Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g0752 | ATGACCTCCGATGGCGCCACTTCTGCCTCCACTTGCAGGCGGAAGCCCTCCTGGAGGGAGCGGGAGAATAACCGCACCAGAGAGCGCCGGAGGAGAGCCATCGCCGCTAAAATTTACTCCGGACTTAGGGCTCAGGGCAACTTCAATTTGCCTAAACATTGTGACAATAACGAGGTCCTTAAAGCTCTCTGTGCTGAAGCTGGTTGGACCGTCGAAGAAGACGGAACCACTTATCGGAAGGGATGCAAGCCACCCCCGCTCGATATTGTTGGGACTTCCGCCAAAATTACCCCCTACTCTTCCCAGAATCCAAGCCCATTGTCGTCTTCATTCCCTAGCCCAATCCCATCCTACCAAGTCAGCCCCTCCTCCTCCTCTTTTCCAAGCCCGTCCCGTTTCGATGCCAACAATCCATCGAACCTCATTCCGTATCTTCGCCAAGCGATTCCCATATCTCTTCCTCCTCTTAGAATCTCAAACAGTGCTCCTGTGACCCCTCCCCTTTCATCCCCAGCCTCAAGGACTCCCCAGCCATTCCCCAACTGGGAGGTCACTGCTAAAGAATCCTTGTCCTTAAATTATCCTTTCTTTGCTGTATCTGCTCCAGCTAGCCCGACTCGCCCTCAGCTCCATACTCCTGCCACAATCCACGAATGCGATGAGTCTGAATCATCCACCAATGATTCCAGTCCATGGGCACTTCTTCGCGCCTATGCGCCTTCTGCATCGACAGTGCCAACGTCCCCCACGTTCAACCTTGTGAAACCTGCCAATCAGCATGTTCTGCACAGTGATTTCATCAAAGAAAGCGGGAGAGGAAATGAATTCGAGTTCTTGGGCTGCAAGGTTAAGCCCTGGGAAGGGGAGAAGATACATGAAGTTGGATTGGAGGATTTAGAACTCACACTCGGTAGCGGTAAGACCCGAATCTAA | 933 | 52.41 | MTSDGATSASTCRRKPSWRERENNRTRERRRRAIAAKIYSGLRAQGNFNLPKHCDNNEVLKALCAEAGWTVEEDGTTYRKGCKPPPLDIVGTSAKITPYSSQNPSPLSSSFPSPIPSYQVSPSSSSFPSPSRFDANNPSNLIPYLRQAIPISLPPLRISNSAPVTPPLSSPASRTPQPFPNWEVTAKESLSLNYPFFAVSAPASPTRPQLHTPATIHECDESESSTNDSSPWALLRAYAPSASTVPTSPTFNLVKPANQHVLHSDFIKESGRGNEFEFLGCKVKPWEGEKIHEVGLEDLELTLGSGKTRI | 310 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 5326403 | 5328537 | + | MC08g0657 | Mch8g0752 | 694373 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g0752 | 310 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Mch8g0752 | 310 | MobiDBLite | consensus disorder prediction | 14 | 29 | - | - | |
Mch8g0752 | 310 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 12 | 309 | IPR033264 | GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro) | |
Mch8g0752 | 310 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 13 | 136 | IPR008540 | - | |
Mch8g0752 | 310 | MobiDBLite | consensus disorder prediction | 94 | 132 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch3g1052 | Mch-Chr3:14102456 | Mch8g0752 | Mch-Chr8:5326403 | 5.59E-57 | dispersed | |
Mch1g1478 | Mch-Chr1:16329458 | Mch8g0752 | Mch-Chr8:5326403 | 9.23E-114 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
43819 | PF05687 | BES1_N | 1.60E-62 | No_clan | Mch | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch8g0752 | K14503 | - | csv:101219853 | 508.834 |