Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0724 ATGCCTTTCTTTCACAAAAGCCATTCGAATTCTCGGCTGCAACAGAAGGCACCGGTTTCTGAATTTTCCGTTGGCCTGCCGGAACCGCTGTCTCAGCGGCGGCTCACGCGGCAGAGGAAGCTCAGGCATCTCACGGATCGAGACGTTGGCTTCGAATTCCACGAACAGCCCCGATCATTTCCCAATTCCCCCGATTTATCGGCAAAACCTAAATCGCCTCTTGGTGGTTCGGCACGCTGGTCCTCGTCCGCTGCTCCGCCCCAGCCTCTGCCTCTGCCTGACCTGTTTCCGAAGAATCCAGATTGCGGCTCTTGGAGCTCCGGCCAGGGCCGTGTTGGATCGCCGATCGAAGCTCCGGTCCTTCGTAATTCTGCTCTGCAAACTGTCAGGAAGGGCGCTGATCAGGGGGCAACAAATGTGAGTAAAAGCTTGGCCAACAATCAAAGGCGAGTTGCCGTAGATTTAACCTTAGAAGTTGTTAATGGCAATACAGGATGGAGTGGTGGTACCACATTTAGAGGCCCTCAAAGCCTCTCTGTGAACTCAGGGAGATCGAATAAGGAATTTTTTTTCAGTTGTTTGGATTACCCTCACAACATCAAAGGCAGGGGATCCCCAACTCATCTGAATCTTGAAAGGGGTAACCATAATTGGACCCCGAAATCTTCCTCGAGGAGTGCGCCAACAAGCATTTTACCGAGTCCTGCCGTGAGCCCTCGAAGAGCATACACCGGAGATATCTTTGCTTCTGGTTTGACTCGCCACGAACATCAGGAATCTGCTTCCACTATTTCTCCCAAGGTAGCACCCCTAAAAACTGCTCCTAGTTCTCAGTATTCTCCTCTCCACAGCCCGACAGCTCGAAGTTCCATAAGCAATCATAGATCTTCTAATGATATGCCATTTCCTCTGCATCATAAGTTACAAAACGATAGTAGTATAGATCGGTCTGAAAACCATGGTCACGTCAATGCCCACCCATTGCCTCTTCCTCCTCCATTAGTAGCCTCTTCACAACCATCTCCACAATCTCATCCGCCCAATGTTCATAATTTTATTGAAAAGCCACATATTTCATCTATGAAAGGTCAGTGGCAGAAAGGAAAGCTTATTGGGCGCGGTACATTCGGAAGTGTTTATCTTGCAACCAACAAAGAGACTGGAGCTTTATGTGCAATGAAAGAAGTTGACCTCATTCCCGATGATCCTAAATCTGCTGAATGTTTAAAGCAACTAGAGCAGGAAATTAAAGTTCTCAGTCAACTTAAACATCCAAATATTGTACAGTATTATGGAAGTGAAACAATTGATGATCATTTCTACATATATTTGGAGTATGTTTATCCTGGTTCAATAAATAAATATGTCCGTGAACGTTGTGGAGCTATTACAGAATCAATTGTTCGCAATTTCACCCGCCATATTCTCTCTGGACTGGCTTACTTGCATAGCACAAAAACAATTCACAGGGATATCAAAGGTGCAAACTTACTAGTCGACTCATCGGGTGTTGTCAAACTTGCAGATTTTGGGATGGCAAAACATCTCTCAGGGCAGTATGATCTCTCTTTAAAGGGTAGTCCATACTGGATGGCTCCTGAGGTCATAAAGGCTGCTATGTTGAAAGATGCCAACCCTGATCTTGCCTTGGCAGTTGACATATGGAGTCTGGGTTGCACCATAATCGAAATGCTGAATGGAAAACCTCCCTGGAGTGAGTTTGAAGGGCATCAAGCTATGTTCAAGGTGTTGAATAAAACCCCAGCTATCCCGGAAAAGCTATCTCCAGAAGGGAAAGACTTCCTCCAGTGTTGCTTTGAAAGGAATCCAGCCGATAGACCAACAGCCATGGTGCTCCTCGACCATCCTTTCTTAAGATCTTCAAATGACTCTAATCTTCCAATCCCCACATCAGCATTTTCAACAATGAACCTCTTGGAAAAATTATTGAGTCCAAAGGACCGCCTTAATCCCAAAGGAGATCAGACGCAGAACTCTCCCGGAAATTCGGTCAAGAATGATTATCTATCATGTCGTAGCCCTTCAACGAACATCTCGAGCAATATTCCCGCTGGTGCTGCTAACAACCATCACTTTGCTCTTTCAAGGACTCATAAGAGGGAAGTGCCGCACCTCTGA 2139 46.19 