Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1023 TGGAATGCCTCCGATTCCACTCCCTGTTCTTGGGCTGGGATCGAGTGCGATCCAAACCATCGCGTCGTCACCTTCAACCTCTCTGGCCATGGCGTTTCGGGTCAGCTCGGACCCGAAATAGCGCAATTGACCCACTTGCTGCACGATTTCAACGCCAACGATTTATCTGGACCGGTTCCAAATGAGATAGCTAACTGTAGCCGTTTACAATACTTGGATCTCTCCCAGAACCAATTTGGTGGAAAAATTCCTGTGACCTTAGGGCACCTTGCGAACTTGACCTACTTGAACTTCCATGGCAATGTTCTTACGGATGCCAGTGAAAATAACCTGAATGGAACAATTCCCTCAAGTTTGGGAAACTGCATCAATGTCACCTCAATTAATTTGTCAACCAACAAGTTAACAGGTGTTATACCTATAGAGTTGGGAAATCTTGTGAATATTCAAGGTTTGAGCTTGTCTCACAACCTGTTGGAAGGACCTTTGCCACCTTCCCTGTCAAATTGTGCCAAACTGGATGAATTTGATGTAGGATTCAATTTATTGAATGGTTCTGTACCTCATAGTTTGGGCAGCTGGAAAGTTATATCTACGTTGATATTAAAAGAGAATAAATTTAGTGGAGGCATCCCGGATCTATTATCAGAATTTGAAAACCTTTTACTGCTAGATCTTGGTGGCAATTTGTTTGGAGGTGAAATTCCCTCATCTATTGGATCTTTGAAGAATCTGTTCTATTCCTTGAATCTCAGTAGCAATGGGTTAACTGGCCAAATACCTTCTGAGCTGGGGAGGCACCTTACGAACTTGACGTACTTGAACTTCCATGCCAATGTTCTGACGGGTCAGATACCCGACTCGCTATTTCAAATTCCGAATTTTCAGGAGCTGTATCTTAGTGAGAACAATCTCAATGGTTCTATTCCTTCGAATGTTGGGAATTTGAGGCAGGTGTTGTATCTGTATCTGTATGGAAATCGGTTGTCTGGAACCATACCTTATTCCATTGGGAATTGTAGCCAGTTGGTGGATCTTTATTTGGATACGAACCAGTTGGTGGGAGTTTTGCCCAGTAGTCTTAACAATCTTGCCAATCTTGTTAATTTGGGTGTCAGCCACAACAATCTTGAGGGTCCAATTCCTTTGGGTTCAGGTGGTTGCCAGAGTTTAGAATATGTAGATTTGTCATTCAATGGTTATACAGGAGGTATACCTGCTGGGCTGGGCAATTGTAGTAGCCTAACAACCTTTCTCTCTATAAATTCCAGTCTAACAGGTCATATTCCTTCCTCCTTTGGCCGTCTGAATAAACTTTCCGCACTTGATCTCTCTAGAAATCAACTGTCTGGGAATATACCCCCCGAACTCGGGGATTGCAAATCCTTGACAGAACTGAATTTGTACACCAACCAACTGGAGGGACGTATTCCTAGTGAATTGGGTTTGCTAACTGGATTAGAGGATCTTCTATTGTTTTCGAACCGCTTGACTGTCATACCTCAAAGTTTGGGACTCAACAGTAGCTTAGAGCAATTGGACTTCACTAACAACCAGTTCACTGGTCAAATTCCACCCAATCTATGCTCTGGAAAGAGATTAAGATTGTTAAATTTAGGTTTGAATCAATTTCAAGGTAGCATACCGTCATATATTGGAACCTGTTTGACTCTTCAGAGGTTGATTTTGAGAAGGAATAATCTCACGGGGGTTCTGCCAACATTTGTGAGAAACCACAGCCTTCGGTACATAGATGCCAGTGAAAATAACCTGAATGGAACAATTCCCTCAAGTTTGGGAAACTGCATCGATGTCACCTCAATTAATTTGTCAAGCAACAAGTTAACAGGTGTTATACCTATAGAGTTGGGAAATCTTGTGAATATTCAAGGTTTGAGCTTGTCTCACAACTTCTTGGAAGGACCTTTGCCATCTTCCCTGTCAAATTGTACCAAACTGGATGAATTTGATGTAGGATTCAATTTATTGAATGGTTCCGTACCTCATAGTTTAGGCAGCTGGAAAGTTATATCCACGTTGATATTAAAAGAGAATCAATTTACTGGAGGCATCCCGGATCTATTATCAGAAATGGAAAGCCTTTCACTGCTAGATCTTGGTGGCAATTTGTTTGGAGGTGAAATTCCCTCATCTATTGGAGCTTTGAAGAATCTGTTCTATTCCTTGAATCTCAGTAACAATGGGTTAACTGGCCAAATACCTTCTGAGCTAGTGAGTCTGGTCAAGCTACAGGAGTTAGATATATCTCACAATAATTTAACTGGAAGTTTAAGAGTTCTTGGCGAACTCGGTTCATCGTTAGTTGAGGTTAACATTTCAGATAACTTCTTCACGGGCCCTGTGCCACAGACATTAATGAAGTTTCTGAATTCTCATTCATCGTCGTTCTTAGGTAACCCTGGACTGTGCATCAGCTGTGATGAACTAGATGGCTCAAGATGCAATAGAAGTAGCAGTATCAAACCTTGTGTTAGTTCTTCAAGCTCTCGTGATAGCTCTCGTCTTAGCAACATACAAATTGCAATGATAGCTCTCGGATCTTCACTCTTTATTATTTTTCTGCTTCTGGGGTTGGCTTATAAGTTTGTTTATAGCAGAAGAAACAAGCAGAAAATTGAGACCCCTGCAGAAAATGGAACAACTTCCTTGCTGGACAAAGTTAGGGAGGCCACTGATAATCTAGACGAGCGTTTCGTCATTGGTAGAGGAGCACATGGAGTTGTTTATAAGGCTTCCCTGGAACCAAATAGGACTTTTGCTGTAAAGAAGCTTACATTTGGAGGTATTAAAGGAGGAAGCCAGAGTATGGTTAGAGAAATTCGAACAGTCGGCAACATCAGGCACCGGAATCTGATCACTTTGGAAGACTTTTGGTTGGGGAAAGACCATGGTCTTTTGCTTTACAGATACCAGCCGAATGGGAGCCTTTATGATGTGTTGCATGATATGAATCCAGCTCCAACTCTAACATGGGAAGTCCGCCATAATATAGCCACTGGTATTGCACATGGATTGGCATATCTCCATTATGACTGTGATCCTCCTATAATACACCGAGACATCAAGCCGCAGAATATACTTCTCGACTCGGAGATGAATCCTTGTATCGCCGATTTCGGTCTTGCGAAGCTGCTGGATCAAACTTCTGCATCAATGGCTTCATCTTCTTTTGCGGGTACGATCGGTTATATTGCACCAGAGAATGCATACTCAGCGACAAAGAGCAAAGCTTCAGACGTTTACAGTTATGGGGTGGTCTTACTGGAGCTGATAACGAGGAAGAAGCCATCAGATCCATCATTTATGGAGGTAGGGAGTATCATGGGTTGGGTCTGGTCGGTTTGGAGCGAGACGCAAGAAATCGAAAGAATTGTTGATCCAAGGCTTGAGGAAGAACTTGTAGATTCTGAGCGGAGGGAGCAGATTAAGCAGGTGCTTATGGTGGCTTTGAGATGCACAGAAAAGGAGCCTAACAAGAGACCTACAATGAGAGATGTTGTCAACCACTTGATTGATTCAAAGACGAGCCATCACATCATAAATGAATAA 3570 42.35 WNASDSTPCSWAGIECDPNHRVVTFNLSGHGVSGQLGPEIAQLTHLLHDFNANDLSGPVPNEIANCSRLQYLDLSQNQFGGKIPVTLGHLANLTYLNFHGNVLTDASENNLNGTIPSSLGNCINVTSINLSTNKLTGVIPIELGNLVNIQGLSLSHNLLEGPLPPSLSNCAKLDEFDVGFNLLNGSVPHSLGSWKVISTLILKENKFSGGIPDLLSEFENLLLLDLGGNLFGGEIPSSIGSLKNLFYSLNLSSNGLTGQIPSELGRHLTNLTYLNFHANVLTGQIPDSLFQIPNFQELYLSENNLNGSIPSNVGNLRQVLYLYLYGNRLSGTIPYSIGNCSQLVDLYLDTNQLVGVLPSSLNNLANLVNLGVSHNNLEGPIPLGSGGCQSLEYVDLSFNGYTGGIPAGLGNCSSLTTFLSINSSLTGHIPSSFGRLNKLSALDLSRNQLSGNIPPELGDCKSLTELNLYTNQLEGRIPSELGLLTGLEDLLLFSNRLTVIPQSLGLNSSLEQLDFTNNQFTGQIPPNLCSGKRLRLLNLGLNQFQGSIPSYIGTCLTLQRLILRRNNLTGVLPTFVRNHSLRYIDASENNLNGTIPSSLGNCIDVTSINLSSNKLTGVIPIELGNLVNIQGLSLSHNFLEGPLPSSLSNCTKLDEFDVGFNLLNGSVPHSLGSWKVISTLILKENQFTGGIPDLLSEMESLSLLDLGGNLFGGEIPSSIGALKNLFYSLNLSNNGLTGQIPSELVSLVKLQELDISHNNLTGSLRVLGELGSSLVEVNISDNFFTGPVPQTLMKFLNSHSSSFLGNPGLCISCDELDGSRCNRSSSIKPCVSSSSSRDSSRLSNIQIAMIALGSSLFIIFLLLGLAYKFVYSRRNKQKIETPAENGTTSLLDKVREATDNLDERFVIGRGAHGVVYKASLEPNRTFAVKKLTFGGIKGGSQSMVREIRTVGNIRHRNLITLEDFWLGKDHGLLLYRYQPNGSLYDVLHDMNPAPTLTWEVRHNIATGIAHGLAYLHYDCDPPIIHRDIKPQNILLDSEMNPCIADFGLAKLLDQTSASMASSSFAGTIGYIAPENAYSATKSKASDVYSYGVVLLELITRKKPSDPSFMEVGSIMGWVWSVWSETQEIERIVDPRLEEELVDSERREQIKQVLMVALRCTEKEPNKRPTMRDVVNHLIDSKTSHHIINE 