Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1013 ATGGTGAAGAACTGGAGTTGGGGAGAGCCGTTGCTGCTAATCAATATTTGCATTTTTGGATGGATGGCCAGTTTCATCAGCGGAGATACGGATCCAGGAGATGTGTCTGCTCTAAATTCCATGTATAGTAGTTTAAACTTGCCTCCAATTCTAATACAATGGAGTTCAAGTGGTGGAGATCCATGTGGGCTAACTTGGAAAGGAATTACTTGCTCGGGCTCACGGGTCACAGAAATTTCATTGTCTGGCTTAGGGCTTTCTGGATCACTGGGATACCAGCTCTCAAGTTTGACAGCTCTAATTAATCTAGATGTGAGTATCAACAATCTTGGACCTGACATACCTTATCAACTCCCTCAAAACTTGCAAAAACTGTATGCTTCTATTGTCATTCATTCTGACAAAGTTATATTTCCATTCCAACTTGTAAAATTATTTTCTTTCTGCAGAAACCTTGGATCTAATAACTACAGTGGAAGCTTACCCTATTCTATTTCTCAAATGAGTTCGCTTATTTCCTTAAACATCAGCCACAATCAGCTTCGGAATCAAGTGAATGATATGTTCTGGAACCTTTCTTCCCTGTCCACGTTGGATTTCTCTTTCAATTCTTTGTCAGGTGCCCTCCCCCAGAGTTTTAGCAACCTCACCAGTATGAACTCAATGTTTCTGCAGAACAACCAATTAAGTGGCACTATTGACGTTCTTGCAAATCTTCCACTACAAAATTTGAATGTCGAGAACAACAATTTTACTGGATGGATTCCTGAACGATTGAAGAATATAAATATACAGGAGGGTGCCAATTCTTGGAGCTTTGGGCTTGCACCCCCACCTCCACCCGGTACGCCAGTCAACCAAAATTACAGATATCACAAGCCTGGGATCAATTACAGCCCACTGAGTAGTGACGCTGGTGGTGGAGGTAGCAGTAGATCAGGAATCAGTGGTGGTGCCATTGCAGGAATTCTTATATCTGTGATAGTAGTTGGAGCGGTACTAGCATATCTCCTTGTAAAGCGAAGACCAAAGAGGTCATCCACAGACATAGAAAAGCAAAAGCAAAAGCTTGGGAACCTGCCTAGCGTATCTCCTGCTTCAAATGAAGTGCAAGATTCATTGGCAGAGATGAAGCTTATTCATACTTCATCTTCATTTGACGCAAAAGCATTGGATTCTCCTGCTTCAATCAACCTTAAACCCCCACCTATTGAACGTCATAAATCATTTGATGACAATGATACATTGAAGATATCTGTTGTGAAGAATACCAATGCCGCCCCTCCGATAAGTGTGAGGTCATATTCAATAGCAGATCTGCAAATGGCTACAGGCAGCTTCAATGTAGAAAACCTTCTTGGTGAGGGATCGTTTGGACGTGTTTATCGGGCTCAGTTTGATGATGGAAAGGTTCTTGCCGTGAAGAAAATAGATTCATCTGCCCTCCCTAGAGAACTTTTGGAAGATTTCACAGAGATCGTTGCCAATGTTTCTCAGCTGCATCATCCTAATGTAACCGAGCTAATGGGTTATTGCTCAGAGCATGGTCTACATTTGCTACTATATGAGTTCCATAAGAATGGCTCACTACATGACTTCTTGCATATAGCAGATGACTATAGCAAGCCACTGACTTGGAACTCACGTGTCAAGATTGCTTTGGGGACGGCCCGTGCATTAGAGTACTTACATGAAGTATGTGCCCCATCAGTTGTTCACAGAAATATTAAATCAGCCAATATCTTACTGGATGCTGAACTCAATCCTCATCTCTCCGATTGTGGCCTGGCTAGCTTTATAACCAATCTAGATCAGGCATTGGATCAGCAAGCGGGATCCGGATACAGTGCCCCTGAGGTTACCATGTCGGGTCAATATACATTAAAGAGTGATGTATATAGCTTTGGAGTGGTGATGTTGGAACTTCTAAGCGGACGCAAGCCATTCGATAGTTCAAGGCCAAGAACCGAGCAGTCCTTGGTTCGATGGGCTACACCTCAGCTCCACGACATTGATGCCTTGACAAAAATGGTTGATCCAGCACTAAAAGGGCTCTACCCAGTCAAGTCGCTATCAAGATTTGCAGATGTTGTGGCTCTTTGTGTTCAGCCCGAGCCCGAATTCAGACCGCCCATGTCAGAGGTGGTAGAAGCGTTGGTTCGGCTTGTGCAGAGATCCAACATGAGCAGAAGAACATTTGGAAGTGATCACACAGCATCTTTTAGAACTGATGATCCTGATGTCCAAGATACATCTTAA 2259 43.25 MVKNWSWGEPLLLINICIFGWMASFISGDTDPGDVSALNSMYSSLNLPPILIQWSSSGGDPCGLTWKGITCSGSRVTEISLSGLGLSGSLGYQLSSLTALINLDVSINNLGPDIPYQLPQNLQKLYASIVIHSDKVIFPFQLVKLFSFCRNLGSNNYSGSLPYSISQMSSLISLNISHNQLRNQVNDMFWNLSSLSTLDFSFNSLSGALPQSFSNLTSMNSMFLQNNQLSGTIDVLANLPLQNLNVENNNFTGWIPERLKNINIQEGANSWSFGLAPPPPPGTPVNQNYRYHKPGINYSPLSSDAGGGGSSRSGISGGAIAGILISVIVVGAVLAYLLVKRRPKRSSTDIEKQKQKLGNLPSVSPASNEVQDSLAEMKLIHTSSSFDAKALDSPASINLKPPPIERHKSFDDNDTLKISVVKNTNAAPPISVRSYSIADLQMATGSFNVENLLGEGSFGRVYRAQFDDGKVLAVKKIDSSALPRELLEDFTEIVANVSQLHHPNVTELMGYCSEHGLHLLLYEFHKNGSLHDFLHIADDYSKPLTWNSRVKIALGTARALEYLHEVCAPSVVHRNIKSANILLDAELNPHLSDCGLASFITNLDQALDQQAGSGYSAPEVTMSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRTEQSLVRWATPQLHDIDALTKMVDPALKGLYPVKSLSRFADVVALCVQPEPEFRPPMSEVVEALVRLVQRSNMSRRTFGSDHTASFRTDDPDVQDTS 752
