Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g1055 ATGGAGAGGAAGACTTATCCGATAGGACAAGAGTTCTATACTCTGTATGAGGAGGTTGGGCAGGGCGTGAGTGCTGCAGTCCACCGTGCTCTGTGTAAGCCTCTCGACGAGATCGTCGCCATCAAGATCCTCGATTTTGAGCGCGAAAATTGTGATCTGGCTAGCATTTATCGTGAAGTACAGACAATGATCTTGGTTGACCACCCCAATGTTCTTAAATCACACTGCTCCTTTGTAAATGGCCACAATTTGTGGATTGTTATGCCCTACATGGCTGGGGGTTCATGTCTTCACATATTGAAGGCTGCATATCCTGATGGTTTTGAGGAAGTGGCCATAGCAACTATATTACGAGAAGTATTGAAGGGCGTTGTATATCTTCATAGTCATGGACATATACATCGGGATGTAAAAGCAGGGAATATTCTTATTGATTCACGAGGCGCAATCAAGCTAGGGGATTTTGGTGTTTCTGCTTGCCTTTTTGATTCAGGCGATAGGCAACGTGCGAGGAATACATTCGTGGGGACACCTTGCTGGATGGCACCTGAGGTTATGGAGCAACTAAATGGTTATGACTTCAAGGCTGACATCTGGTCTTTTGCCATAACTGGTTTAGAGCTTGCCCATGGCCATGCTCCTTTCTCAAAATATCCTCCAATGAAGGTTCTGATGATGACCTTGCAAAATGCACCTCCAGGCCTTGATTATGAGAGGGATAAAAAATTTTCGAAGTCTTTTAAGCAGATGATTGCTAGTTGCTTGGTAAAAGATCCTTCAAAACGACCTTCTGCAAGTAAGCTGCTAAAGCATTCATTTTTTAAGCAAGCCCGATCAAGTGATTACATTGCACGTACCCTTTTGGAAGGGTTGCCTGTTCTTGGTGATCGTATAAAGGCACTTAAGAGAAAGGAAGAAGATATGCTTGCACAAAAGAAGATGCCAGATGGAAAGAAGGAAGAATTGTCACAGAGTGAATATAAACGAGGGATTAGTGGATGGAACTTCAACCTTGATGATTTAAAGGCTCAGGCAGCTCTGGTTCAGGAATTTGAAGAGTCCATAAGTGAAATCTGTGAAGTAGGGAGCTCCAATTGCTTGTCTGCACTTGATGTGCAAGAAAAGAAATTACAATGTCAAAATTCTACAGAAATTTCAGATATCGAAGAGAATGGCATGATGCGGAGTCAATCAGTTCCTTCACCCTCCATTGACTTCAAAGCTAATGACACAACAGATGGTAGTAAAAAAACTATCAATGATTCAACAATTTTTGGTTCTTGCAATCAACATCATTCTTCGCCCCGCAGTGATAATCAACACGAGAATGGTTCCAGTGAAGAACTTCATTTGGAGAACAGCAAAAGAACTTTGGGGAATACTCCTAATACTAGCCATAGAAGAAGTATTTCTTCTAATATCACTATTCAACAAGAAGCCAATTCACCACTAACTAAACGGGAGAGTTATGAGATAGAAAAGAATGTTGCAAATGGCGGTGTTGCAATAGGAATAGTTCCTCAGGCAGCGGTAGATGACGTGCTTCATGAATCGCATTCTAAAGATTCCAAGTCATTAAGTCCTGCAACAAATGATGAGGAACAGGATGAGAAAGCAAAGGCACCAGTTATTCAGCAGAAAGGGCGTTTCAAAGTTACTTCGGAGAATGTTGATGTGGATAGGGTAGCTGGAGCCCCTATTCTGCAAAAAAGTCACAGTATGCAGGTTGGTAATTTGAGGATGCCGGTTATGCAGGTGCTTACCTCGAATTCCGCTACTACTACTTCTCTACCTTCTAATCTACCAACACCTGCACTGTCACCACCTCTACCTTCATCGTTGGATGCTATACCAATTTATCCTAGATCTTCTATGTTTCCAGTGTTGCAATCTGTTTTGCAGGCAAATATTCTTCAAAGGGATGATATTTTGACTCTAATGAGGCAAGTCTCAATCGGAGAATTTCCAGCTGATAGCACAGTTGATGTCTCAACGGCACACATAGTTGCAGTGGAGAAATCGTTGCTTGAAGCAGCTCACGAAAGGGAGAAGGATTTACTCAACGAAATAACTGACTTACAGTGGAGGATATTACGTGCGAAAGATGAAATCCAGAGATTAAAATCAAACAATGCTGCAGGTTAA 2145 42.05 MERKTYPIGQEFYTLYEEVGQGVSAAVHRALCKPLDEIVAIKILDFERENCDLASIYREVQTMILVDHPNVLKSHCSFVNGHNLWIVMPYMAGGSCLHILKAAYPDGFEEVAIATILREVLKGVVYLHSHGHIHRDVKAGNILIDSRGAIKLGDFGVSACLFDSGDRQRARNTFVGTPCWMAPEVMEQLNGYDFKADIWSFAITGLELAHGHAPFSKYPPMKVLMMTLQNAPPGLDYERDKKFSKSFKQMIASCLVKDPSKRPSASKLLKHSFFKQARSSDYIARTLLEGLPVLGDRIKALKRKEEDMLAQKKMPDGKKEELSQSEYKRGISGWNFNLDDLKAQAALVQEFEESISEICEVGSSNCLSALDVQEKKLQCQNSTEISDIEENGMMRSQSVPSPSIDFKANDTTDGSKKTINDSTIFGSCNQHHSSPRSDNQHENGSSEELHLENSKRTLGNTPNTSHRRSISSNITIQQEANSPLTKRESYEIEKNVANGGVAIGIVPQAAVDDVLHESHSKDSKSLSPATNDEEQDEKAKAPVIQQKGRFKVTSENVDVDRVAGAPILQKSHSMQVGNLRMPVMQVLTSNSATTTSLPSNLPTPALSPPLPSSLDAIPIYPRSSMFPVLQSVLQANILQRDDILTLMRQVSIGEFPADSTVDVSTAHIVAVEKSLLEAAHEREKDLLNEITDLQWRILRAKDEIQRLKSNNAAG 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7413828 7422084 + MC08g0929 Mch8g1055 694676

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g1055 714 Coils Coil 676 710 - -
