Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch8g0687 | ATGGGTGAAATTTTTGTACTCTTCTCCATCTTTCTTCCTACTCTTCTTCTTCTATTACTATTACCTCTAATTTTCTTCAAAAAGGAGAACAACAAAGGCAAGAAGCTGCCTCCTGGTTCCATGGGGTGGCCTCTAATCGGCGAGACCTTCCATCTCTACTCTCGAGATCCGACCATCTTCTTCCTCGACAAACAAAAAAGATATGGGGAAATATTCAAGACCCACATTCATGGATGTCCGTGTGTGATGCTAGCCACGCCAGAGGCGGCTCGGTTCGTGCTGGTGACACAAGCTCACCTCTTCAAGCCCACTTACCCACACGGCAAGGAGCGTCTGATTGGGCCATCGGCTCTGTTTTTCCACCAGAGCGACGCCCATTTGCGCCTCCGGAAGCTGGTTCAGAGCTCCCTCTCACCGGACCCAGTCCGAGCCTTGGTCCCCTATATCGACGCCCTCGCCTCCTCCGCATTGGCCTTCTGGCTCCATGGCCACACCGTCAACACCTTTGAAGAAATGAAAAAGTTCTCTTTTGAAGTCGGAATTTTGGCGATTTTCGGACATTTGGAGGATGATAATTACAGAGATGAGCTAATGAAGAACTACTCCATGGTTAACAGAGGCTACAATTCTTTCCTCACCAACATTCCCGGAACTATTTACAAAAAAGCACTTAAAGCAAGGAAGAGGCTGGGAGAGATCATAAGCTGTATTATCTCTGAGAAAAGGCAGAATACGACGAAGAAATTGGCGGAGAAGAATCTGCTGGGTTGTTTGCTGAAATGGAGAGATGAAAAAGGAGAAACTTTAAGTGATGAACAGATCGCCGACAACTTAATCGGAGTTCTCTTCGCCGCTCAGGACACGACGGCGAGTGTTCTCACATGGGTTCTTAAATATCTCCATGATAACCGCAAAGTTCTACAAGCTGTGAAGGCAGAGCAGAAGGCGATAGAAGAAGCCATTAATGGAGGGAGCCGACCAATGAGCTGGTCTCACACACGAAACATGCCATTTACCAACAAGGTGGTGTTAGAGAGCTTGAGAATGGCGAGTATAATAACATTCACTTTCAGAGAAGCTGTGGCAGATGTTGAATACAATGGATATTTAATTCCAAAGGGTTGGAAAGTAATGCCTTTATTCAGTAATATTCATCACAATTCTGAATACTTTGTTGACCCTCACAAATTTGATCCTTCAAGATTTGAGGTTGCTCCAAGACCCAATACGTTCATGCCATTTGGCAGTGGGGTCCATGCCTGCCCTGGAAATGAGCTTGCCAAGCTTGAAATCTTGATCATGATCCACCACCTAGTCACCAAATTCAGATGGGAATTTGCAGGGCGGGGAGATGGGATTCATCATGGGCCATTTCCAGTTCCATTGGATGGGCTTCCAATCAGAGTCTGGAGATTATCCAACTGA | 1425 | 46.32 | MGEIFVLFSIFLPTLLLLLLLPLIFFKKENNKGKKLPPGSMGWPLIGETFHLYSRDPTIFFLDKQKRYGEIFKTHIHGCPCVMLATPEAARFVLVTQAHLFKPTYPHGKERLIGPSALFFHQSDAHLRLRKLVQSSLSPDPVRALVPYIDALASSALAFWLHGHTVNTFEEMKKFSFEVGILAIFGHLEDDNYRDELMKNYSMVNRGYNSFLTNIPGTIYKKALKARKRLGEIISCIISEKRQNTTKKLAEKNLLGCLLKWRDEKGETLSDEQIADNLIGVLFAAQDTTASVLTWVLKYLHDNRKVLQAVKAEQKAIEEAINGGSRPMSWSHTRNMPFTNKVVLESLRMASIITFTFREAVADVEYNGYLIPKGWKVMPLFSNIHHNSEYFVDPHKFDPSRFEVAPRPNTFMPFGSGVHACPGNELAKLEILIMIHHLVTKFRWEFAGRGDGIHHGPFPVPLDGLPIRVWRLSN | 474 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 4931201 | 4935723 | + | MC08g0597 | Mch8g0687 | 694308 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch8g0687 | 474 | SUPERFAMILY | Cytochrome P450 | 33 | 470 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g0687 | 474 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 414 | 423 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch8g0687 | 474 | PANTHER | CYTOCHROME P450 26 | 35 | 447 | - | GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Mch8g0687 | 474 | PRINTS | E-class P450 group I signature | 340 | 358 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g0687 | 474 | PRINTS | E-class P450 group I signature | 380 | 404 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g0687 | 474 | PRINTS | E-class P450 group I signature | 65 | 84 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g0687 | 474 | PRINTS | E-class P450 group I signature | 421 | 444 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g0687 | 474 | PRINTS | E-class P450 group I signature | 273 | 290 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g0687 | 474 | PRINTS | E-class P450 group I signature | 411 | 421 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g0687 | 474 | PRINTS | P450 superfamily signature | 421 | 432 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g0687 | 474 | PRINTS | P450 superfamily signature | 341 | 352 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g0687 | 474 | PRINTS | P450 superfamily signature | 284 | 301 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g0687 | 474 | PRINTS | P450 superfamily signature | 412 | 421 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g0687 | 474 | Pfam | Cytochrome P450 | 37 | 447 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g0687 | 474 | FunFam | Abscisic acid 8 | 26 | 471 | - | - | |
| Mch8g0687 | 474 | CDD | CYP90-like | 65 | 469 | - | - | |
| Mch8g0687 | 474 | Gene3D | Cytochrome P450 | 26 | 472 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch3g0200 | Mch-Chr3:2628131 | Mch8g0687 | Mch-Chr8:4931201 | 3.34E-173 | dispersed | |
| Mch6g1342 | Mch-Chr6:11138427 | Mch8g0687 | Mch-Chr8:4931201 | 4.83E-74 | dispersed | |
| Mch8g0687 | Mch-Chr8:4931201 | Mch9g1476 | Mch-Chr9:17187767 | 1.16E-73 | dispersed | |
| Mch11g0286 | Mch-Chr11:1784827 | Mch8g0687 | Mch-Chr8:4931201 | 1.04E-231 | wgd | |
| Mch4g0691 | Mch-Chr4:4614509 | Mch8g0687 | Mch-Chr8:4931201 | 2.80E-210 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch8g0687 | K09843 | - | vvi:100245540 | 670.233 |