Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0870 AACTCAAAAAGCTTCAACCCCATGTCTCTCTTCACCCTTCTTCTCCTTGCTTTCTCCTTCCTTCCCTCTCTCGACGCCTTGAGCTACCGCTTCTATGACCACACATGCCCCGATCTCGAGTCAATCGTCGCTAGAGAAGTCCACTTGGCCACCGTGAACGACAAGACCGTCCCAGCTGCACTGCTTCGAATGCACTTCCATGACTGTTTCATTAGAGGTTGCGATGGCTCTGTGCTTCTCGACTCGAAGGGGAAGAACACTGCAGAAAAAGATGGTCCTCCCAATATATCGCTGCATGCTTTTTATGTCATTGACAATGCCAAGAAAGCCATCGAGTCGGTCTGCCCAAGCGTCGTTTCGTGCGCTGACATCTTAGCCCTTGCTGCTCGTGACGCGGTTGTTTTGTCTGGAGGTCCTCATTGGGAAGTCCCAAAAGGAAGAAAAGATGGAAGAATTTCAAAAGCAATTGAAACCAGACAATTGCCTGCTCCCACCTTCAACTTCTCTCAACTCCAACAAAGCTTCTCACAGAGAGGTCTTTCCATAGAAGATCTCGTTGCTCTCTCAGGCGGCCACACTCTTGGATTCGCCCACTGCTCGTCGTTCCAAAACAGAATCCACAACTTCAACTCCAGCCTCGACGTTGACCCGTCGCTGCAGCCAGCATTCGCTGCCAGCCTCCGGAGCGCATGTCCAGCGCACAACAAGGCGAAAAATGCCGGCTCCGCCTTGGATTCAACTTCGACGAGGTTCGACAATGCATATTTCAAGCTAATTCTTCAAGGGCGGAGCGTTTTCTCTTCTGATCAATCGCTGCTTTCGACCCCGAAAACAAAGGCTTTGGTGTCGAAGTTCGCCGACGAACAGCAGCGGTTCGAGAAGGCGTTTGTGAAGTCGATGGTGAAGATGAGCCGCATCGCCGGCGCCGGAGAAGAGGTCCGGCTTAACTGCAGGGTGATCAGATGA 966 51.86 NSKSFNPMSLFTLLLLAFSFLPSLDALSYRFYDHTCPDLESIVAREVHLATVNDKTVPAALLRMHFHDCFIRGCDGSVLLDSKGKNTAEKDGPPNISLHAFYVIDNAKKAIESVCPSVVSCADILALAARDAVVLSGGPHWEVPKGRKDGRISKAIETRQLPAPTFNFSQLQQSFSQRGLSIEDLVALSGGHTLGFAHCSSFQNRIHNFNSSLDVDPSLQPAFAASLRSACPAHNKAKNAGSALDSTSTRFDNAYFKLILQGRSVFSSDQSLLSTPKTKALVSKFADEQQRFEKAFVKSMVKMSRIAGAGEEVRLNCRVIR 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6209238 6210769 + MC08g0762 Mch8g0870 694491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0870 321 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g0870 321 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g0870 321 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g0870 321 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g0870 321 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g0870 321 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g0870 321 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g0870 321 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g0870 321 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g0870 321 CDD secretory_peroxidase 27 320 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch8g0870 321 Pfam Peroxidase 44 287 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g0870 321 ProSiteProfiles Plant heme peroxidase family profile. 26 321 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g0870 321 Gene3D Peroxidase, domain 2 162 303 - -
Mch8g0870 321 FunFam Peroxidase 162 303 - -
Mch8g0870 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Mch8g0870 321 Gene3D - 30 320 - -
Mch8g0870 321 SUPERFAMILY Heme-dependent peroxidases 27 320 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g0870 321 FunFam Peroxidase 30 167 - -
Mch8g0870 321 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g0870 321 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g0870 321 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g0870 321 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g0870 321 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch8g0870 321 PANTHER PEROXIDASE 25-RELATED 21 317 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0628 Mch-Chr2:4291657 Mch8g0870 Mch-Chr8:6209238 7.05E-85 dispersed
Mch6g0723 Mch-Chr6:4975018 Mch8g0870 Mch-Chr8:6209238 6.02E-80 dispersed
Mch7g0120 Mch-Chr7:1499394 Mch8g0870 Mch-Chr8:6209238 5.12E-57 dispersed
Mch8g0870 Mch-Chr8:6209238 Mch9g2030 Mch-Chr9:21534314 8.50E-70 dispersed
Mch10g0197 Mch-Chr10:1177379 Mch8g0870 Mch-Chr8:6209238 1.50E-120 transposed
Mch11g0479 Mch-Chr11:3065920 Mch8g0870 Mch-Chr8:6209238 5.17E-74 transposed
Mch1g0156 Mch-Chr1:3740253 Mch8g0870 Mch-Chr8:6209238 7.62E-89 transposed
Mch1g1612 Mch-Chr1:17200436 Mch8g0870 Mch-Chr8:6209238 1.08E-147 transposed
Mch1g1599 Mch-Chr1:17139790 Mch8g0870 Mch-Chr8:6209238 1.25E-13 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0870 K00430 - csv:101214403 532.717