Mch8g1055 714 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524(InterPro)
Mch8g1055 714 MobiDBLite consensus disorder prediction 387 434 - -
Mch8g1055 714 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1055 714 MobiDBLite consensus disorder prediction 515 542 - -
Mch8g1055 714 MobiDBLite consensus disorder prediction 387 487 - -
Mch8g1055 714 Gene3D Transferase(Phosphotransferase) domain 1 94 326 - -
Mch8g1055 714 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 712 IPR047173 GO:0043539(InterPro)
Mch8g1055 714 FunFam serine/threonine-protein kinase BLUS1 isoform X1 94 327 - -
Mch8g1055 714 CDD STKc_OSR1_SPAK 13 274 - -
Mch8g1055 714 MobiDBLite consensus disorder prediction 455 485 - -
Mch8g1055 714 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Mch8g1055 714 Pfam Protein kinase domain 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1055 714 SUPERFAMILY Protein kinase-like (PK-like) 13 275 IPR011009 -
Mch8g1055 714 FunFam Serine/threonine-protein kinase BLUS1 2 90 - -
Mch8g1055 714 SMART serkin_6 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g1055 714 MobiDBLite consensus disorder prediction 435 454 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g1055 K08835 - - csv:101211076 1112.83
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g1055 Mch-Chr8:7413828 Mch8g1508 Mch-Chr8:11515694 3.69E-176 dispersed
Mch8g1055 Mch-Chr8:7413828 Mch4g2219 Mch-Chr4:23817061 6.54E-186 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Mch11g1051 . 1 686 MAP Kinase Kinase Kinase Kinase AT1G53165 62.2 6.8e-216 747.3
Mch11g1051 . 1 686 MAP Kinase Kinase Kinase Kinase AT3G15220 63.0 1.7e-222 769.2
Mch9g2066 . 268 533 MAP Kinase Kinase Kinase Kinase AT3G15220 51.3 4.3e-69 259.6
Mch9g2066 . 1 845 MAP Kinase Kinase Kinase Kinase AT1G69220 57.6 7.7e-243 837.0
Mch11g1051 . 23 267 MAP Kinase Kinase Kinase Kinase AT1G69220 52.0 6.2e-67 252.7
Mch4g2219 . 1 659 MAP Kinase Kinase Kinase Kinase AT5G14720 67.1 7.6e-252 866.7
Mch8g1508 . 24 630 MAP Kinase Kinase Kinase Kinase AT5G14720 55.1 7.2e-194 674.1
Mch10g1743 . 9 726 MAP Kinase Kinase Kinase Kinase AT4G24100 63.6 1.3e-241 832.8
Mch10g1743 . 11 727 MAP Kinase Kinase Kinase Kinase AT4G10730 63.9 6.0e-244 840.5
Mch8g1055 . 4 494 MAP Kinase Kinase Kinase Kinase AT1G70430 51.9 3.7e-133 472.2
Mch10g1743 . 5 353 MAP Kinase Kinase Kinase Kinase AT1G70430 59.0 9.8e-118 421.0
Mch8g1055 . 1 696 MAP Kinase Kinase Kinase Kinase AT1G79640 59.1 6.2e-214 740.7
Mch8g1508 . 30 377 MAP Kinase Kinase Kinase Kinase AT1G79640 67.8 1.5e-143 506.9
Mch4g2219 . 1 328 MAP Kinase Kinase Kinase Kinase AT1G23700 59.8 1.7e-104 376.7
Mch8g1508 . 24 350 MAP Kinase Kinase Kinase Kinase AT1G23700 56.1 1.3e-96 350.5
Mch8g1055 . 6 324 MAP Kinase Kinase Kinase Kinase AT1G23700 52.5 1.0e-88 324.3
Mch10g1743 . 15 306 MAP Kinase Kinase Kinase Kinase AT1G23700 50.8 6.3e-75 278.5
Mch5g0066 . 19 500 MAP Kinase Kinase Kinase Kinase AT4G14480 55.5 3.9e-141 498.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002203 1 4 3 2 3 1 2 1 1 2 1 1 3 2 2 3 2 5 2 1 2 2 2 2 1 1 2 4 2 2 62
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77595 PF00069 Pkinase 1.60E-58 CL0016 Mch PK