1189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7219662 7230113 + MC08g0898 Mch8g1023 694644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1023 1189 FunFam Serine/threonine-protein kinase-like protein CCR4 978 1188 - -
Mch8g1023 1189 SMART serkin_6 901 1178 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1023 1189 Pfam Protein kinase domain 906 1176 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1023 1189 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 140 235 - -
Mch8g1023 1189 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 422 1177 - -
Mch8g1023 1189 FunFam Leucine-rich repeat receptor-like protein kinase TDR 249 526 - -
Mch8g1023 1189 Pfam Leucine rich repeat 247 305 IPR001611 GO:0005515(InterPro)
Mch8g1023 1189 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1023 1035 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g1023 1189 ProSiteProfiles Leucine-rich repeat profile. 749 771 IPR001611 GO:0005515(InterPro)
Mch8g1023 1189 SUPERFAMILY RNI-like 248 570 - -
Mch8g1023 1189 PRINTS Leucine-rich repeat signature 747 760 - -
Mch8g1023 1189 PRINTS Leucine-rich repeat signature 439 452 - -
Mch8g1023 1189 Gene3D Phosphorylase Kinase; domain 1 871 977 - -
Mch8g1023 1189 Pfam Leucine rich repeat N-terminal domain 1 17 IPR013210 -
Mch8g1023 1189 Gene3D Ribonuclease Inhibitor 106 187 IPR032675 -
Mch8g1023 1189 Gene3D Ribonuclease Inhibitor 386 481 IPR032675 -
Mch8g1023 1189 Gene3D Ribonuclease Inhibitor 285 385 IPR032675 -
Mch8g1023 1189 ProSitePatterns Protein kinases ATP-binding region signature. 907 930 IPR017441 GO:0005524(InterPro)
Mch8g1023 1189 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 532 819 - -
Mch8g1023 1189 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 866 977 - -
Mch8g1023 1189 Gene3D Ribonuclease Inhibitor 1 105 IPR032675 -
Mch8g1023 1189 Gene3D Ribonuclease Inhibitor 188 284 IPR032675 -
Mch8g1023 1189 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 39 139 - -
Mch8g1023 1189 SMART LRR_typ_2 364 388 IPR003591 -
Mch8g1023 1189 SMART LRR_typ_2 508 531 IPR003591 -
Mch8g1023 1189 SMART LRR_typ_2 242 267 IPR003591 -
Mch8g1023 1189 SMART LRR_typ_2 146 170 IPR003591 -
Mch8g1023 1189 SMART LRR_typ_2 436 460 IPR003591 -
