Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0707 ATGGGGGTGGCTAATCTCTCGTACGAGGAATGTCGTCGCAAGAGACTCGAAGAAAACAAGAAGAGAATGGAAGCCCTAAATTTGCCCTTGCTTTCTCAGGCTCTCCTCGATTCTTCCCCTTCCAAATCCTCCCCAAGCAAGTTGGGCAAGCCTCGTGTCACTCAGAAACAGCTGGTGGTGGTGAGGAGATCCAGTCGCGTAGCAAAACAATCAGCCCCTGTTTACGCTGAAGTTCTTATCAATCGCGTGGTGATTCCTAGAAGGACCTCCAGAGCTAGAGATTTTTCAAACCAGTTTTATGCTTCGGATGAAGCAAGAAAAAATGCCTTTGAAAGAGCAGAGCAACTTCAATCTGGGTTGGAGCCGAATTATCCCAGCTTTATAAAGTCAATGGTTCGATCTCATGTTAGTGGTTGTTTCTGGCTGGGGCTTCCTGCTCATGTCTGCAAGACAATCCTTCCAAATCGTGATGGAGTTATGACTTTAATAGATGAAGATGGCGATGAGTATCCAACAATATATTTGGCCCGAAAAACAGGACTTAGTGGCGGATGGAAGGGTTTTTCAATTGCTCATAAATTGGGAGATGGGGATGCTGTGGTTTTTCAGCTCATTAGACCTACAACCTGCAAGGTGATTGCACTTCATCTCTTTACTGGATTCACAATCCTT 672 45.39 MGVANLSYEECRRKRLEENKKRMEALNLPLLSQALLDSSPSKSSPSKLGKPRVTQKQLVVVRRSSRVAKQSAPVYAEVLINRVVIPRRTSRARDFSNQFYASDEARKNAFERAEQLQSGLEPNYPSFIKSMVRSHVSGCFWLGLPAHVCKTILPNRDGVMTLIDEDGDEYPTIYLARKTGLSGGWKGFSIAHKLGDGDAVVFQLIRPTTCKVIALHLFTGFTIL 224
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 5029350 5030498 - MC08g0615 Mch8g0707 694328
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0707 224 Gene3D - 101 219 IPR015300 -
Mch8g0707 224 Pfam B3 DNA binding domain 127 216 IPR003340 GO:0003677(InterPro)
Mch8g0707 224 Coils Coil 6 26 - -
Mch8g0707 224 CDD B3_DNA 125 210 IPR003340 GO:0003677(InterPro)
Mch8g0707 224 ProSiteProfiles B3 DNA-binding domain profile. 127 219 IPR003340 GO:0003677(InterPro)
Mch8g0707 224 SMART B3_2 127 213 IPR003340 GO:0003677(InterPro)
Mch8g0707 224 SUPERFAMILY DNA-binding pseudobarrel domain 121 214 IPR015300 -
Mch8g0707 224 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 12 212 IPR044837 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1364 Mch-Chr2:9791644 Mch8g0707 Mch-Chr8:5029350 1.60E-30 dispersed
Mch4g0683 Mch-Chr4:4561040 Mch8g0707 Mch-Chr8:5029350 5.13E-66 dispersed
Mch8g0706 Mch-Chr8:5021858 Mch8g0707 Mch-Chr8:5029350 4.32E-130 tandem
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43813 PF02362 B3 3.00E-11 CL0405 Mch TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0707 - - - 0.0