Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0932 ATGTGCGGTGGTCCAGAACAATCAAATTCTGCATCTACTACTTCATCAGCAAGCTCACCTAACCCCAAAGACATGAATCATTTAGCCGTTGATTGTGAAGATTCTTTTTATAGTTTACTGGAGCTTGCCTCTGACAACGATGTAGAGGGCTTCAAGCGTTTGATGGATTCTGATTTGCTTTCACTTAACAAGTCTGGACTCTGGTATGTTCGACAAAAAGGTTCCAAACAAGTTGTTCATGAGCATAGAACACCCCTGATGGTTGCTGCCACATATGGTTGTGTTGATGTTCTGAAGCTTATACTATCTTTTCCTGAGGTTGATGTTAATCTGTCGTCTGGCACAGACAAGAGCACTGCTCTCCACTGTGCTGCTTCCAGTGGATCTGTGAATGCTGTTGATATTGTTGATATGCTTTTATCGGCTGGTGCTGACCCAAGCTCCAAGGATGTTAATGGTGATCGTCCTGTTGATGTCATTTTTGTTCACCCAAAGCTGCAGAAGCAGAACACAAGGTTCAGGCTTGAGGAACTTCTCAATAATCATGCTTCCAATGGATCTATGGATGTTTCCTGTTTGCGTTTATCAATCAAAACGCCCGATTCAGAGTCACCATCACTCTCCTCATCATTGGAGGATGAATTTCCATCTCCTCCCAAGTCCATGTCTTCTCCCAAATTTACTGATGGGTTTGCAAACTCTACAAAGGAGAAGAAAGAATATCCAATTGATCCATCACTTCCTGACATTAAGAACAGTATATATGCAACTGATGAGTTTCGCATGTTCTCATTCAAAGTGAGACCTTGTTCTAGGGCCTATTCCCATGATTGGACTGAGTGTCCGTTTGTCCACCCAGGGGAGAATGCTCGCCGAAGAGACCCAAGGAAGTTTCACTACAGCTGTGTTCCTTGCCCAGACTTCAGAAAGGGGGCTTGTAGGCGTGGGGATATGTGCGAATATGCACATGGAGTGTTTGAATGTTGGCTTCACCCAGCTCAGTATCGAACTCGTCTTTGTAAGGATGGGACAAGTTGCAATAGACGGGTCTGTTTCTTTGCTCATACCAATGAGGAGCTAAGGCCATTGTATGTGTCTACTGGATCTGCCGTCCCTTCCCCACGATCAATTGGATCTGCCCCAACTGTAATGGACATGGCTACTGCATTGGGTCTTCTGCCCGGTTCCCCTTCATCAGTGTCAGCCTTATCTCCATCTCCATTTGCGCAGTCCATGTCTCCCTCCTCTAATGGCATTTCTCACGCTTCTATGAACTGGCAGCAACCGAATGTACCAACTCTTCATCTTCCAGGCAGTAACCTTCAATCTAGCCGGTTGAGGTCATCTCTTAATGCCAGGGATATGCCTTTGGAGGATTTGAATGTCTTACCAGACTTTGACAACCAGCCACGGATGTTAAATGATATGAACTGTTTCTCTCAGCCTCGTCCAAGTGCAGTGTCTGTGAGCCGATCTTGCTGGACCCAGACTCTAACTCCTAACAACCTTGAAGAGCTATTTTCTTCTGAGATCTCTTCGTCTCCCCGATTCTCTGATCCAGCCACCAACGTCTTTTCCCCTACACGCAAATCAACATTACTTAATCAATTCCAGCAGCAGCAGAACATGTTGTCACCTATTAATACAAGCATTATGTCTCCTAAGAATGTCGATCATCCTTTGTTGCAGGCCTCTTTTGGAGTTTCATCGCCAGGAAGGATGTCACCAAGAAGCACTGAGCCACCATCCCCAATGGGATCTAGGTTCTCCGCCTTTGTACAGCGTGAAAAGCAACAACATCTCCGCACCCTCAGCTCAAGGGAGCTTGGATCCAACGTCCTCAGCTCATTGATTGGATCTCCTGTTAGTTCTTTGCCTAAATGGGGATCCCCCAATGGGAAAGTGGATTGGTCGGTTGGTAAAAGTGAACTGGGTCAACTGCAAAGATCATCCTCTTTTGAGATCGGGAATAACGGGGAGGAGCCTGACTTATCATGGGTTCAATCCCTGGTGAAGGAGTCCCCACCTGAGATGCTAAAAGAGAAGTTGGCAGCACCTGGGATGGGCGCTGCAGCATCCGGTGAGGACCTCAATACCACTAAATCACAATTAGAATCCTCTGATCATTCTGTGATAGGAGCTTGGCTTGAGCAGATGCAGCTTGATCAGCTTGTAGTGTAG 2181 46.26 