Mch8g1023 1189 SMART LRR_typ_2 268 292 IPR003591 -
Mch8g1023 1189 SMART LRR_typ_2 747 770 IPR003591 -
Mch8g1023 1189 SMART LRR_typ_2 90 113 IPR003591 -
Mch8g1023 1189 SMART LRR_typ_2 698 722 IPR003591 -
Mch8g1023 1189 SMART LRR_typ_2 484 507 IPR003591 -
Mch8g1023 1189 SMART LRR_typ_2 626 650 IPR003591 -
Mch8g1023 1189 SMART LRR_typ_2 316 340 IPR003591 -
Mch8g1023 1189 Pfam Leucine Rich Repeat 509 529 IPR001611 GO:0005515(InterPro)
Mch8g1023 1189 Pfam Leucine Rich Repeat 606 626 IPR001611 GO:0005515(InterPro)
Mch8g1023 1189 Pfam Leucine Rich Repeat 628 650 IPR001611 GO:0005515(InterPro)
Mch8g1023 1189 Pfam Leucine Rich Repeat 390 412 IPR001611 GO:0005515(InterPro)
Mch8g1023 1189 Pfam Leucine Rich Repeat 700 722 IPR001611 GO:0005515(InterPro)
Mch8g1023 1189 Pfam Leucine Rich Repeat 728 747 IPR001611 GO:0005515(InterPro)
Mch8g1023 1189 Pfam Leucine Rich Repeat 462 482 IPR001611 GO:0005515(InterPro)
Mch8g1023 1189 Pfam Leucine Rich Repeat 749 764 IPR001611 GO:0005515(InterPro)
Mch8g1023 1189 Pfam Leucine Rich Repeat 68 90 IPR001611 GO:0005515(InterPro)
Mch8g1023 1189 Pfam Leucine Rich Repeat 580 602 IPR001611 GO:0005515(InterPro)
Mch8g1023 1189 Pfam Leucine Rich Repeat 220 242 IPR001611 GO:0005515(InterPro)
Mch8g1023 1189 Pfam Leucine Rich Repeat 124 146 IPR001611 GO:0005515(InterPro)
Mch8g1023 1189 Pfam Leucine Rich Repeat 321 340 IPR001611 GO:0005515(InterPro)
Mch8g1023 1189 Pfam Leucine Rich Repeat 439 460 IPR001611 GO:0005515(InterPro)
Mch8g1023 1189 Pfam Leucine Rich Repeat 148 170 IPR001611 GO:0005515(InterPro)
Mch8g1023 1189 SUPERFAMILY RNI-like 26 307 - -
Mch8g1023 1189 Gene3D Transferase(Phosphotransferase) domain 1 979 1188 - -
Mch8g1023 1189 Gene3D Ribonuclease Inhibitor 482 825 IPR032675 -
Mch8g1023 1189 ProSiteProfiles Protein kinase domain profile. 901 1187 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1023 1189 SUPERFAMILY Protein kinase-like (PK-like) 884 1177 IPR011009 -
Mch8g1023 1189 SUPERFAMILY RNI-like 500 798 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g1023 Mch-Chr8:7219662 Mch5g0162 Mch-Chr5:1041522 1.67E-54 dispersed
Mch8g1023 Mch-Chr8:7219662 Mch11g0743 Mch-Chr11:5014068 6.84E-57 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77594 PF00069 Pkinase 1.90E-46 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1023 K28089 - csv:101204561 1244.18