Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g1031 | ATGAGCAATTGGTTGGGTTTTTCTCTGACTCCCCACTTGAGAGTCCATCAGGCTTCTGCTTCTGCCTCTGCCGCCGCGGCCGCGGCCGCCGACGAACTGCACAACAACCACAGCCCCTTCCCGCCGCTCATGCCGCTCCGCTCCGACGGATCTCTTTGTATCGACGCCGCCGCCCACGATTGGAGGTCGTACGAGAATGGGGAAGAGGAAAGTCCAAAACTTGAGGACTTTTTGGGCAATTGCTATTCAAACTCGCCGCCCAACGATCAGGGCAGAGGCGGCGGCTATTGCACCCAGAATCCAGAACAGCAGCAGCAGACGCATAATAATAATAATACCTTTATTCAGCCGAATAATAATAATAATAATAATAATAATAATAGTAATAGTAATTATAATTACGATTGCCAGGCGGATCATCAAACTCTAATTCCTAACAATAATAACGCAATTTACAAGTCGTGGTTGGGGCCGACGCCGAGCGCGGAAAATGAGTGCGGGTTTCAGTCGCTGTCTCTCGGCATGAGCCCCACCTCCATAAACGACATCGCTTCACTGCCCTCGCCGCCGCCATTGGCGGCCGATTCCCGGAAACGCCCCGTGGCGGTGGCGGTAGCCAAGCCTCTGCTCAAAGAACCAGTTCCTAGAAAGTCCATCGACACCTTCGGACAGAGGACCTCTCAGTATCGCGGTGTCACAAGGCATAGATGGACAGGGAGATATGAAGCACATTTATGGGACAACAGCTGTAGAAAAGAGGGCCAAACAAGGAAGGGAAGGCAAGGTGGTTATGATAAGGAAGAAAAAGCAGCACGAGCCTATGATTTAGCTGCACTCAAATATTGGGGTCCAACAACTCATATTAATTTCCCGCTGAGCAGTTACGAAAATGAGCTAGAAGAGATGAAGAACATGACCCGACAGGAGTTTGTAGCCAACTTGAGAAGGAAAAGCAGTGGATTCTCAAGAGGAGCTTCAATGTACAGAGGAGTAACAAGACATCATCAACATGGAAGGTGGCAAGCTAGAATTGGAAGGGTTGCGGGAAATAAAGATTTGTACCTTGGCACATTTAGCACACAAGAGGAGGCAGCGGAGGCCTATGACATAGCGGCAATCAAGTTCAGGGGGACGAGTGCAGTGACGAATTTCGACATTGGTAGGTATGATGTGAAGAGGATTTGCTCGAGCTCGACTCTGATTGCTGGTGGCCTTGCGAAGCGTTCACCGTTAAAGGATGGTACTCTCTCGACGACGGAGGACTATACTGCCTGTGCTTCGCCATCGTCCTCGCAGCCTCTCTTGGCCATTGCTGGCGATGGGAGTGCCGAGAGCCACAATGAGTTGGCTGACATGGTTTGGTGTGACAATGCTGCTGCAGATGAGGACAGTCAAGAGAAAGAGAATGCTGCAAAGATGAACAACGACTTGAGTTTGATGGGACCGAGCAACGGGGTGGGCTCATCGAAGTGCTCTCCGGTGCAGAGCAACGAGGAGTTCGGGGTTGGGATCGGGGGAGGTGATCAGTATTCACAAGGCTACTTCTCATTGCAAGGATCAAAATATGAAGATGGGAATAATGGGAGTGATCAGAGTAGGCAGGTGGGAAATAGTGTAACATTGGCTCATCATCATGTTCCAATGTTTGCTTTATGGAACGAATGA | 1665 | 50.09 | MSNWLGFSLTPHLRVHQASASASAAAAAAADELHNNHSPFPPLMPLRSDGSLCIDAAAHDWRSYENGEEESPKLEDFLGNCYSNSPPNDQGRGGGYCTQNPEQQQQTHNNNNTFIQPNNNNNNNNNNSNSNYNYDCQADHQTLIPNNNNAIYKSWLGPTPSAENECGFQSLSLGMSPTSINDIASLPSPPPLAADSRKRPVAVAVAKPLLKEPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQGGYDKEEKAARAYDLAALKYWGPTTHINFPLSSYENELEEMKNMTRQEFVANLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDIGRYDVKRICSSSTLIAGGLAKRSPLKDGTLSTTEDYTACASPSSSQPLLAIAGDGSAESHNELADMVWCDNAAADEDSQEKENAAKMNNDLSLMGPSNGVGSSKCSPVQSNEEFGVGIGGGDQYSQGYFSLQGSKYEDGNNGSDQSRQVGNSVTLAHHHVPMFALWNE | 554 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 7280075 | 7283847 | - | MC08g0905 | Mch8g1031 | 694652 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g1031 | 554 | Gene3D | AP2/ERF domain | 227 | 293 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch8g1031 | 554 | Gene3D | AP2/ERF domain | 327 | 386 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch8g1031 | 554 | CDD | AP2 | 227 | 293 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch8g1031 | 554 | FunFam | AP2-like ethylene-responsive transcription factor | 326 | 387 | - | - | |
