Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1055 ATGGAGAGGAAGACTTATCCGATAGGACAAGAGTTCTATACTCTGTATGAGGAGGTTGGGCAGGGCGTGAGTGCTGCAGTCCACCGTGCTCTGTGTAAGCCTCTCGACGAGATCGTCGCCATCAAGATCCTCGATTTTGAGCGCGAAAATTGTGATCTGGCTAGCATTTATCGTGAAGTACAGACAATGATCTTGGTTGACCACCCCAATGTTCTTAAATCACACTGCTCCTTTGTAAATGGCCACAATTTGTGGATTGTTATGCCCTACATGGCTGGGGGTTCATGTCTTCACATATTGAAGGCTGCATATCCTGATGGTTTTGAGGAAGTGGCCATAGCAACTATATTACGAGAAGTATTGAAGGGCGTTGTATATCTTCATAGTCATGGACATATACATCGGGATGTAAAAGCAGGGAATATTCTTATTGATTCACGAGGCGCAATCAAGCTAGGGGATTTTGGTGTTTCTGCTTGCCTTTTTGATTCAGGCGATAGGCAACGTGCGAGGAATACATTCGTGGGGACACCTTGCTGGATGGCACCTGAGGTTATGGAGCAACTAAATGGTTATGACTTCAAGGCTGACATCTGGTCTTTTGCCATAACTGGTTTAGAGCTTGCCCATGGCCATGCTCCTTTCTCAAAATATCCTCCAATGAAGGTTCTGATGATGACCTTGCAAAATGCACCTCCAGGCCTTGATTATGAGAGGGATAAAAAATTTTCGAAGTCTTTTAAGCAGATGATTGCTAGTTGCTTGGTAAAAGATCCTTCAAAACGACCTTCTGCAAGTAAGCTGCTAAAGCATTCATTTTTTAAGCAAGCCCGATCAAGTGATTACATTGCACGTACCCTTTTGGAAGGGTTGCCTGTTCTTGGTGATCGTATAAAGGCACTTAAGAGAAAGGAAGAAGATATGCTTGCACAAAAGAAGATGCCAGATGGAAAGAAGGAAGAATTGTCACAGAGTGAATATAAACGAGGGATTAGTGGATGGAACTTCAACCTTGATGATTTAAAGGCTCAGGCAGCTCTGGTTCAGGAATTTGAAGAGTCCATAAGTGAAATCTGTGAAGTAGGGAGCTCCAATTGCTTGTCTGCACTTGATGTGCAAGAAAAGAAATTACAATGTCAAAATTCTACAGAAATTTCAGATATCGAAGAGAATGGCATGATGCGGAGTCAATCAGTTCCTTCACCCTCCATTGACTTCAAAGCTAATGACACAACAGATGGTAGTAAAAAAACTATCAATGATTCAACAATTTTTGGTTCTTGCAATCAACATCATTCTTCGCCCCGCAGTGATAATCAACACGAGAATGGTTCCAGTGAAGAACTTCATTTGGAGAACAGCAAAAGAACTTTGGGGAATACTCCTAATACTAGCCATAGAAGAAGTATTTCTTCTAATATCACTATTCAACAAGAAGCCAATTCACCACTAACTAAACGGGAGAGTTATGAGATAGAAAAGAATGTTGCAAATGGCGGTGTTGCAATAGGAATAGTTCCTCAGGCAGCGGTAGATGACGTGCTTCATGAATCGCATTCTAAAGATTCCAAGTCATTAAGTCCTGCAACAAATGATGAGGAACAGGATGAGAAAGCAAAGGCACCAGTTATTCAGCAGAAAGGGCGTTTCAAAGTTACTTCGGAGAATGTTGATGTGGATAGGGTAGCTGGAGCCCCTATTCTGCAAAAAAGTCACAGTATGCAGGTTGGTAATTTGAGGATGCCGGTTATGCAGGTGCTTACCTCGAATTCCGCTACTACTACTTCTCTACCTTCTAATCTACCAACACCTGCACTGTCACCACCTCTACCTTCATCGTTGGATGCTATACCAATTTATCCTAGATCTTCTATGTTTCCAGTGTTGCAATCTGTTTTGCAGGCAAATATTCTTCAAAGGGATGATATTTTGACTCTAATGAGGCAAGTCTCAATCGGAGAATTTCCAGCTGATAGCACAGTTGATGTCTCAACGGCACACATAGTTGCAGTGGAGAAATCGTTGCTTGAAGCAGCTCACGAAAGGGAGAAGGATTTACTCAACGAAATAACTGACTTACAGTGGAGGATATTACGTGCGAAAGATGAAATCCAGAGATTAAAATCAAACAATGCTGCAGGTTAA 2145 42.05 