Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0797 ATGGCGACGCCAGTTGAGCCTCCAAACGGGATTAGGTCACAAGGGAAGCATTACTTCTCAATGTGGCAGACATTGTTTGAGATTGATACGAAATATGTACCGATCAAGCCTATTGGTCGAGGGGCATACGGGATTGTGTGTTCTTCTGTGAATAGGGAAACAAATGAAAAAGTTGCGATAAAGAGGATACACAATGCCTTTGAGAACCGCATCGATGCCCTCAGGACTTTGCGCGAATTGAAGCTCCTTAGGCATCTTCGCCATGAAAATGTGATATGCTTGAAAGATGTGATGATGCCCATCCATAGGAGGAGTTTCAAAGATGTTTATTTGGTTTATGAACTGATGGACACGGATCTACATCAGATTATTAAGTCTTCTCAAACTCTTACCAATGACCACTGCCAATATTTCCTCTTTCAGTTGCTTCGAGGCCTAAAGTATCTGCACTCAGCAAACATTCTACATCGCGACTTGAAGCCCGGGAACCTCCTTGTCAATGCAAATTGTGATCTCAAGATATGCGATTTCGGGTTGGCGCGTACAAGCAACGGCAAGAATCAGTTTATGACAGAGTATGTTGTAACTCGCTGGTATCGGGCCCCGGAACTGCTGCTCTGCTGTGAGAATTATGGGACATCAATTGATGTGTGGTCTGTAGGATGCATCTTTGCGGAGCTTCTCGGTAGGAAACCTATCTTCCCCGGCACCGAATGTTTGAACCAATTGAAGTTGATAATTAACATACTGGGTAGCCAGAGAGAGGAAGACCTTGAGTTCATAGACAATCCAAAGGCAAGGAAGTATATTAAATCTCTCCCGTACTCTCCCAGGGCTCCCCTCAACCGTCTTTATCCGAATGCTCATCCTCTCGCAATTGATCTTCTTCAAAAGATGCTTGTTTTCGACCCATCAAAGCGAATCAGTGTCACTGAAGCACTGCAGCATCCATACATGTCCCCACTGTATGATCCAAACAGCAATCCTCCAGCTCAGGTACCCATCGATCTCCACATTGATGAGGAACTCGGAGAAGAAATGATACGAGAGATGATGTGGAAAGAAATGCTTCATTACCACCCCGAAGATCTCGAAGAACATGCCGAAATGACTTGTTACCACCCCGAGCCTGCTACGGGGAGTACCGTGGTGTATTCTTGA 1161 45.56 MATPVEPPNGIRSQGKHYFSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKRIHNAFENRIDALRTLRELKLLRHLRHENVICLKDVMMPIHRRSFKDVYLVYELMDTDLHQIIKSSQTLTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCENYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSQREEDLEFIDNPKARKYIKSLPYSPRAPLNRLYPNAHPLAIDLLQKMLVFDPSKRISVTEALQHPYMSPLYDPNSNPPAQVPIDLHIDEELGEEMIREMMWKEMLHYHPEDLEEHAEMTCYHPEPATGSTVVYS 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5630872 5634823 + MC08g0698 Mch8g0797 694418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0797 386 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0797 386 Pfam Protein kinase domain 34 319 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0797 386 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 26 357 IPR050117 GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Mch8g0797 386 CDD STKc_TEY_MAPK 26 361 - -
Mch8g0797 386 Gene3D Phosphorylase Kinase; domain 1 19 355 - -
Mch8g0797 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g0797 386 SMART serkin_6 32 319 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0797 386 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Mch8g0797 386 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g0797 386 SUPERFAMILY Protein kinase-like (PK-like) 24 326 IPR011009 -
Mch8g0797 386 FunFam Mitogen-activated protein kinase 18 126 - -
Mch8g0797 386 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524(InterPro)
Mch8g0797 386 FunFam Mitogen-activated protein kinase 116 345 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0774 Mch-Chr10:5386568 Mch8g0797 Mch-Chr8:5630872 1.34E-208 dispersed
Mch7g0643 Mch-Chr7:11080539 Mch8g0797 Mch-Chr8:5630872 7.96E-141 dispersed
Mch8g0797 Mch-Chr8:5630872 Mch9g1264 Mch-Chr9:14505988 1.54E-102 dispersed
Mch8g0797 Mch-Chr8:5630872 Mch8g0123 Mch-Chr8:720477 2.11E-137 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77588 PF00069 Pkinase 1.00E-71 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0797 K20535 - csv:101213478 764.222