Mch8g1031 | 554 | ProSiteProfiles | AP2/ERF domain profile. | 228 | 291 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch8g1031 | 554 | CDD | AP2 | 326 | 386 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch8g1031 | 554 | SMART | rav1_2 | 327 | 391 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch8g1031 | 554 | SMART | rav1_2 | 228 | 297 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch8g1031 | 554 | SUPERFAMILY | DNA-binding domain | 326 | 386 | IPR016177 | GO:0003677(InterPro) | |
Mch8g1031 | 554 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 120 | 443 | - | - | |
Mch8g1031 | 554 | FunFam | AP2-like ethylene-responsive transcription factor ANT | 227 | 293 | - | - | |
Mch8g1031 | 554 | MobiDBLite | consensus disorder prediction | 81 | 131 | - | - | |
Mch8g1031 | 554 | MobiDBLite | consensus disorder prediction | 64 | 131 | - | - | |
Mch8g1031 | 554 | SUPERFAMILY | DNA-binding domain | 227 | 293 | IPR016177 | GO:0003677(InterPro) | |
Mch8g1031 | 554 | PRINTS | Ethylene responsive element binding protein signature | 367 | 387 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch8g1031 | 554 | PRINTS | Ethylene responsive element binding protein signature | 229 | 240 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch8g1031 | 554 | Pfam | AP2 domain | 328 | 377 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch8g1031 | 554 | Pfam | AP2 domain | 228 | 283 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Mch8g1031 | 554 | ProSiteProfiles | AP2/ERF domain profile. | 327 | 385 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g0385 | Mch-Chr11:2405751 | Mch8g1031 | Mch-Chr8:7280075 | 7.49E-117 | dispersed | |
Mch1g1314 | Mch-Chr1:15217897 | Mch8g1031 | Mch-Chr8:7280075 | 9.44E-112 | dispersed | |
Mch8g0606 | Mch-Chr8:4348038 | Mch8g1031 | Mch-Chr8:7280075 | 1.99E-118 | dispersed | |
Mch8g1031 | Mch-Chr8:7280075 | Mch9g0483 | Mch-Chr9:3560491 | 4.11E-77 | dispersed | |
Mch10g0610 | Mch-Chr10:4122428 | Mch8g1031 | Mch-Chr8:7280075 | 2.03E-103 | transposed | |
Mch2g0127 | Mch-Chr2:962390 | Mch8g1031 | Mch-Chr8:7280075 | 2.55E-108 | transposed | |
Mch6g0520 | Mch-Chr6:3525336 | Mch8g1031 | Mch-Chr8:7280075 | 1.62E-110 | transposed | |
Mch8g1623 | Mch-Chr8:13240220 | Mch8g1031 | Mch-Chr8:7280075 | 9.33E-73 | transposed | |
Mch8g2038 | Mch-Chr8:22867643 | Mch8g1031 | Mch-Chr8:7280075 | 5.72E-71 | transposed | |
Mch8g2499 | Mch-Chr8:27903072 | Mch8g1031 | Mch-Chr8:7280075 | 7.47E-113 | transposed | |
Mch5g0740 | Mch-Chr5:4981497 | Mch8g1031 | Mch-Chr8:7280075 | 2.77E-07 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
43841 | PF00847 | AP2 | 1.10E-09 | CL0081 | Mch | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch8g1031 | K09285 | - | csv:101205762 | 761.911 |