMQTMASSAAAAAAKEGAGSVGGTGGYLQRQGSLTLPRTLSQKKVDEVWKDIINEHAGAKESNTVASNLQQRQQTLGEVTLEEFLFRAGVVREDTQVTGNTNNGVFFGNNTGFGIGLQRQAKIPENNNHLPIQSSNLSLNVNGVRAHQPQPIFPKQTTAVTYGSQLPLPSDGQLASPGIRGGIMGISDQGLTSNLMQGSALQSGRMGVVSLAAGPIPVGTGSPANQLSSDGIGKSNGDTSSVSPVPYSLNGGLRGRRSNGTVDKVVERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELRQKQEEIMEMQKNRALELMDKQQGIKKRCLRRTQTGPW 413
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4859697 4863904 - MC08g0593 Mch8g0681 694302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0681 413 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 338 353 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch8g0681 413 MobiDBLite consensus disorder prediction 1 26 - -
Mch8g0681 413 SUPERFAMILY Leucine zipper domain 335 384 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch8g0681 413 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 29 412 IPR043452 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro)
Mch8g0681 413 MobiDBLite consensus disorder prediction 287 325 - -
Mch8g0681 413 Pfam bZIP transcription factor 335 387 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch8g0681 413 Gene3D - 333 390 - -
Mch8g0681 413 MobiDBLite consensus disorder prediction 288 314 - -
Mch8g0681 413 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 333 384 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch8g0681 413 Coils Coil 351 389 - -
Mch8g0681 413 CDD bZIP_plant_BZIP46 335 387 - -
Mch8g0681 413 SMART brlzneu 331 395 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch8g0681 413 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 333 390 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g1619 Mch-Chr5:17051282 Mch8g0681 Mch-Chr8:4859697 1.74E-45 dispersed
Mch6g1051 Mch-Chr6:7523669 Mch8g0681 Mch-Chr8:4859697 3.14E-19 dispersed
Mch10g1786 Mch-Chr10:17619768 Mch8g0681 Mch-Chr8:4859697 1.58E-13 transposed
Mch11g0801 Mch-Chr11:5395987 Mch8g0681 Mch-Chr8:4859697 2.87E-10 transposed
Mch4g1890 Mch-Chr4:21569061 Mch8g0681 Mch-Chr8:4859697 1.17E-09 transposed
Mch4g1948 Mch-Chr4:21971706 Mch8g0681 Mch-Chr8:4859697 1.46E-36 transposed
Mch4g0700 Mch-Chr4:4701763 Mch8g0681 Mch-Chr8:4859697 2.18E-112 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43811 PF00170 bZIP_1 2.00E-13 CL0018 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0681 K14432 - csv:101223043 665.996