Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g1018 | ATGAGACCGCTTCAGCCGCCGCAGGGTGCGAATCCGGCCACCGATCGTCCTCGCCGTCGCCTGAATCTAACCCTTCCTCTTCCCCAGCGGGATAACACGTCTTTGGCGGTTCCTCTCCCTCTGCCTCCCACTTCCTCCAACTCCGCTCCTCCTTCCACCAGTCAACTCCACAACAACTCCACCGCCGTGAACCGCCAGCCGGAGCTTCACCCTCAGCCTCAGCGGCATCACCCGTTCAGCCTCTCGGAGTTGGAGCGAGTGAGTCGAATCGGAAGCGGATGCGGAGGCACCGTCTACAAAGTGATACACCGTCCCACCGGTCGCGTCTATGCTCTGAAGGCGATTTACGGCAACCACGAGGACGCGGTGAGGATCCAGATGTGCCGCGAGGTCGAGATCCTTCGCGACGTTGACGATCCTAATGTGGTGAAGTGCCACGACATGTTCGATCACAACGGCGAAATCCAAGTCCTCCTCGAGTACATGGATCGGGGTTCTCTGGAAGGAACGCACATCCCTCAGGAGGACCGCCTCTCGGATTTGGCTCGCCAGATTCTGAGCGGCCTCGCTTACCTCCATAGCCGCCGCATCGTCCATCGCGACATCAAACCCTCGAATCTCCTTATCAATTCCCGTAGGCAGGTTAAGATCGCCGATTTCGGCGTCGGCCGAATCTTGGAGCAGACCATGGACCCCTGCAACTCGTCGGTGGGCACAATTGCGTACATGAGCCCTGAGAGAATCAATTCCGATCTAAATCAGGGCCAGTACAATGGTTATGCTGGGGATATTTGGAGCTTTGGAGTTAGCATATTGGAATTCTATCTTGGAAGGTTTCCTCTTGCTGTGGAGAGACCCGGGGATTGGGCGAGCTTGATGTGCGCAATATGTATGGCTCAGCCCCCGGAGGCGCCGCCCACCGCCACGCCGGAGTTCCGCCACTTTATTTCCTGTTGTTTGCAGCGAGAGGCTTGGAGGAGATGGACTGCAGCTCGATTGTTGGATCACCCATTTATAACAGGGAAGAGCAGAGCAAGCCAGTACCAGAACCAGCAGGCTCATCACCAGAATCTCCGGCAACTATTACCTCCTCCGCCCCTTCATCCTTCCAGCCTTTCTTGA | 1122 | 56.95 | MRPLQPPQGANPATDRPRRRLNLTLPLPQRDNTSLAVPLPLPPTSSNSAPPSTSQLHNNSTAVNRQPELHPQPQRHHPFSLSELERVSRIGSGCGGTVYKVIHRPTGRVYALKAIYGNHEDAVRIQMCREVEILRDVDDPNVVKCHDMFDHNGEIQVLLEYMDRGSLEGTHIPQEDRLSDLARQILSGLAYLHSRRIVHRDIKPSNLLINSRRQVKIADFGVGRILEQTMDPCNSSVGTIAYMSPERINSDLNQGQYNGYAGDIWSFGVSILEFYLGRFPLAVERPGDWASLMCAICMAQPPEAPPTATPEFRHFISCCLQREAWRRWTAARLLDHPFITGKSRASQYQNQQAHHQNLRQLLPPPPLHPSSLS | 373 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 7204547 | 7205668 | - | MC08g_new0125 | Mch8g1018 | 694639 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g1018 | 373 | ProSitePatterns | Protein kinases ATP-binding region signature. | 90 | 113 | IPR017441 | GO:0005524(InterPro) | |
Mch8g1018 | 373 | PANTHER | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED | 53 | 343 | - | GO:0000165(PANTHER)|GO:0004708(PANTHER) | |
Mch8g1018 | 373 | SUPERFAMILY | Protein kinase-like (PK-like) | 61 | 353 | IPR011009 | - | |
Mch8g1018 | 373 | MobiDBLite | consensus disorder prediction | 345 | 373 | - | - | |
Mch8g1018 | 373 | FunFam | Mitogen-activated protein kinase 2 | 164 | 351 | - | - | |
Mch8g1018 | 373 | SMART | serkin_6 | 84 | 339 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch8g1018 | 373 | Gene3D | Phosphorylase Kinase; domain 1 | 53 | 163 | - | - | |
Mch8g1018 | 373 | Gene3D | Transferase(Phosphotransferase) domain 1 | 164 | 363 | - | - | |
Mch8g1018 | 373 | ProSiteProfiles | Protein kinase domain profile. | 84 | 339 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch8g1018 | 373 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 197 | 209 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch8g1018 | 373 | MobiDBLite | consensus disorder prediction | 1 | 60 | - | - | |
Mch8g1018 | 373 | Pfam | Protein kinase domain | 85 | 339 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch8g1018 | 373 | MobiDBLite | consensus disorder prediction | 38 | 60 | - | - | |
Mch8g1018 | 373 | CDD | PKc_MAPKK_plant_like | 82 | 341 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch3g1570 | Mch-Chr3:17718940 | Mch8g1018 | Mch-Chr8:7204547 | 8.39E-101 | dispersed | |
Mch8g1018 | Mch-Chr8:7204547 | Mch8g1481 | Mch-Chr8:11163807 | 1.36E-43 | dispersed | |
Mch8g1018 | Mch-Chr8:7204547 | Mch2g0539 | Mch-Chr2:3790771 | 2.35E-25 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77593 | PF00069 | Pkinase | 2.20E-59 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch8g1018 | K13413 | - | csv:101219669 | 602.438 |