Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1018 ATGAGACCGCTTCAGCCGCCGCAGGGTGCGAATCCGGCCACCGATCGTCCTCGCCGTCGCCTGAATCTAACCCTTCCTCTTCCCCAGCGGGATAACACGTCTTTGGCGGTTCCTCTCCCTCTGCCTCCCACTTCCTCCAACTCCGCTCCTCCTTCCACCAGTCAACTCCACAACAACTCCACCGCCGTGAACCGCCAGCCGGAGCTTCACCCTCAGCCTCAGCGGCATCACCCGTTCAGCCTCTCGGAGTTGGAGCGAGTGAGTCGAATCGGAAGCGGATGCGGAGGCACCGTCTACAAAGTGATACACCGTCCCACCGGTCGCGTCTATGCTCTGAAGGCGATTTACGGCAACCACGAGGACGCGGTGAGGATCCAGATGTGCCGCGAGGTCGAGATCCTTCGCGACGTTGACGATCCTAATGTGGTGAAGTGCCACGACATGTTCGATCACAACGGCGAAATCCAAGTCCTCCTCGAGTACATGGATCGGGGTTCTCTGGAAGGAACGCACATCCCTCAGGAGGACCGCCTCTCGGATTTGGCTCGCCAGATTCTGAGCGGCCTCGCTTACCTCCATAGCCGCCGCATCGTCCATCGCGACATCAAACCCTCGAATCTCCTTATCAATTCCCGTAGGCAGGTTAAGATCGCCGATTTCGGCGTCGGCCGAATCTTGGAGCAGACCATGGACCCCTGCAACTCGTCGGTGGGCACAATTGCGTACATGAGCCCTGAGAGAATCAATTCCGATCTAAATCAGGGCCAGTACAATGGTTATGCTGGGGATATTTGGAGCTTTGGAGTTAGCATATTGGAATTCTATCTTGGAAGGTTTCCTCTTGCTGTGGAGAGACCCGGGGATTGGGCGAGCTTGATGTGCGCAATATGTATGGCTCAGCCCCCGGAGGCGCCGCCCACCGCCACGCCGGAGTTCCGCCACTTTATTTCCTGTTGTTTGCAGCGAGAGGCTTGGAGGAGATGGACTGCAGCTCGATTGTTGGATCACCCATTTATAACAGGGAAGAGCAGAGCAAGCCAGTACCAGAACCAGCAGGCTCATCACCAGAATCTCCGGCAACTATTACCTCCTCCGCCCCTTCATCCTTCCAGCCTTTCTTGA 1122 56.95 MRPLQPPQGANPATDRPRRRLNLTLPLPQRDNTSLAVPLPLPPTSSNSAPPSTSQLHNNSTAVNRQPELHPQPQRHHPFSLSELERVSRIGSGCGGTVYKVIHRPTGRVYALKAIYGNHEDAVRIQMCREVEILRDVDDPNVVKCHDMFDHNGEIQVLLEYMDRGSLEGTHIPQEDRLSDLARQILSGLAYLHSRRIVHRDIKPSNLLINSRRQVKIADFGVGRILEQTMDPCNSSVGTIAYMSPERINSDLNQGQYNGYAGDIWSFGVSILEFYLGRFPLAVERPGDWASLMCAICMAQPPEAPPTATPEFRHFISCCLQREAWRRWTAARLLDHPFITGKSRASQYQNQQAHHQNLRQLLPPPPLHPSSLS 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7204547 7205668 - MC08g_new0125 Mch8g1018 694639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1018 373 ProSitePatterns Protein kinases ATP-binding region signature. 90 113 IPR017441 GO:0005524(InterPro)
Mch8g1018 373 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 53 343 - GO:0000165(PANTHER)|GO:0004708(PANTHER)
Mch8g1018 373 SUPERFAMILY Protein kinase-like (PK-like) 61 353 IPR011009 -
Mch8g1018 373 MobiDBLite consensus disorder prediction 345 373 - -
Mch8g1018 373 FunFam Mitogen-activated protein kinase 2 164 351 - -
Mch8g1018 373 SMART serkin_6 84 339 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1018 373 Gene3D Phosphorylase Kinase; domain 1 53 163 - -
Mch8g1018 373 Gene3D Transferase(Phosphotransferase) domain 1 164 363 - -
Mch8g1018 373 ProSiteProfiles Protein kinase domain profile. 84 339 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1018 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1018 373 MobiDBLite consensus disorder prediction 1 60 - -
Mch8g1018 373 Pfam Protein kinase domain 85 339 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1018 373 MobiDBLite consensus disorder prediction 38 60 - -
Mch8g1018 373 CDD PKc_MAPKK_plant_like 82 341 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1570 Mch-Chr3:17718940 Mch8g1018 Mch-Chr8:7204547 8.39E-101 dispersed
Mch8g1018 Mch-Chr8:7204547 Mch8g1481 Mch-Chr8:11163807 1.36E-43 dispersed
Mch8g1018 Mch-Chr8:7204547 Mch2g0539 Mch-Chr2:3790771 2.35E-25 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77593 PF00069 Pkinase 2.20E-59 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1018 K13413 - csv:101219669 602.438