MERKTYPIGQEFYTLYEEVGQGVSAAVHRALCKPLDEIVAIKILDFERENCDLASIYREVQTMILVDHPNVLKSHCSFVNGHNLWIVMPYMAGGSCLHILKAAYPDGFEEVAIATILREVLKGVVYLHSHGHIHRDVKAGNILIDSRGAIKLGDFGVSACLFDSGDRQRARNTFVGTPCWMAPEVMEQLNGYDFKADIWSFAITGLELAHGHAPFSKYPPMKVLMMTLQNAPPGLDYERDKKFSKSFKQMIASCLVKDPSKRPSASKLLKHSFFKQARSSDYIARTLLEGLPVLGDRIKALKRKEEDMLAQKKMPDGKKEELSQSEYKRGISGWNFNLDDLKAQAALVQEFEESISEICEVGSSNCLSALDVQEKKLQCQNSTEISDIEENGMMRSQSVPSPSIDFKANDTTDGSKKTINDSTIFGSCNQHHSSPRSDNQHENGSSEELHLENSKRTLGNTPNTSHRRSISSNITIQQEANSPLTKRESYEIEKNVANGGVAIGIVPQAAVDDVLHESHSKDSKSLSPATNDEEQDEKAKAPVIQQKGRFKVTSENVDVDRVAGAPILQKSHSMQVGNLRMPVMQVLTSNSATTTSLPSNLPTPALSPPLPSSLDAIPIYPRSSMFPVLQSVLQANILQRDDILTLMRQVSIGEFPADSTVDVSTAHIVAVEKSLLEAAHEREKDLLNEITDLQWRILRAKDEIQRLKSNNAAG 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7413828 7422084 + MC08g0929 Mch8g1055 694676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1055 714 Coils Coil 676 710 - -
Mch8g1055 714 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524(InterPro)
Mch8g1055 714 MobiDBLite consensus disorder prediction 387 434 - -
Mch8g1055 714 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1055 714 MobiDBLite consensus disorder prediction 515 542 - -
Mch8g1055 714 MobiDBLite consensus disorder prediction 387 487 - -
Mch8g1055 714 Gene3D Transferase(Phosphotransferase) domain 1 94 326 - -
Mch8g1055 714 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 712 IPR047173 GO:0043539(InterPro)
Mch8g1055 714 FunFam serine/threonine-protein kinase BLUS1 isoform X1 94 327 - -
Mch8g1055 714 CDD STKc_OSR1_SPAK 13 274 - -
Mch8g1055 714 MobiDBLite consensus disorder prediction 455 485 - -
Mch8g1055 714 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Mch8g1055 714 Pfam Protein kinase domain 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1055 714 SUPERFAMILY Protein kinase-like (PK-like) 13 275 IPR011009 -
Mch8g1055 714 FunFam Serine/threonine-protein kinase BLUS1 2 90 - -
Mch8g1055 714 SMART serkin_6 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1055 714 MobiDBLite consensus disorder prediction 435 454 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g1055 Mch-Chr8:7413828 Mch8g1508 Mch-Chr8:11515694 3.69E-176 dispersed
Mch8g1055 Mch-Chr8:7413828 Mch4g2219 Mch-Chr4:23817061 6.54E-186 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77595 PF00069 Pkinase 1.60E-58 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1055 K08835 - csv:101211076 1112.83