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7183135 7192828 - MC08g0891 Mch8g1013 694634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1013 752 ProSitePatterns Protein kinases ATP-binding region signature. 453 476 IPR017441 GO:0005524(InterPro)
Mch8g1013 752 MobiDBLite consensus disorder prediction 733 752 - -
Mch8g1013 752 PANTHER LEUCINE RICH REPEAT KINASE 2 323 721 IPR051420 -
Mch8g1013 752 SUPERFAMILY L domain-like 30 259 - -
Mch8g1013 752 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 411 524 - -
Mch8g1013 752 Gene3D Ribonuclease Inhibitor 140 269 IPR032675 -
Mch8g1013 752 ProSiteProfiles Protein kinase domain profile. 447 722 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1013 752 Pfam Protein tyrosine and serine/threonine kinase 449 719 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1013 752 MobiDBLite consensus disorder prediction 345 368 - -
Mch8g1013 752 Gene3D Ribonuclease Inhibitor 34 137 IPR032675 -
Mch8g1013 752 SUPERFAMILY Protein kinase-like (PK-like) 428 719 IPR011009 -
Mch8g1013 752 MobiDBLite consensus disorder prediction 737 752 - -
Mch8g1013 752 MobiDBLite consensus disorder prediction 353 368 - -
Mch8g1013 752 Gene3D Transferase(Phosphotransferase) domain 1 526 745 - -
Mch8g1013 752 Gene3D Phosphorylase Kinase; domain 1 409 524 - -
Mch8g1013 752 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 525 733 - -
Mch8g1013 752 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 135 282 - -
Mch8g1013 752 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Mch8g1013 752 CDD STKc_IRAK 453 722 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1840 Mch-Chr1:18462526 Mch8g1013 Mch-Chr8:7183135 1.21E-125 dispersed
Mch4g0174 Mch-Chr4:1164393 Mch8g1013 Mch-Chr8:7183135 9.52E-120 dispersed
Mch5g1422 Mch-Chr5:15321490 Mch8g1013 Mch-Chr8:7183135 1.67E-104 dispersed
Mch5g1424 Mch-Chr5:15328696 Mch8g1013 Mch-Chr8:7183135 3.25E-117 dispersed
Mch8g1013 Mch-Chr8:7183135 Mch11g0054 Mch-Chr11:338613 3.10E-76 dispersed
Mch3g0804 Mch-Chr3:12118111 Mch8g1013 Mch-Chr8:7183135 2.38E-180 transposed
Mch4g1111 Mch-Chr4:11072431 Mch8g1013 Mch-Chr8:7183135 4.78E-184 transposed
Mch7g0025 Mch-Chr7:223736 Mch8g1013 Mch-Chr8:7183135 7.17E-34 transposed
Mch8g1013 Mch-Chr8:7183135 Mch9g0166 Mch-Chr9:1268020 1.09E-274 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77592 PF07714 PK_Tyr_Ser-Thr 8.40E-43 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1013 - - - 0.0