Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0706 GTTAACGGTCGACTCGTTCCAATAAATTTGCTTACTGTACGAAGATTATATTCGATTTTCCCCAAATATACCGAACCTGCTCGTCTTCTTCGCGGTTCATCTTCCCCCTGCTTCTGTTCTGCTGCAAACAGAGATCAAACCCTAGGAATCGAGGAAGAAGAGATGGGGATCGCTAACCTCTCATACGAGGAATGTCGTCGCAAGAGACTCGAAGAAAACAAGAAGAGAATGGAAGCCCTAAATTTGCCCTTGCTTTCTCAGGCTCTCCTTGATTCTTCCCCTTCCAAGTCTTCTCCTAGTAAGCTGGCCAAGCCTCGCGTGACGCAGAAACAATTGGTGGTGGTGAGGAGGTCCAGTCGCGTAGCAAAACAATCAGCTCCTGTTTACGCTGAAGTTCTTGTCAAACGCGTGGTGATTCCAAGAAGGATCTCCAAAGCTAGAGATGTTTCAAACCGAGTTTATGCTTCGGATGAATCTAGAAAAAATGCCTTTGAAAGAGCAGAGAAACTTCAATCTGGGTTGGAACGGAATCATCCCAACTTTATAAAGTCAATGCTTCAGTCTCATGTCAGTGGTGGATTCTGGCTGGGCCTTCCTTCTCACTTCTGCAAGATGCACCTTCCAAATCGTGATGGAGTAATGACTTTAATAGACGAAGATGGCGATGAGTATCCAACAGTATATTTGGCACGAAAAACAGGACTTAGTGGCGGATGGAAGGGTTTTTCAGTTGCTCACAAATTGGCAGATGGGGATGCTGTAGTTTTTCAACTCATTAAACCAACAACCTGCAAGGTGTACATCCTCAGGGCGAATAGTTCCAGAGAAGATAGTGATTCTAACAGTAGCTAA 852 44.95 VNGRLVPINLLTVRRLYSIFPKYTEPARLLRGSSSPCFCSAANRDQTLGIEEEEMGIANLSYEECRRKRLEENKKRMEALNLPLLSQALLDSSPSKSSPSKLAKPRVTQKQLVVVRRSSRVAKQSAPVYAEVLVKRVVIPRRISKARDVSNRVYASDESRKNAFERAEKLQSGLERNHPNFIKSMLQSHVSGGFWLGLPSHFCKMHLPNRDGVMTLIDEDGDEYPTVYLARKTGLSGGWKGFSVAHKLADGDAVVFQLIKPTTCKVYILRANSSREDSDSNSS 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5021858 5024517 - MC08g0614 Mch8g0706 694327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0706 283 SMART B3_2 181 272 IPR003340 GO:0003677(InterPro)
Mch8g0706 283 Coils Coil 60 80 - -
Mch8g0706 283 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 61 275 IPR044837 -
Mch8g0706 283 Pfam B3 DNA binding domain 181 271 IPR003340 GO:0003677(InterPro)
Mch8g0706 283 Gene3D - 155 273 IPR015300 -
Mch8g0706 283 SUPERFAMILY DNA-binding pseudobarrel domain 175 272 IPR015300 -
Mch8g0706 283 ProSiteProfiles B3 DNA-binding domain profile. 181 272 IPR003340 GO:0003677(InterPro)
Mch8g0706 283 CDD B3_DNA 179 270 IPR003340 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0509 Mch-Chr10:3333702 Mch8g0706 Mch-Chr8:5021858 7.10E-40 dispersed
Mch8g0706 Mch-Chr8:5021858 Mch8g0707 Mch-Chr8:5029350 4.32E-130 tandem
Mch4g0683 Mch-Chr4:4561040 Mch8g0706 Mch-Chr8:5021858 1.19E-73 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43812 PF02362 B3 3.40E-14 CL0405 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0706 - - - 0.0