Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0816 CCCATGGATCTGCTACGATCGGAGCCGATGCAATTGGCGCAGCTGATCATTCCTAATGAATCAGCGCACCGGACGATTTCCTACCTCGGCGACCTCGGTCTCTTCCAATTCAACGATCTCAATGCGTCTAGAAGCCCATTCCAGCGGACGTATGCTACTCATATTAAAAGATGTGGGGAAATGGCTCGCAAGCTACGGTTTTTCAGGGATCAAATGGCAAGGGCTGGTTTATCACCCTCAACAAATTCTCTAGGGGTTCCTGGTTTAGATCTGGATAATTTAGAGGTTAAACTTGGAGAACTTGAGGCAGAGTTGTTAGAGATAAATGACAACAACGAAAAGTTACAACGCAATCATAGTGAGCTATTGGAATATAAGCTTGTACTGCAGAAGGTCGGTGAGTTTTTCCAGCTAGCTCAAAGCATAGCTGCAGCTCAGCAAAGGGAACTGGAAGTGCAGCAAAACAAGGAAGGATCCATTGACAGTCCCCTATTATTGGAACAAGAAATGACAACGGATCCAATGAAACAAGTAAAACTAGGATATATCAGTGGTCTTGTTCCAAGAGAAAAGTCAATGGCTTTTGAAAGGATTTTGTTTCGTTCAACTAGGGGCAACATGTACCTGAGACAAGCTGTGGTTGATGGTTCTGTCACTGATCCTGTATCTGGTGAGAAGGTCGAGAAAAATGTGTTTGTCATATTCTTTTCCGGAGAGAGAGCAAAGAATAAAATCCTGAAAATATGTGAAGCTTTTGGTGCAAACCGATATCCATTCACTGATGACTTGGGCAAACAATTGCAGATGATAACAGAGGTGTCTGGAAAACTCTCTGAATTGAAGACTACCATTGATGTGGGGAAACTGCATCGAAGTAAACTCTTTCAGACAATTGGCCATCAATATGAGCAGTGGAATCTTCTGGTAAAGAAGGAAAAATCTATTTACCACACTTTGAATATGCTCAGTGTTGATGTAACGAAGAAATGCCTTGTTGGTGAAGGTTGGTGTCCTGTTCTTGCTACAAATCAGATTCAAAATGCAATGCATAAGGCAACCTATGACAGCAAATCACAAATTGAGGCTATCTTTCATGTTTTGCGTACGAAGGAAGCACCACCAACATATTTCCGTACAAACAAATTTACTTCTTCATTTCAAGAAATCGTGGATGCATATGGGGTTGCTAAGTATCAGGAAGCAAATCCTGGAGTCTACACGATTATCACATTCCCTTTCCTTTTTGCTGTAATGTTTGGTGATTGGGGCCATGGCATATGCTTGTTGCTGGCAACATTATATTTTATAACAAGGGAGAAAAAATTTTCCAGTGAGAAACTTGGAGATATCATTGAAATGACTTTCGGGGGACGTTATGTTATCATGATGATGGCACTTTTTTCAATCTACACAGGACTGATTTATAATGAATTCTTTTCTGTCCCGTTTGAACTGTTTGGGCCTTCTGCTTATGGTTGTCGTGATACATCATGCAGGGATGCTACTACCATTGGTCTCATAAAGGTTCGTGATACATATCTCTTTGGTGTGGATCCTAAGTGGCATGGTACTCGAAGTGAGTTACCTTTTCTCAACTCTTTGAAGATGAAGATGTCTATCCTACTGGGAGTAGCTCAAATGAATCTTGGAATTATATTGAGTTACTTCAATGCGAAATTCTTTGGAGAAAACATCAACATCTGGTACCAATTTGTTCCACAAATGATATTCTTGAACAGCTTATTTGGTTACCTCTCACTTCTCATAATTGTAAAATGGTGCTCTGGATCTCAAGCTGATCTGTATCACATAATGATATATATGTTCTTGAGTCCTACAGATGATCTGGGTGAAAATCAGCTTTTTCCAGGACAGAAGTTCCTTCAGCTTATGTTACTTCTGTCTGCCCTCATTGCTGTGCCATGGATGTTGCTTCCCAAGCCTTTTCTTTTGAAGAAACAACATGAAGAAAGGCATCAAGGCCAATCCTACTCCCTAATTCACAGCACAGATGACAATGATGAAACAGAACATAGCCACGGTTCCCACAGCCACGAGGAGTTTGATTTCAGTGAGGTCTTTGTACACCAACTCATACATACCATTGAGTTTGTGCTTGGTGCAGTTTCTAATACGGCGTCCTATCTACGTCTATGGGCCCTCAGTCTAGCCCATTCGGAGTTGTCGAGTGTATTCTACGACAAGATTCTTCTCCTAGCCTGGGGGTTCAATAGTTTGATGATCCGAGCAGTAGGAGTTGTTGTTTTTATTTGTGCAACCGTTGGAGTTTTGCTAGTTATGGAAACTCTAAGCGCATTCCTACACGCCTTGAGGCTCCACTGGGTGGAGTTTCAGAACAAATTCTATGCAGGTGATGGATTCAAATTTTCCCCCTTCTCGTTTTCGTCGCTTCGGGACGAGGATGAGTGA 2430 41.73 PMDLLRSEPMQLAQLIIPNESAHRTISYLGDLGLFQFNDLNASRSPFQRTYATHIKRCGEMARKLRFFRDQMARAGLSPSTNSLGVPGLDLDNLEVKLGELEAELLEINDNNEKLQRNHSELLEYKLVLQKVGEFFQLAQSIAAAQQRELEVQQNKEGSIDSPLLLEQEMTTDPMKQVKLGYISGLVPREKSMAFERILFRSTRGNMYLRQAVVDGSVTDPVSGEKVEKNVFVIFFSGERAKNKILKICEAFGANRYPFTDDLGKQLQMITEVSGKLSELKTTIDVGKLHRSKLFQTIGHQYEQWNLLVKKEKSIYHTLNMLSVDVTKKCLVGEGWCPVLATNQIQNAMHKATYDSKSQIEAIFHVLRTKEAPPTYFRTNKFTSSFQEIVDAYGVAKYQEANPGVYTIITFPFLFAVMFGDWGHGICLLLATLYFITREKKFSSEKLGDIIEMTFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFGPSAYGCRDTSCRDATTIGLIKVRDTYLFGVDPKWHGTRSELPFLNSLKMKMSILLGVAQMNLGIILSYFNAKFFGENINIWYQFVPQMIFLNSLFGYLSLLIIVKWCSGSQADLYHIMIYMFLSPTDDLGENQLFPGQKFLQLMLLLSALIAVPWMLLPKPFLLKKQHEERHQGQSYSLIHSTDDNDETEHSHGSHSHEEFDFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKILLLAWGFNSLMIRAVGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYAGDGFKFSPFSFSSLRDEDE 809
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5767645 5780875 - MC08g0714 Mch8g0816 694437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0816 809 Coils Coil 91 118 - -
Mch8g0816 809 PIRSF ATP6V0A1 1 809 IPR026028 GO:0000220(InterPro)|GO:0046961(InterPro)
Mch8g0816 809 PANTHER VACUOLAR PROTON ATPASES 2 806 IPR002490 GO:0007035(PANTHER)|GO:0016471(PANTHER)|GO:0033179(InterPro)|GO:0046961(InterPro)|GO:0051117(PANTHER)|GO:1902600(InterPro)
Mch8g0816 809 Pfam V-type ATPase 116kDa subunit family 28 801 IPR002490 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0972 Mch-Chr2:6572280 Mch8g0816 Mch-Chr8:5767645 0 transposed
Mch4g0569 Mch-Chr4:3625781 Mch8g0816 Mch-Chr8:5767645 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0816 K02154 - csv:101209817 1438.32