Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0686 ATGGACGGTGGTGATGGGACAGTCAGGCTCGGAGCTCTGAACTTGAAGCCGGATCGGAGCGGCCTTGATTCGGGTCCCGATGTGTCTGTTTCTTCTCCCGTAACTCGGCAGAAAGCCGCCGCTGCCAAGCAGTTCATAGAGAATCATTACAAGAACTATCTCCAAGGTCTTCAGGATCGTAAAGAGAGACGGAGAACACTTCAACGAAGAGTGCAAGAAGCTCAGATGTCAACTGAGGAACAAGAGGAGATGCTTAGGAGCTTGGAACGCAGAGAAACAGAATTTATGAGACTGCAAAGACGTAAAGTTGGGATCGATGACTTTGAACAATTAACAGTTATCGGTAAAGGTGCATTTGGTGAGGTCAGATTATGTCGTGCAAAAGGAACAGGAGAAATTTTTGCCATGAAGAAGCTGAAGAAATCAGAGATGCTCAGCCGTGGGCAGGTTGAGCATGTTCGTTCTGAGAGGAATTTACTTGCAGAGGTTGATAGTCGGTGCATTGTAAAGCTCTTCTATTCTTTTCAAGATTCCGAATTCTTATACCTTATTATGGAGTATTTACCTGGTGGTGACATTATGACATTACTGATGAGAGAAGACATTCTGTCAGAGGATGTTGCTCGTTTTTACATAGCGGAGAGCATTTTAGCTATTCATTCAATCCATCAGCACAATTATATACATAGGGATATAAAACCAGATAACCTGATACTGGATAAAAATGGCCATCTGAAGCTTTCAGATTTTGGCTTGTGCAAGCCTCTGGATGATAAGTATTCAAGTATACTTTTGAATGACGAAGATTTTACAGCCCAGCAGGCCAAAGGTGAAGTTCAAGGTCATACTGACTCTAATGGATCCCAGTGGATGATGCCAAAAGAACAGATTCAACAGTGGAAGCGTAATCGTCGTGCACTGGCTTTTTCTACTGTTGGGACCCTGGATTATATGGCACCTGAAGTATTGCTTAAGAAAGGATATGGAATGGAGTGTGATTGGTGGTCGTTAGGGGCCATTATGTATGAGATGCTGGCTGGCTATCCTCCTTTTTGTTCTGACGATCCAAGGATGACTTTTCGCAAGATAATAAATTGGAGAACTTGCCTGAAATTTCCCGAGGAACCAAAAATCTCAGAAGAAGCTAAGGACCTGATCAGCCACTTGCTATGTGATGTCGAAATGAGGTTGGGAACACGAGGAGTAGAAGAATTAAAGGCACATCCATGGTTCAAAGGCATCCAGTGGGATAAGCTGTATGAAATGGAAGCTGTGTATAAACCAACCGTCACTGGAGAACTAGACACTCAGAACTTTGAAAAGTTTCCTGAAGTTCAAGACCCTCCATCAGAAATGCCAACTGTTGGACCTTGGAGGAAGATGCTGACTTCAAAAGATACCAATTTCATTGGGTTTACTTTTAAGAAGTCAAACGTCAAATCACTTGAGAGTACAGGTACA 1461 43.05 MDGGDGTVRLGALNLKPDRSGLDSGPDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKERRRTLQRRVQEAQMSTEEQEEMLRSLERRETEFMRLQRRKVGIDDFEQLTVIGKGAFGEVRLCRAKGTGEIFAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLFYSFQDSEFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAIHSIHQHNYIHRDIKPDNLILDKNGHLKLSDFGLCKPLDDKYSSILLNDEDFTAQQAKGEVQGHTDSNGSQWMMPKEQIQQWKRNRRALAFSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLAGYPPFCSDDPRMTFRKIINWRTCLKFPEEPKISEEAKDLISHLLCDVEMRLGTRGVEELKAHPWFKGIQWDKLYEMEAVYKPTVTGELDTQNFEKFPEVQDPPSEMPTVGPWRKMLTSKDTNFIGFTFKKSNVKSLESTGT 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4915948 4920812 + MC08g0596 Mch8g0686 694307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0686 487 SMART pkinase_C_6 412 476 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0686 487 Gene3D Phosphorylase Kinase; domain 1 430 440 - -
Mch8g0686 487 SUPERFAMILY Protein kinase-like (PK-like) 84 463 IPR011009 -
Mch8g0686 487 Gene3D Phosphorylase Kinase; domain 1 74 191 - -
Mch8g0686 487 Pfam Protein kinase C terminal domain 430 474 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0686 487 SMART serkin_6 108 411 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0686 487 MobiDBLite consensus disorder prediction 1 36 - -
Mch8g0686 487 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g0686 487 FunFam Non-specific serine/threonine protein kinase 192 259 - -
Mch8g0686 487 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524(InterPro)
Mch8g0686 487 ProSiteProfiles Protein kinase domain profile. 108 411 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0686 487 Pfam Protein kinase domain 108 411 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0686 487 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 478 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Mch8g0686 487 CDD STKc_NDR_like 106 475 - -
Mch8g0686 487 FunFam Non-specific serine/threonine protein kinase 79 191 - -
Mch8g0686 487 Coils Coil 57 91 - -
Mch8g0686 487 Gene3D Transferase(Phosphotransferase) domain 1 310 429 - -
Mch8g0686 487 ProSiteProfiles AGC-kinase C-terminal domain profile. 412 484 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0686 487 FunFam Non-specific serine/threonine protein kinase 310 429 - -
Mch8g0686 487 Gene3D Transferase(Phosphotransferase) domain 1 192 259 - -
Mch8g0686 487 CDD MobB_NDR_LATS-like 42 103 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g0686 Mch-Chr8:4915948 Mch9g0976 Mch-Chr9:8135716 6.80E-210 dispersed
Mch8g0686 Mch-Chr8:4915948 Mch11g0433 Mch-Chr11:2716606 3.58E-204 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77584 PF00069 Pkinase 1.50E-64 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0686 K08790 - csv:101222805 946.036