Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1031 ATGAGCAATTGGTTGGGTTTTTCTCTGACTCCCCACTTGAGAGTCCATCAGGCTTCTGCTTCTGCCTCTGCCGCCGCGGCCGCGGCCGCCGACGAACTGCACAACAACCACAGCCCCTTCCCGCCGCTCATGCCGCTCCGCTCCGACGGATCTCTTTGTATCGACGCCGCCGCCCACGATTGGAGGTCGTACGAGAATGGGGAAGAGGAAAGTCCAAAACTTGAGGACTTTTTGGGCAATTGCTATTCAAACTCGCCGCCCAACGATCAGGGCAGAGGCGGCGGCTATTGCACCCAGAATCCAGAACAGCAGCAGCAGACGCATAATAATAATAATACCTTTATTCAGCCGAATAATAATAATAATAATAATAATAATAATAGTAATAGTAATTATAATTACGATTGCCAGGCGGATCATCAAACTCTAATTCCTAACAATAATAACGCAATTTACAAGTCGTGGTTGGGGCCGACGCCGAGCGCGGAAAATGAGTGCGGGTTTCAGTCGCTGTCTCTCGGCATGAGCCCCACCTCCATAAACGACATCGCTTCACTGCCCTCGCCGCCGCCATTGGCGGCCGATTCCCGGAAACGCCCCGTGGCGGTGGCGGTAGCCAAGCCTCTGCTCAAAGAACCAGTTCCTAGAAAGTCCATCGACACCTTCGGACAGAGGACCTCTCAGTATCGCGGTGTCACAAGGCATAGATGGACAGGGAGATATGAAGCACATTTATGGGACAACAGCTGTAGAAAAGAGGGCCAAACAAGGAAGGGAAGGCAAGGTGGTTATGATAAGGAAGAAAAAGCAGCACGAGCCTATGATTTAGCTGCACTCAAATATTGGGGTCCAACAACTCATATTAATTTCCCGCTGAGCAGTTACGAAAATGAGCTAGAAGAGATGAAGAACATGACCCGACAGGAGTTTGTAGCCAACTTGAGAAGGAAAAGCAGTGGATTCTCAAGAGGAGCTTCAATGTACAGAGGAGTAACAAGACATCATCAACATGGAAGGTGGCAAGCTAGAATTGGAAGGGTTGCGGGAAATAAAGATTTGTACCTTGGCACATTTAGCACACAAGAGGAGGCAGCGGAGGCCTATGACATAGCGGCAATCAAGTTCAGGGGGACGAGTGCAGTGACGAATTTCGACATTGGTAGGTATGATGTGAAGAGGATTTGCTCGAGCTCGACTCTGATTGCTGGTGGCCTTGCGAAGCGTTCACCGTTAAAGGATGGTACTCTCTCGACGACGGAGGACTATACTGCCTGTGCTTCGCCATCGTCCTCGCAGCCTCTCTTGGCCATTGCTGGCGATGGGAGTGCCGAGAGCCACAATGAGTTGGCTGACATGGTTTGGTGTGACAATGCTGCTGCAGATGAGGACAGTCAAGAGAAAGAGAATGCTGCAAAGATGAACAACGACTTGAGTTTGATGGGACCGAGCAACGGGGTGGGCTCATCGAAGTGCTCTCCGGTGCAGAGCAACGAGGAGTTCGGGGTTGGGATCGGGGGAGGTGATCAGTATTCACAAGGCTACTTCTCATTGCAAGGATCAAAATATGAAGATGGGAATAATGGGAGTGATCAGAGTAGGCAGGTGGGAAATAGTGTAACATTGGCTCATCATCATGTTCCAATGTTTGCTTTATGGAACGAATGA 1665 50.09 MSNWLGFSLTPHLRVHQASASASAAAAAAADELHNNHSPFPPLMPLRSDGSLCIDAAAHDWRSYENGEEESPKLEDFLGNCYSNSPPNDQGRGGGYCTQNPEQQQQTHNNNNTFIQPNNNNNNNNNNSNSNYNYDCQADHQTLIPNNNNAIYKSWLGPTPSAENECGFQSLSLGMSPTSINDIASLPSPPPLAADSRKRPVAVAVAKPLLKEPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQGGYDKEEKAARAYDLAALKYWGPTTHINFPLSSYENELEEMKNMTRQEFVANLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDIGRYDVKRICSSSTLIAGGLAKRSPLKDGTLSTTEDYTACASPSSSQPLLAIAGDGSAESHNELADMVWCDNAAADEDSQEKENAAKMNNDLSLMGPSNGVGSSKCSPVQSNEEFGVGIGGGDQYSQGYFSLQGSKYEDGNNGSDQSRQVGNSVTLAHHHVPMFALWNE 554
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7280075 7283847 - MC08g0905 Mch8g1031 694652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1031 554 Gene3D AP2/ERF domain 227 293 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch8g1031 554 Gene3D AP2/ERF domain 327 386 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch8g1031 554 CDD AP2 227 293 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch8g1031 554 FunFam AP2-like ethylene-responsive transcription factor 326 387 - -