MCGGPEQSNSASTTSSASSPNPKDMNHLAVDCEDSFYSLLELASDNDVEGFKRLMDSDLLSLNKSGLWYVRQKGSKQVVHEHRTPLMVAATYGCVDVLKLILSFPEVDVNLSSGTDKSTALHCAASSGSVNAVDIVDMLLSAGADPSSKDVNGDRPVDVIFVHPKLQKQNTRFRLEELLNNHASNGSMDVSCLRLSIKTPDSESPSLSSSLEDEFPSPPKSMSSPKFTDGFANSTKEKKEYPIDPSLPDIKNSIYATDEFRMFSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTNEELRPLYVSTGSAVPSPRSIGSAPTVMDMATALGLLPGSPSSVSALSPSPFAQSMSPSSNGISHASMNWQQPNVPTLHLPGSNLQSSRLRSSLNARDMPLEDLNVLPDFDNQPRMLNDMNCFSQPRPSAVSVSRSCWTQTLTPNNLEELFSSEISSSPRFSDPATNVFSPTRKSTLLNQFQQQQNMLSPINTSIMSPKNVDHPLLQASFGVSSPGRMSPRSTEPPSPMGSRFSAFVQREKQQHLRTLSSRELGSNVLSSLIGSPVSSLPKWGSPNGKVDWSVGKSELGQLQRSSSFEIGNNGEEPDLSWVQSLVKESPPEMLKEKLAAPGMGAAASGEDLNTTKSQLESSDHSVIGAWLEQMQLDQLVV 726
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6663184 6666313 + MC08g0817 Mch8g0932 694553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0932 726 MobiDBLite consensus disorder prediction 200 231 - -
Mch8g0932 726 SMART c3hfinal6 334 357 IPR000571 GO:0046872(InterPro)
Mch8g0932 726 SMART c3hfinal6 299 325 IPR000571 GO:0046872(InterPro)
Mch8g0932 726 ProSiteProfiles Ankyrin repeat region circular profile. 116 150 - -
Mch8g0932 726 FunFam Zinc finger CCCH domain-containing protein 66 257 325 - -
Mch8g0932 726 ProSiteProfiles Ankyrin repeat profile. 116 151 IPR002110 GO:0005515(InterPro)
Mch8g0932 726 MobiDBLite consensus disorder prediction 567 586 - -
Mch8g0932 726 ProSiteProfiles Zinc finger C3H1-type profile. 304 326 IPR000571 GO:0046872(InterPro)
Mch8g0932 726 PANTHER UNKEMPT FAMILY MEMBER 71 675 IPR045234 -
Mch8g0932 726 MobiDBLite consensus disorder prediction 568 585 - -
Mch8g0932 726 MobiDBLite consensus disorder prediction 1 24 - -
Mch8g0932 726 SUPERFAMILY Ankyrin repeat 36 160 IPR036770 -
Mch8g0932 726 Gene3D - 34 183 IPR036770 -
Mch8g0932 726 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 303 324 IPR000571 GO:0046872(InterPro)
Mch8g0932 726 Gene3D - 299 362 - -
Mch8g0932 726 SMART ANK_2a 81 111 IPR002110 GO:0005515(InterPro)
Mch8g0932 726 SMART ANK_2a 116 148 IPR002110 GO:0005515(InterPro)
Mch8g0932 726 MobiDBLite consensus disorder prediction 1 23 - -
Mch8g0932 726 Pfam Ankyrin repeats (3 copies) 73 150 IPR002110 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g1393 Mch-Chr5:14948843 Mch8g0932 Mch-Chr8:6663184 5.56e-310 dispersed
Mch8g0932 Mch-Chr8:6663184 Mch8g3199 Mch-Chr8:34150729 2.62E-56 dispersed
Mch8g0932 Mch-Chr8:6663184 Mch9g1463 Mch-Chr9:17005084 3.69E-142 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43832 PF12796 Ank_2 3.60E-10 CL0465 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0932 - - - 0.0