Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0813 ATGGCGGACGTCGGGTCGGTCTCCGACAAGAGAATGTCGTGTTCCATACCGGAGAGGTTCCAGCTCCACGCTGCCATGCTGGCCTTGCAATTCGGCTACGCCGGTTTTCATGTCGTCTCTAGAGCTGCCCTCAACATGGGAATCAGTAAACTCGTCTTCCCCGTCTACCGAAACGTCATCGCTTTGCTCCTCCTCCTCCCCTTCGCATATTTTATCGAAAAGAAGGATAGGCCTGCGCTCACTCTCAACTTCGTCATTCAGTTCTTCTTCCTCGCTCTTGTTGGAATCACAGCCAACCAAGGGTTTTACTTGCTGGGTTTGGATAATACTTCCCCCACCTTTGCATCTGCCATACAGAATTCTGTTCCTGCCATTACGTTCCTCATGGCTGCACTTCTCAGGATAGAGCAGGTGAGACTGAACCGAAAAGACGGCATAGCGAAGGTGTTGGGAACTCTATGCTGCGTGGCCGGAGCCACGGTGATCACACTGTACAAAGGTCCAACCATATACAGCCCGGCCACGACGGCGACGGTGACGCTGCAGGGCACGGCGGCCGTGGCTGCGACGGGAGGAATGTTTCCGTCACTAGGGGACGCAAAGGGAAAGAGCTGGACCCTGGGCTGCGTCTACTTAATCGGCCACTGTTTGTCGTGGTCGGCGTGGCTGGTCCTGCAAGCGCCGGTGCTTAAAAAATACCCGGCGCGGCTCTCCGTCACCTCCTTCACCTGCTTCTTCGGCCTCATCCAATTCTTCATCATCGCCGTCGCCTTCGAGCGCGACACTCAGGCCTGGCTCTTTCACTCCGGCGCTGAAGCCTTCAGCATCGTTTACGCGGGGGTGGTGGCTTCGGGGATAGCGTTTGCGGTTCAGATCTGGTGCATTGACAGGGGCGGCCCGGTTTTCGTAGCGGTCTACCAACCGGTTCAGACCTTCGTTGTCGCTGTTATGGCTTCCTTCGCTTTGGGCGAAGAGTTCTACTTGGGAGGAATCATAGGGGCGGTGCTGATTATATCGGGGCTCTACCTTGTGCTGTGGGGCAAGAGCGAAGAGAAGAAATTCTTGTTGGCAAGGGCAGTGATCCAGTCCGCTCCGGAGCACAGTAGCAACAGAACAACCGCCCACATCAAGCCGTCCCTTACCGCCCCACTTCTCCATCCTTCGGCTGAAAATGTTTGA 1179 55.89 MADVGSVSDKRMSCSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNVIALLLLLPFAYFIEKKDRPALTLNFVIQFFFLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAALLRIEQVRLNRKDGIAKVLGTLCCVAGATVITLYKGPTIYSPATTATVTLQGTAAVAATGGMFPSLGDAKGKSWTLGCVYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSFTCFFGLIQFFIIAVAFERDTQAWLFHSGAEAFSIVYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAVMASFALGEEFYLGGIIGAVLIISGLYLVLWGKSEEKKFLLARAVIQSAPEHSSNRTTAHIKPSLTAPLLHPSAENV 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5723787 5726778 - MC08g0711 Mch8g0813 694434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0813 392 PANTHER WAT1-RELATED PROTEIN 24 364 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Mch8g0813 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 349 - -
Mch8g0813 392 Pfam EamA-like transporter family 27 163 IPR000620 GO:0016020(InterPro)
Mch8g0813 392 Pfam EamA-like transporter family 207 345 IPR000620 GO:0016020(InterPro)
Mch8g0813 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g0813 Mch-Chr8:5723787 Mch8g2697 Mch-Chr8:30211045 8.33E-73 dispersed
Mch11g0858 Mch-Chr11:5841995 Mch8g0813 Mch-Chr8:5723787 1.17E-72 transposed
Mch3g0950 Mch-Chr3:13364676 Mch8g0813 Mch-Chr8:5723787 1.50E-70 transposed
Mch6g0404 Mch-Chr6:2667078 Mch8g0813 Mch-Chr8:5723787 3.62E-136 transposed
Mch11g0152 Mch-Chr11:971425 Mch8g0813 Mch-Chr8:5723787 3.01E-208 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0813 - - - 0.0