Mch8g1031 554 ProSiteProfiles AP2/ERF domain profile. 228 291 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch8g1031 554 CDD AP2 326 386 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch8g1031 554 SMART rav1_2 327 391 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch8g1031 554 SMART rav1_2 228 297 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch8g1031 554 SUPERFAMILY DNA-binding domain 326 386 IPR016177 GO:0003677(InterPro)
Mch8g1031 554 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 120 443 - -
Mch8g1031 554 FunFam AP2-like ethylene-responsive transcription factor ANT 227 293 - -
Mch8g1031 554 MobiDBLite consensus disorder prediction 81 131 - -
Mch8g1031 554 MobiDBLite consensus disorder prediction 64 131 - -
Mch8g1031 554 SUPERFAMILY DNA-binding domain 227 293 IPR016177 GO:0003677(InterPro)
Mch8g1031 554 PRINTS Ethylene responsive element binding protein signature 367 387 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch8g1031 554 PRINTS Ethylene responsive element binding protein signature 229 240 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch8g1031 554 Pfam AP2 domain 328 377 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch8g1031 554 Pfam AP2 domain 228 283 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch8g1031 554 ProSiteProfiles AP2/ERF domain profile. 327 385 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0385 Mch-Chr11:2405751 Mch8g1031 Mch-Chr8:7280075 7.49E-117 dispersed
Mch1g1314 Mch-Chr1:15217897 Mch8g1031 Mch-Chr8:7280075 9.44E-112 dispersed
Mch8g0606 Mch-Chr8:4348038 Mch8g1031 Mch-Chr8:7280075 1.99E-118 dispersed
Mch8g1031 Mch-Chr8:7280075 Mch9g0483 Mch-Chr9:3560491 4.11E-77 dispersed
Mch10g0610 Mch-Chr10:4122428 Mch8g1031 Mch-Chr8:7280075 2.03E-103 transposed
Mch2g0127 Mch-Chr2:962390 Mch8g1031 Mch-Chr8:7280075 2.55E-108 transposed
Mch6g0520 Mch-Chr6:3525336 Mch8g1031 Mch-Chr8:7280075 1.62E-110 transposed
Mch8g1623 Mch-Chr8:13240220 Mch8g1031 Mch-Chr8:7280075 9.33E-73 transposed
Mch8g2038 Mch-Chr8:22867643 Mch8g1031 Mch-Chr8:7280075 5.72E-71 transposed
Mch8g2499 Mch-Chr8:27903072 Mch8g1031 Mch-Chr8:7280075 7.47E-113 transposed
Mch5g0740 Mch-Chr5:4981497 Mch8g1031 Mch-Chr8:7280075 2.77E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43841 PF00847 AP2 1.10E-09 CL0081 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1031 K09285 - csv:101205762 761.911