MPFFHKSHSNSRLQQKAPVSEFSVGLPEPLSQRRLTRQRKLRHLTDRDVGFEFHEQPRSFPNSPDLSAKPKSPLGGSARWSSSAAPPQPLPLPDLFPKNPDCGSWSSGQGRVGSPIEAPVLRNSALQTVRKGADQGATNVSKSLANNQRRVAVDLTLEVVNGNTGWSGGTTFRGPQSLSVNSGRSNKEFFFSCLDYPHNIKGRGSPTHLNLERGNHNWTPKSSSRSAPTSILPSPAVSPRRAYTGDIFASGLTRHEHQESASTISPKVAPLKTAPSSQYSPLHSPTARSSISNHRSSNDMPFPLHHKLQNDSSIDRSENHGHVNAHPLPLPPPLVASSQPSPQSHPPNVHNFIEKPHISSMKGQWQKGKLIGRGTFGSVYLATNKETGALCAMKEVDLIPDDPKSAECLKQLEQEIKVLSQLKHPNIVQYYGSETIDDHFYIYLEYVYPGSINKYVRERCGAITESIVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDSSGVVKLADFGMAKHLSGQYDLSLKGSPYWMAPEVIKAAMLKDANPDLALAVDIWSLGCTIIEMLNGKPPWSEFEGHQAMFKVLNKTPAIPEKLSPEGKDFLQCCFERNPADRPTAMVLLDHPFLRSSNDSNLPIPTSAFSTMNLLEKLLSPKDRLNPKGDQTQNSPGNSVKNDYLSCRSPSTNISSNIPAGAANNHHFALSRTHKREVPHL 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5136400 5142033 - MC08g0631 Mch8g0724 694345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0724 712 Gene3D Transferase(Phosphotransferase) domain 1 362 656 - -
Mch8g0724 712 MobiDBLite consensus disorder prediction 205 239 - -
Mch8g0724 712 ProSiteProfiles Protein kinase domain profile. 365 625 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0724 712 MobiDBLite consensus disorder prediction 651 677 - -
Mch8g0724 712 MobiDBLite consensus disorder prediction 210 233 - -
Mch8g0724 712 SUPERFAMILY Protein kinase-like (PK-like) 360 643 IPR011009 -
Mch8g0724 712 FunFam Mitogen-activated protein kinase kinase kinase 5 362 662 - -
Mch8g0724 712 ProSitePatterns Protein kinases ATP-binding region signature. 371 394 IPR017441 GO:0005524(InterPro)
Mch8g0724 712 MobiDBLite consensus disorder prediction 1 111 - -
Mch8g0724 712 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 31 630 IPR050538 -
Mch8g0724 712 MobiDBLite consensus disorder prediction 657 677 - -
Mch8g0724 712 MobiDBLite consensus disorder prediction 255 299 - -
Mch8g0724 712 SMART serkin_6 365 625 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0724 712 Pfam Protein kinase domain 366 625 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0724 712 MobiDBLite consensus disorder prediction 255 347 - -
Mch8g0724 712 MobiDBLite consensus disorder prediction 326 340 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2443 Mch-Chr6:26371577 Mch8g0724 Mch-Chr8:5136400 1.18E-101 dispersed
Mch8g0724 Mch-Chr8:5136400 Mch8g2856 Mch-Chr8:31430138 7.79E-61 dispersed
Mch1g1196 Mch-Chr1:14334790 Mch8g0724 Mch-Chr8:5136400 6.96E-163 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77585 PF00069 Pkinase 2.10E-69 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0724 - - - 0.0