Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g0987 ATGATGGAAGAGATGTCTCCTGCAGTTTCTTTGACTCTTAGTTTGGGTAATCCAAAGTCTGATAGCTCAGGAAGTCCGGGCCATGTCGAATTCACTCGGCTAAAGTTGGTAACAGACACTGTAAATTTATTCTCTGCATCGTCCCCCGATTCGGGTTCGATTGGCAAGGGTAGTTGCCATGATTTTAATGGTATAGTCGATGGTGTAACTGTGTCAAAATTGACTGACAGTGGTCAAGGTAGAGATAGTTTTTGGGGGTTGTTACCGGAGAATGGCACGAATTTGACTGCAGATAAGGGAGGTTCAACCTTATCTACTATGGATGACACTGACGAAATGATAGATGATGGATTGTTCGCTATTGATGGCACTTCAAAAATTAATGTGCAAGAAGTTGTCAAAATTGGAGATGTTAGCAATGGTCATATTGTTGCCAAGGCTATTATCTTAGTGGAATCAAGAAAGATTCCTACCAGCGAAATCATCGTGGCGACGGTAAGCCCAGATTTAGAAGTATCCGCTAAGTCGGAGTTGAATGCCCCTGCAGTAGTTTTCCGATCGAAAGGGGAGGAAAATGTTCATAAAGGCGCTCGTAGTGTCTTTGAACTAGATTGTATTCCCCTTTGGGGTTCTGTATCGATTTGTGGTAGAAGACCGGAGATGGAAGATGCAATTGCTGCTGTTCCTTGTTTTACCAAGATTCCTATCAAAATGCTCGTAGGCAATGGTTTGGTTAATGGAATGGGCCAAAGTTTAACACATCTCAACAGCCATTTCTTTGGTGTTTATGATGGACATGGGGGCTCTCAGGTTGCTGATTATTGTCGAGAGCGAATACATTTGGCATTAGCTGAAGAGATAGGAAGATTTAAACAAAATCTAAGCACTGAAGAGAACTGGCAGCAGGATTGGGAGAGAACCTTTAATAATTGCTTTTTGAGGGTTGATGATGAAATAGAAGGAAAAGTTGGTGGATCAGTCAGTGGAAGCGATGGAGATGTTTCCGATGCTAGCTTTGAATCTGTTGCCCCGGAAACTGTTGGCTCTACTGCTGTTGTTGCCTTGGTCTGTTCGTCTCACATCATAGTTGCAAACTGTGGCGATTCAAGAGCAGTCCTATGCCGTGGCAAAGAACCTATGGCGCTTTCAGTCGATCATAAACCAAATCGGGAAGATGAATATGCTCGGATCGAATCATCTGGAGGCAAAGTCATCCAGTGGAATGGACACCGCGTATTCGGAGTTCTTGGAATGTCAAGATCCATTGGTGATAGATATCTGAAGCCATGGATTATTCCCGATCCAGAAGTCATGTTCATTCCTCGCGCAAAAGAAGACGAATGTCTTATTTTAGCCAGTGATGGACTGTGGGATGTGATGACGAACGAGGAAGTCTGCGAAGTGGCTCGAAGGCGGATTCTGCTTTGGCACAAAAAGCATGGGGCATCATCTCTCGCCAATCGGGGCGTGGGGGTCGACCCAGCTGCACAAGCAGCAGCAGAATACCTCTCTATGCTTGCTCTCCAAAAGGGAAGCAAAGACAACATCTCTGTGATTGTAGTGGACTTGAAAGCTCAAAGAAAGTTCAAGACCAAATCTTGA 1602 44.44 MMEEMSPAVSLTLSLGNPKSDSSGSPGHVEFTRLKLVTDTVNLFSASSPDSGSIGKGSCHDFNGIVDGVTVSKLTDSGQGRDSFWGLLPENGTNLTADKGGSTLSTMDDTDEMIDDGLFAIDGTSKINVQEVVKIGDVSNGHIVAKAIILVESRKIPTSEIIVATVSPDLEVSAKSELNAPAVVFRSKGEENVHKGARSVFELDCIPLWGSVSICGRRPEMEDAIAAVPCFTKIPIKMLVGNGLVNGMGQSLTHLNSHFFGVYDGHGGSQVADYCRERIHLALAEEIGRFKQNLSTEENWQQDWERTFNNCFLRVDDEIEGKVGGSVSGSDGDVSDASFESVAPETVGSTAVVALVCSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNREDEYARIESSGGKVIQWNGHRVFGVLGMSRSIGDRYLKPWIIPDPEVMFIPRAKEDECLILASDGLWDVMTNEEVCEVARRRILLWHKKHGASSLANRGVGVDPAAQAAAEYLSMLALQKGSKDNISVIVVDLKAQRKFKTKS 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7033612 7037498 + MC08g0869 Mch8g0987 694608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g0987 533 ProSitePatterns PPM-type phosphatase domain signature. 259 267 IPR000222 GO:0043169(InterPro)
Mch8g0987 533 SUPERFAMILY PP2C-like 201 524 IPR036457 -
Mch8g0987 533 Pfam Protein phosphatase 2C 230 516 IPR001932 -
Mch8g0987 533 PANTHER PROTEIN PHOSPHATASE 184 522 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch8g0987 533 Gene3D - 195 533 IPR036457 -
Mch8g0987 533 MobiDBLite consensus disorder prediction 10 27 - -
Mch8g0987 533 MobiDBLite consensus disorder prediction 1 27 - -
Mch8g0987 533 ProSiteProfiles PPM-type phosphatase domain profile. 208 523 IPR001932 -
Mch8g0987 533 CDD PP2Cc 210 523 IPR001932 -
Mch8g0987 533 SMART PP2C_4 198 521 IPR001932 -
Mch8g0987 533 FunFam Protein phosphatase 2C 16 196 533 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g0557 Mch-Chr8:3997575 Mch8g0987 Mch-Chr8:7033612 1.76E-171 dispersed
Mch8g0987 Mch-Chr8:7033612 Mch9g1452 Mch-Chr9:16876043 6.64E-34 dispersed
Mch8g0987 Mch-Chr8:7033612 Mch6g0853 Mch-Chr6:5919257 4.14E-80 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g0987 K14497 - csv:101203499 938.332